BQ623598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A_MAIZE (Eukaryotic initiation factor 4A OS=Zea mays PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 8.881e-27 Identity = 55/148 (37.16%), Postives = 91/148 (61.49%), Query Frame = 2 Query: 74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517 K+ K L L+ L I QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P E YLHR+GRSGRFG G+A+N +T +D ++ +++ ++++P ++ Sbjct: 259 KEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERIVFDVQRFYNVTVEELPANV 406 HSP 2 Score: 24.6386 bits (52), Expect = 8.881e-27 Identity = 9/17 (52.94%), Postives = 14/17 (82.35%), Query Frame = 1 Query: 28 DELTLKGITQYYAFVEE 78 DELTL+GI Q+Y +++ Sbjct: 243 DELTLEGIKQFYVNIDK 259
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A9_TOBAC (Eukaryotic initiation factor 4A-9 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.156e-26 Identity = 57/148 (38.51%), Postives = 90/148 (60.81%), Query Frame = 2 Query: 74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517 K+ K L L+ L I QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P E YLHR+GRSGRFG G+++N +T +D L I++ I+++P ++ Sbjct: 262 KEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTSDDERMLSDIQRFYNVVIEELPANV 409 HSP 2 Score: 25.7942 bits (55), Expect = 1.156e-26 Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 1 Query: 28 DELTLKGITQYYAFVEERQ 84 DELTL+GI Q+Y V++ + Sbjct: 246 DELTLEGIKQFYVNVDKEE 264
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF411_TOBAC (Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.958e-26 Identity = 56/148 (37.84%), Postives = 90/148 (60.81%), Query Frame = 2 Query: 74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517 K+ K L L+ L I QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P E YLHR+G SGRFG G+++N +T +D L+ I++ I+++P ++ Sbjct: 262 KEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGHSGRFGRKGVSINFVTKDDERMLFDIQKFYNVVIEELPANV 409 HSP 2 Score: 25.7942 bits (55), Expect = 1.958e-26 Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 1 Query: 28 DELTLKGITQYYAFVEERQ 84 DELTL+GI Q+Y V++ + Sbjct: 246 DELTLEGIKQFYVNVDKEE 264
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: UAP56_CAEEL (Spliceosome RNA helicase BAT1 homolog OS=Caenorhabditis elegans GN=hel-1 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.317e-26 Identity = 61/155 (39.35%), Postives = 91/155 (58.71%), Query Frame = 2 Query: 71 LKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYE-DRFNLYRIEQELGTEIKQIPPHIDQAIY 532 LK+ K+ L L L+ NQ +IF +V R E L + +TE + IH +M Q+ R + F++ R LV TDLF RG+DI+ VN+V N+D P++S++YLHRV R+GRFG GLA+ ++ E D L ++ I ++P ID + Y Sbjct: 265 LKEAEKNRRLLNLLDALEFNQVVIFVKAVKRCEALHQLLTEQNFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVSDENDAKTLNSVQDRFDISITELPEKIDVSTY 419 HSP 2 Score: 23.0978 bits (48), Expect = 4.317e-26 Identity = 12/31 (38.71%), Postives = 19/31 (61.29%), Query Frame = 1 Query: 1 QKPYVINLMDE--LTLKGITQYYAFVEERQK 87 Q P + + DE LTL G+ Q+Y ++E +K Sbjct: 240 QDPMEVYVDDEAKLTLHGLQQHYVKLKEAEK 270
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A_DICDI (Eukaryotic initiation factor 4A OS=Dictyostelium discoideum GN=tifA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.896e-26 Identity = 56/145 (38.62%), Postives = 89/145 (61.38%), Query Frame = 2 Query: 74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIP 508 K+ K L ++ L I Q++IFCN+ +V+ L +++ + ++ +H M+Q R + FR+G R L+ TD+ RGID+Q V++VIN+D P + E Y+HR+GRSGRFG G+A+N + D L IEQ T+I ++P Sbjct: 254 KEDWKFGTLCDIYDSLTITQAVIFCNTKKKVDQLTEQMRDANFTVASMHGDMVQKEREEIIKSFRSGENRVLITTDILARGIDVQQVSLVINYDLPIDRENYIHRIGRSGRFGRKGVAINFVKNSDIRILRDIEQFYSTQIDEMP 398
