BQ623598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A3_ORYSJ (Eukaryotic initiation factor 4A-3 OS=Oryza sativa subsp. japonica GN=Os02g0146600 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 6.354e-28 Identity = 58/148 (39.19%), Postives = 91/148 (61.49%), Query Frame = 2 Query: 74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517 K+ K L L+ L I QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P E YLHR+GRSGRFG G+A+N +T +D L+ I++ I+++P ++ Sbjct: 263 KEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVTIEELPANV 410 HSP 2 Score: 26.1794 bits (56), Expect = 6.354e-28 Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 1 Query: 28 DELTLKGITQYYAFVEE 78 DELTL+GI Q+Y VE+ Sbjct: 247 DELTLEGIKQFYVNVEK 263
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RH34_ORYSJ (DEAD-box ATP-dependent RNA helicase 34 OS=Oryza sativa subsp. japonica GN=Os03g0566800 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.228e-28 Identity = 60/152 (39.47%), Postives = 95/152 (62.50%), Query Frame = 2 Query: 74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529 K+ K L L+ L I Q++IFCN+ +V+ L +++ ++ +H M Q R+ + +FR+GA R L+ TD++ RG+D+Q V++VIN+D P N E Y+HR+GRSGRFG G+A+N + ED L IEQ T+I ++P ++ I Sbjct: 253 KEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGEFRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKEDIRILRDIEQYYSTQIDEMPMNVADLI 404
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RH2_ORYSJ (DEAD-box ATP-dependent RNA helicase 2 OS=Oryza sativa subsp. japonica GN=Os01g0639100 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.228e-28 Identity = 60/152 (39.47%), Postives = 95/152 (62.50%), Query Frame = 2 Query: 74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529 K+ K L L+ L I Q++IFCN+ +V+ L +++ ++ +H M Q R+ + +FR+GA R L+ TD++ RG+D+Q V++VIN+D P N E Y+HR+GRSGRFG G+A+N + ED L IEQ T+I ++P ++ I Sbjct: 253 KEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGEFRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKEDIRILRDIEQYYSTQIDEMPMNVADLI 404
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A1_PANTR (Eukaryotic initiation factor 4A-I OS=Pan troglodytes GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 8.274e-28 Identity = 58/148 (39.19%), Postives = 91/148 (61.49%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529 K L L+ L I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR+GR GRFG G+ +N++T ED+ L IE T I+++P ++ I Sbjct: 259 KLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVTINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406 HSP 2 Score: 24.6386 bits (52), Expect = 8.274e-28 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 1 Query: 28 DELTLKGITQYYAFVEERQ 84 +ELTL+GI Q+Y VE + Sbjct: 239 EELTLEGIRQFYINVEREE 257
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A3_NICPL (Eukaryotic initiation factor 4A-3 OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.075e-27 Identity = 60/152 (39.47%), Postives = 93/152 (61.18%), Query Frame = 2 Query: 74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529 K+ K L L+ L I Q++IFCN+ +V+ L K+ E ++ +H M Q R+ + +FR G R L+ TD++ RG+D+Q V++VIN+D P N E Y+HR+GRSGRFG G+A+N + +D L IEQ T+I ++P ++ I Sbjct: 240 KEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTSKMRENNFTVSSMHGDMPQKERDAIMAEFRGGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 391
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RH56_ORYSJ (DEAD-box ATP-dependent RNA helicase 56 OS=Oryza sativa subsp. japonica GN=Os01g0549700 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 1.076e-27 Identity = 63/155 (40.65%), Postives = 93/155 (60.00%), Query Frame = 2 Query: 71 LKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLI-TYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 532 L + K+ LN L L NQ +IF SV+R L K + E + IH+ M Q+ R + +F+ G R LV TDL RGIDI+ VN+VIN+D P ++++YLHRVGR+GRFG GLA+ + + D L ++++ +IK++P ID + Y Sbjct: 275 LSEAEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTY 429 HSP 2 Score: 23.0978 bits (48), Expect = 1.076e-27 Identity = 13/31 (41.94%), Postives = 18/31 (58.06%), Query Frame = 1 Query: 1 QKPYVINLMDE--LTLKGITQYYAFVEERQK 87 Q P I + DE LTL G+ Q+Y + E +K Sbjct: 250 QDPMEIYVDDEAKLTLHGLVQHYIKLSEAEK 280
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RH15_ORYSJ (DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sativa subsp. japonica GN=Os01g0550000 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.076e-27 Identity = 63/155 (40.65%), Postives = 93/155 (60.00%), Query Frame = 2 Query: 71 LKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLI-TYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 532 L + K+ LN L L NQ +IF SV+R L K + E + IH+ M Q+ R + +F+ G R LV TDL RGIDI+ VN+VIN+D P ++++YLHRVGR+GRFG GLA+ + + D L ++++ +IK++P ID + Y Sbjct: 275 LSEAEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTY 429 HSP 2 Score: 23.0978 bits (48), Expect = 1.076e-27 Identity = 13/31 (41.94%), Postives = 18/31 (58.06%), Query Frame = 1 Query: 1 QKPYVINLMDE--LTLKGITQYYAFVEERQK 87 Q P I + DE LTL G+ Q+Y + E +K Sbjct: 250 QDPMEIYVDDEAKLTLHGLVQHYIKLSEAEK 280
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A1_ORYSJ (Eukaryotic initiation factor 4A-1 OS=Oryza sativa subsp. japonica GN=Os06g0701100 PE=2 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.077e-27 Identity = 58/148 (39.19%), Postives = 91/148 (61.49%), Query Frame = 2 Query: 74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517 K+ K L L+ L I QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P E YLHR+GRSGRFG G+A+N +T +D L+ I++ I+++P ++ Sbjct: 263 KEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVVIEELPANV 410 HSP 2 Score: 26.9498 bits (58), Expect = 1.077e-27 Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 1 Query: 28 DELTLKGITQYYAFVEERQ 84 DELTL+GI Q+Y VE+ + Sbjct: 247 DELTLEGIKQFYVNVEKEE 265
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A2_RAT (Eukaryotic initiation factor 4A-II OS=Rattus norvegicus GN=Eif4a2 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.077e-27 Identity = 58/148 (39.19%), Postives = 91/148 (61.49%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529 K L L+ L I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR+GR GRFG G+A+N +T ED+ L IE T ++++P ++ I Sbjct: 260 KLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407 HSP 2 Score: 24.6386 bits (52), Expect = 1.077e-27 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 1 Query: 28 DELTLKGITQYYAFVEERQ 84 +ELTL+GI Q+Y VE + Sbjct: 240 EELTLEGIKQFYINVEREE 258
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A2_PONAB (Eukaryotic initiation factor 4A-II OS=Pongo abelii GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.077e-27 Identity = 58/148 (39.19%), Postives = 91/148 (61.49%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529 K L L+ L I Q++IF N+ +V+ L +K+ ++ +H M Q R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P N E Y+HR+GR GRFG G+A+N +T ED+ L IE T ++++P ++ I Sbjct: 260 KLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407 HSP 2 Score: 24.6386 bits (52), Expect = 1.077e-27 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 1 Query: 28 DELTLKGITQYYAFVEERQ 84 +ELTL+GI Q+Y VE + Sbjct: 240 EELTLEGIKQFYINVEREE 258 The following BLAST results are available for this feature:
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623598 ID=BQ623598; Name=BQ623598; organism=Citrus sinensis; type=EST; length=636bpback to top |