BQ623598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RH34_ARATH (DEAD-box ATP-dependent RNA helicase 34 OS=Arabidopsis thaliana GN=RH34 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 2.214e-28 Identity = 57/145 (39.31%), Postives = 91/145 (62.76%), Query Frame = 2 Query: 74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIP 508 K+ K L L+ +L INQ+IIFCN+ +V+ L +K+ + +H Q R+ + + FR+ R L+ +D++ RGID+Q V+ VIN+D P N E Y+HR+GR+GRFG G+A+N + D +L IE+ GT+I+++P Sbjct: 244 KEEWKFDTLCDLYGRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKDLKDIERHYGTKIREMP 388 HSP 2 Score: 27.335 bits (59), Expect = 2.214e-28 Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 1 Query: 28 DELTLKGITQYYAFVEERQ 84 DELTL+GI QYY V++ + Sbjct: 228 DELTLEGIKQYYVDVDKEE 246
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A2_ARATH (Eukaryotic initiation factor 4A-2 OS=Arabidopsis thaliana GN=TIF4A-2 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.880e-28 Identity = 58/148 (39.19%), Postives = 92/148 (62.16%), Query Frame = 2 Query: 74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517 K+ K L L+ L I QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V++VINFD P E YLHR+GRSGRFG G+A+N +T +D+ L+ I++ ++++P ++ Sbjct: 261 KEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQKFYNVVVEELPSNV 408 HSP 2 Score: 26.1794 bits (56), Expect = 2.880e-28 Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 1 Query: 28 DELTLKGITQYYAFVEE 78 DELTL+GI Q+Y VE+ Sbjct: 245 DELTLEGIKQFYVNVEK 261
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A1_PONAB (Eukaryotic initiation factor 4A-I OS=Pongo abelii GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.881e-28 Identity = 59/148 (39.86%), Postives = 92/148 (62.16%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529 K L L+ L I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR+GR GRFG G+A+N++T ED+ L IE T I+++P ++ I Sbjct: 259 KLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406 HSP 2 Score: 24.6386 bits (52), Expect = 2.881e-28 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 1 Query: 28 DELTLKGITQYYAFVEERQ 84 +ELTL+GI Q+Y VE + Sbjct: 239 EELTLEGIRQFYINVEREE 257
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A1_MOUSE (Eukaryotic initiation factor 4A-I OS=Mus musculus GN=Eif4a1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.881e-28 Identity = 59/148 (39.86%), Postives = 92/148 (62.16%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529 K L L+ L I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR+GR GRFG G+A+N++T ED+ L IE T I+++P ++ I Sbjct: 259 KLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406 HSP 2 Score: 24.6386 bits (52), Expect = 2.881e-28 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 1 Query: 28 DELTLKGITQYYAFVEERQ 84 +ELTL+GI Q+Y VE + Sbjct: 239 EELTLEGIRQFYINVEREE 257
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A1_HUMAN (Eukaryotic initiation factor 4A-I OS=Homo sapiens GN=EIF4A1 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.881e-28 Identity = 59/148 (39.86%), Postives = 92/148 (62.16%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529 K L L+ L I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR+GR GRFG G+A+N++T ED+ L IE T I+++P ++ I Sbjct: 259 KLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406 HSP 2 Score: 24.6386 bits (52), Expect = 2.881e-28 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 1 Query: 28 DELTLKGITQYYAFVEERQ 84 +ELTL+GI Q+Y VE + Sbjct: 239 EELTLEGIRQFYINVEREE 257
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A1_BOVIN (Eukaryotic initiation factor 4A-I OS=Bos taurus GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.881e-28 Identity = 59/148 (39.86%), Postives = 92/148 (62.16%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529 K L L+ L I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR+GR GRFG G+A+N++T ED+ L IE T I+++P ++ I Sbjct: 259 KLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406 HSP 2 Score: 24.6386 bits (52), Expect = 2.881e-28 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 1 Query: 28 DELTLKGITQYYAFVEERQ 84 +ELTL+GI Q+Y VE + Sbjct: 239 EELTLEGIRQFYINVEREE 257
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A1_RABIT (Eukaryotic initiation factor 4A-I (Fragment) OS=Oryctolagus cuniculus GN=EIF4A1 PE=1 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 2.882e-28 Identity = 59/148 (39.86%), Postives = 92/148 (62.16%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529 K L L+ L I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR+GR GRFG G+A+N++T ED+ L IE T I+++P ++ I Sbjct: 251 KLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 398 HSP 2 Score: 24.6386 bits (52), Expect = 2.882e-28 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 1 Query: 28 DELTLKGITQYYAFVEERQ 84 +ELTL+GI Q+Y VE + Sbjct: 231 EELTLEGIRQFYINVEREE 249
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: FAL1_CHAGB (ATP-dependent RNA helicase FAL1 OS=Chaetomium globosum GN=FAL1 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 2.882e-28 Identity = 56/126 (44.44%), Postives = 81/126 (64.29%), Query Frame = 2 Query: 74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYED 451 K+ K L L+ L I Q++IFCN+ +V+ L K+ E ++ +H M Q R+ + DFR G R L+ TD++ RGID+Q V++VIN+D P N E Y+HR+GRSGRFG G+A+N +T ED Sbjct: 249 KEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSED 374 HSP 2 Score: 25.409 bits (54), Expect = 2.882e-28 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 1 Query: 28 DELTLKGITQYYAFVEE 78 DELTL+G+ QY+ VE+ Sbjct: 233 DELTLEGLKQYFIAVEK 249
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A1_ARATH (Eukaryotic initiation factor 4A-1 OS=Arabidopsis thaliana GN=TIF4A-1 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.749e-28 Identity = 58/148 (39.19%), Postives = 91/148 (61.49%), Query Frame = 2 Query: 74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517 K+ K L L+ L I QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V++VINFD P E YLHR+GRSGRFG G+A+N +T +D L+ I++ ++++P ++ Sbjct: 261 KEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVVEELPSNV 408 HSP 2 Score: 26.9498 bits (58), Expect = 3.749e-28 Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 1 Query: 28 DELTLKGITQYYAFVEERQ 84 DELTL+GI Q+Y VE+ + Sbjct: 245 DELTLEGIKQFYVNVEKEE 263
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RH2_ARATH (DEAD-box ATP-dependent RNA helicase 2 OS=Arabidopsis thaliana GN=RH2 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 6.300e-28 Identity = 60/152 (39.47%), Postives = 96/152 (63.16%), Query Frame = 2 Query: 74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529 K+ K L L+ L I Q++IFCN+ +V+ L++K+ ++ +H M Q R+ + ++FR+G R L+ TD++ RGID+Q V++VIN+D P N E Y+HR+GRSGRFG G+A+N + +D L IEQ T+I ++P ++ I Sbjct: 257 KEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 408 The following BLAST results are available for this feature:
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623598 ID=BQ623598; Name=BQ623598; organism=Citrus sinensis; type=EST; length=636bpback to top |