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF414_TOBAC (Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.896e-26 Identity = 58/148 (39.19%), Postives = 91/148 (61.49%), Query Frame = 2 Query: 74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517 K+ K L L+ L I QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P E YLHR+GRSGRFG G+A+N +T +D L+ I++ I+++P ++ Sbjct: 262 KEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVIEELPANV 409
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: UAP56_DROME (ATP-dependent RNA helicase WM6 OS=Drosophila melanogaster GN=Hel25E PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.313e-26 Identity = 61/155 (39.35%), Postives = 90/155 (58.06%), Query Frame = 2 Query: 71 LKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYE-DRFNLYRIEQELGTEIKQIPPHIDQAIY 532 LK+ K+ L L L+ NQ +IF SV R L++ +TE + IH M Q+ R + F++ R LV T+LF RG+DI+ VN+V N+D P++S+TYLHRV R+GRFG GLA+ ++ E D L ++ I ++P ID + Y Sbjct: 266 LKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVALSQLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNEVQDRFDVNISELPEEIDLSTY 420 HSP 2 Score: 23.483 bits (49), Expect = 7.313e-26 Identity = 12/31 (38.71%), Postives = 19/31 (61.29%), Query Frame = 1 Query: 1 QKPYVINLMDE--LTLKGITQYYAFVEERQK 87 Q P + + DE LTL G+ Q+Y ++E +K Sbjct: 241 QDPMEVYVDDEAKLTLHGLQQHYVNLKENEK 271
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF410_TOBAC (Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.241e-25 Identity = 58/148 (39.19%), Postives = 90/148 (60.81%), Query Frame = 2 Query: 74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517 K+ K L L+ L I QS+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL RGID+Q V++VIN+D P E YLHR+GRSGRFG G+A+N +T +D L I++ I+++P ++ Sbjct: 262 KEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLSDIQKFYNVVIEELPANV 409
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: SUB2_SCLS1 (ATP-dependent RNA helicase sub2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=sub2 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.017e-25 Identity = 59/158 (37.34%), Postives = 93/158 (58.86%), Query Frame = 2 Query: 71 LKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYE-DRFNLYRIEQELGTEIKQIPP-HIDQAIYCR 538 L++ K+ LN L +L NQ IIF S R L K + E + IH+ + Q+ R + F+DF++ R V TD+F RGID+ +N+ IN+D P ++++YLHRVGR+GRFG GLA++ ++ E D+ L +E+ + + P +D A Y + Sbjct: 285 LEEREKNRRLNELLDELSFNQVIIFVKSTVRATELDKLLRECNFPSVAIHSGVSQEERIKRFNDFKDFNKRICVATDVFGRGIDVNKINLAINYDLPPDADSYLHRVGRAGRFGTKGLAISFVSNEADQEVLKAVEKRFEVALPEYPEGGVDSAAYTK 442 HSP 2 Score: 27.335 bits (59), Expect = 6.017e-25 Identity = 15/31 (48.39%), Postives = 20/31 (64.52%), Query Frame = 1 Query: 1 QKPYVINLMDE--LTLKGITQYYAFVEERQK 87 Q P I + +E LTL G+ QYY +EER+K Sbjct: 260 QNPLEIYIDNETKLTLYGLQQYYIKLEEREK 290
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: SUB2_SCHPO (ATP-dependent RNA helicase uap56 OS=Schizosaccharomyces pombe GN=uap56 PE=1 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 7.833e-25 Identity = 59/155 (38.06%), Postives = 90/155 (58.06%), Query Frame = 2 Query: 71 LKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNL-ITYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 532 L++ K+ +N L L+ NQ +IF SV+R L + + E + IH + Q+ R + + F++ R V TD+F RGIDI+ VN+VIN+D P + ++YLHRVGR+GRFG GLA+ + ED L +I++ I ++P ID Y Sbjct: 277 LEEKAKNRKINDLLDSLEFNQVVIFVKSVSRANELDRLLRECNFPSICIHGGLPQEERIKRYKAFKDFDKRICVATDVFGRGIDIERVNIVINYDMPDSPDSYLHRVGRAGRFGTKGLAITFSSSEEDSQILDKIQERFEVNITELPDEIDVGSY 431 HSP 2 Score: 25.409 bits (54), Expect = 7.833e-25 Identity = 14/31 (45.16%), Postives = 19/31 (61.29%), Query Frame = 1 Query: 1 QKPYVINLMDE--LTLKGITQYYAFVEERQK 87 Q P I + DE LTL G+ Q+Y +EE+ K Sbjct: 252 QNPLEIYVDDETKLTLHGLQQHYVKLEEKAK 282 The following BLAST results are available for this feature:
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623598 ID=BQ623598; Name=BQ623598; organism=Citrus sinensis; type=EST; length=636bpback to top |