BQ623598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A3_HUMAN (Eukaryotic initiation factor 4A-III OS=Homo sapiens GN=EIF4A3 PE=1 SV=4) HSP 1 Score: 122.094 bits (305), Expect = 2.394e-27 Identity = 57/148 (38.51%), Postives = 92/148 (62.16%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529 K L L+ L I Q++IFCN+ +V+ L +K+ E ++ +H M Q R + +FR+GA R L+ TD++ RG+D+ V+++IN+D P N E Y+HR+GRSGR+G G+A+N + +D L IEQ T+I ++P ++ I Sbjct: 264 KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 411
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A3_CHICK (Eukaryotic initiation factor 4A-III OS=Gallus gallus GN=EIF4A3 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.394e-27 Identity = 57/148 (38.51%), Postives = 92/148 (62.16%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529 K L L+ L I Q++IFCN+ +V+ L +K+ E ++ +H M Q R + +FR+GA R L+ TD++ RG+D+ V+++IN+D P N E Y+HR+GRSGR+G G+A+N + +D L IEQ T+I ++P ++ I Sbjct: 265 KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 412
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A3_BOVIN (Eukaryotic initiation factor 4A-III OS=Bos taurus GN=EIF4A3 PE=2 SV=3) HSP 1 Score: 122.094 bits (305), Expect = 2.394e-27 Identity = 57/148 (38.51%), Postives = 92/148 (62.16%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529 K L L+ L I Q++IFCN+ +V+ L +K+ E ++ +H M Q R + +FR+GA R L+ TD++ RG+D+ V+++IN+D P N E Y+HR+GRSGR+G G+A+N + +D L IEQ T+I ++P ++ I Sbjct: 264 KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 411
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: I4A3B_XENLA (Eukaryotic initiation factor 4A-III-B OS=Xenopus laevis GN=eif4a3-B PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.394e-27 Identity = 57/148 (38.51%), Postives = 92/148 (62.16%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529 K L L+ L I Q++IFCN+ +V+ L +K+ E ++ +H M Q R + +FR+GA R L+ TD++ RG+D+ V+++IN+D P N E Y+HR+GRSGR+G G+A+N + +D L IEQ T+I ++P ++ I Sbjct: 267 KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 414
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: FAL1_YEAST (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae GN=FAL1 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.394e-27 Identity = 58/145 (40.00%), Postives = 92/145 (63.45%), Query Frame = 2 Query: 74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIP 508 K+ K L ++ L I Q +IFCN+ +V+ L++++ + ++ +H M Q+ R++V +DFR G R L+ TD++ RGID+Q V++VIN+D P+ E Y+HR+GRSGRFG G+A+N IT D L IE+ +I +P Sbjct: 248 KEEWKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLREIEKFYSIKINPMP 392
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: FAL1_YEAS7 (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae (strain YJM789) GN=FAL1 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.394e-27 Identity = 58/145 (40.00%), Postives = 92/145 (63.45%), Query Frame = 2 Query: 74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIP 508 K+ K L ++ L I Q +IFCN+ +V+ L++++ + ++ +H M Q+ R++V +DFR G R L+ TD++ RGID+Q V++VIN+D P+ E Y+HR+GRSGRFG G+A+N IT D L IE+ +I +P Sbjct: 248 KEEWKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLREIEKFYSIKINPMP 392
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A3_ARATH (Eukaryotic initiation factor 4A-3 OS=Arabidopsis thaliana GN=TIF4A-3 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 4.026e-27 Identity = 58/148 (39.19%), Postives = 90/148 (60.81%), Query Frame = 2 Query: 74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517 K+ K L L+ L I QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V++VINFD P E YLHR+GRSGRFG G+A+N +T ED + I++ ++++P ++ Sbjct: 263 KEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERMMADIQRFYNVVVEELPSNV 410 HSP 2 Score: 25.7942 bits (55), Expect = 4.026e-27 Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 1 Query: 28 DELTLKGITQYYAFVEERQ 84 DELTL+GI Q+Y V++ + Sbjct: 247 DELTLEGIKQFYVNVDKEE 265
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: I4A3A_XENLA (Eukaryotic initiation factor 4A-III-A OS=Xenopus laevis GN=eif4a3-A PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.083e-27 Identity = 57/148 (38.51%), Postives = 92/148 (62.16%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529 K L L+ L I Q++IFCN+ +V+ L +K+ E ++ +H M Q R + +FR+GA R L+ TD++ RG+D+ V+++IN+D P N E Y+HR+GRSGR+G G+A+N + +D L IEQ T+I ++P ++ I Sbjct: 268 KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGGKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 415
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A6_TOBAC (Eukaryotic initiation factor 4A-6 (Fragment) OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 5.289e-27 Identity = 57/148 (38.51%), Postives = 91/148 (61.49%), Query Frame = 2 Query: 74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517 K+ K L L+ L I QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P E YLHR+GRSGRFG G+++N +T +D L+ I++ I+++P ++ Sbjct: 103 KEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTKDDERMLFDIQKFYNVVIEELPANV 250 HSP 2 Score: 25.7942 bits (55), Expect = 5.289e-27 Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 1 Query: 28 DELTLKGITQYYAFVEERQ 84 DELTL+GI Q+Y V++ + Sbjct: 87 DELTLEGIKQFYVNVDKEE 105
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: SUB2_CRYNE (ATP-dependent RNA helicase SUB2 OS=Cryptococcus neoformans GN=SUB2 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 6.814e-27 Identity = 63/157 (40.13%), Postives = 91/157 (57.96%), Query Frame = 2 Query: 65 LLLKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYE-DRFNLYRIEQELGTEIKQIPPHIDQAIY 532 L L++ K+ LN L L+ NQ IF SV R L + E + IH+ + Q R F F+ R LV TD+F RGID++ VNVVIN+D P ++++YLHRVGR+GRFG GLA++ ++ + D+ L RI++ I +P +D A Y Sbjct: 283 LKLEEREKNRKLNDLLDNLEFNQVCIFVKSVQRATQLDALLQECNFPSICIHSGLQQAERISRFQQFKAFEKRILVATDIFGRGIDVERVNVVINYDAPSDADSYLHRVGRAGRFGTKGLAISFVSSDADQEVLQRIQERFTVAIPTLPETVDPATY 439 HSP 2 Score: 27.7202 bits (60), Expect = 6.814e-27 Identity = 15/31 (48.39%), Postives = 20/31 (64.52%), Query Frame = 1 Query: 1 QKPYVINLMDE--LTLKGITQYYAFVEERQK 87 Q P I + DE LTL G+ Q+Y +EER+K Sbjct: 260 QSPLEIYVDDETKLTLHGLQQFYLKLEEREK 290 The following BLAST results are available for this feature:
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623598 ID=BQ623598; Name=BQ623598; organism=Citrus sinensis; type=EST; length=636bpback to top |