BQ623598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RRP3_SCHPO (ATP-dependent rRNA helicase rrp3 OS=Schizosaccharomyces pombe GN=rrp3 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.564e-21 Identity = 54/139 (38.85%), Postives = 83/139 (59.71%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQ 502 K T L L ++L N IIF +VN + LA + LG+S +H ++ Q +R + F++GA LV TD+ RG+DI V+VVIN+D P +S+ Y+HRVGR+ R G G ++ L+T D RIE +G ++++ Sbjct: 272 KDTYLVYLVNELAGNSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGARSTLVATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVGRTARAGRAGKSIALVTQYDLEPFLRIEATIGKKMQE 410
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX25_BOVIN (ATP-dependent RNA helicase DDX25 OS=Bos taurus GN=DDX25 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.560e-21 Identity = 51/148 (34.46%), Postives = 82/148 (55.41%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNS------ETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPP 511 K L ++ + I Q+IIFC + + L ++ + G+ + ++ D R + FR+G + L+ T++ RGID++ V +V+NFD P N ETYLHR+GR+GRFG GLA N+I + L +I+ + IKQ+ P Sbjct: 325 KYQALCNIYGGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSSIKQLDP 472 HSP 2 Score: 23.483 bits (49), Expect = 3.560e-21 Identity = 13/27 (48.15%), Postives = 15/27 (55.56%), Query Frame = 1 Query: 7 PYVINLM-DELTLKGITQYYAFVEERQ 84 P VI L +ELTL I QYY R+ Sbjct: 297 PNVIKLRKEELTLNNIRQYYVLCGNRK 323
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX25_HUMAN (ATP-dependent RNA helicase DDX25 OS=Homo sapiens GN=DDX25 PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.560e-21 Identity = 48/146 (32.88%), Postives = 83/146 (56.85%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFP------KNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQI 505 K L ++ + I Q+IIFC + + L ++ + G+ + ++ + R + FR+G + L+ T++ RGID++ V +V+NFD P + ETYLHR+GR+GRFG GLA N+I ++ +L +I+ + IKQ+ Sbjct: 325 KYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKIQDHFNSSIKQL 470 HSP 2 Score: 26.1794 bits (56), Expect = 3.560e-21 Identity = 14/27 (51.85%), Postives = 16/27 (59.26%), Query Frame = 1 Query: 7 PYVINLM-DELTLKGITQYYAFVEERQ 84 P VI L +ELTL I QYY E R+ Sbjct: 297 PNVIKLRKEELTLNNIRQYYVLCEHRK 323
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX20_DANRE (Probable ATP-dependent RNA helicase DDX20 OS=Danio rerio GN=ddx20 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.373e-21 Identity = 56/149 (37.58%), Postives = 82/149 (55.03%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITY-EDRFNLYRIEQELGTEIKQIPPHIDQAI 529 K L LFSK+ NQ+++F N R + LA ++ G I + QD R + CR L+ TDL +RGID + VN+VIN D P++ ETY+HR+GR+GRFG LG+AV + E+ + I Q+ ++ +P I I Sbjct: 263 KVQSLLELFSKIPFNQALVFSNLHTRAQHLADILSSKGLPAVCISGGLSQDQRLEAMWKLKQYQCRVLISTDLTSRGIDAEKVNLVINLDVPQDWETYMHRIGRAGRFGTLGVAVTYCCHGEEENKMMAIAQKCSLDLMHLPDPIPPGI 411
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DD19B_HUMAN (ATP-dependent RNA helicase DDX19B OS=Homo sapiens GN=DDX19B PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.742e-21 Identity = 55/155 (35.48%), Postives = 91/155 (58.71%), Query Frame = 2 Query: 62 MLLLKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFP------KNSETYLHRVGRSGRFGHLGLAVNLITYEDRFN-LYRIEQELGTEIKQI 505 +L + K L L+ + I Q++IFC++ LA ++++ G+ + +M+ + R V FR G + LV T++ RGID++ V+VVINFD P ++ETYLHR+GR+GRFG GLAVN++ + N L RI++ +I+++ Sbjct: 312 VLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 466
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DD19A_HUMAN (ATP-dependent RNA helicase DDX19A OS=Homo sapiens GN=DDX19A PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.742e-21 Identity = 55/155 (35.48%), Postives = 91/155 (58.71%), Query Frame = 2 Query: 62 MLLLKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFP------KNSETYLHRVGRSGRFGHLGLAVNLITYEDRFN-LYRIEQELGTEIKQI 505 +L + K L L+ + I Q++IFC++ LA ++++ G+ + +M+ + R V FR G + LV T++ RGID++ V+VVINFD P ++ETYLHR+GR+GRFG GLAVN++ + N L RI++ +I+++ Sbjct: 311 VLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 465
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A_ENCCU (ATP-dependent RNA helicase eIF4A OS=Encephalitozoon cuniculi GN=TIF1 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.662e-20 Identity = 56/153 (36.60%), Postives = 85/153 (55.56%), Query Frame = 2 Query: 74 KKGR------KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFP--KNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIP 508 +KGR K L +F K ++ QSI+F NS ++ + + C I A++ Q R R + FR G R L+ + L +RGIDIQ ++VV D P + TY+HR+GRSGR+G G+A+N++ + NL IE+ T IK++P Sbjct: 267 RKGREDYLLPKLVTLYDIFRKQRLGQSIVFINSKEDARIVYDWLIRHEWECELISAELTQAERERTLNRFRGGTGRCLISSGLLSRGIDIQNLSVVFCLDVPSFERKSTYIHRIGRSGRYGRKGIAINIVYEHELKNLKAIERFYNTTIKELP 419
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DD19A_MOUSE (ATP-dependent RNA helicase DDX19A OS=Mus musculus GN=Ddx19a PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.662e-20 Identity = 55/155 (35.48%), Postives = 91/155 (58.71%), Query Frame = 2 Query: 62 MLLLKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFP------KNSETYLHRVGRSGRFGHLGLAVNLITYEDRFN-LYRIEQELGTEIKQI 505 +L + K L L+ + I Q++IFC++ LA ++++ G+ + +M+ + R V FR G + LV T++ RGID++ V+VVINFD P ++ETYLHR+GR+GRFG GLAVN++ + N L RI++ +I+++ Sbjct: 311 VLCNNREEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 465
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DBP5_YARLI (ATP-dependent RNA helicase DBP5 OS=Yarrowia lipolytica GN=DBP5 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.662e-20 Identity = 53/148 (35.81%), Postives = 86/148 (58.11%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNS------ETYLHRVGRSGRFGHLGLAVNLITYEDRFN-LYRIEQELGTEIKQIP 508 K L L+S L I S+IF + L +++++ G+ +H+ + D R+R+ DFR G + L+ T++ RGIDI V++V+N+D P + ETYLHR+GR+GRFG G++++ + E F L I+Q LG + Q+P Sbjct: 323 KFKMLEELYSMLTIASSVIFVAQRSTANALYQRMSKNGHKVSLLHSDLSVDERDRLMDDFRFGRSKVLISTNVIARGIDIATVSMVVNYDLPTDKNGKPDPETYLHRIGRTGRFGRSGVSISFVHDEASFEVLDSIQQSLGMTLTQVP 470
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: SUB2_EMENI (ATP-dependent RNA helicase sub2 OS=Emericella nidulans GN=sub2 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.727e-20 Identity = 57/156 (36.54%), Postives = 85/156 (54.49%), Query Frame = 2 Query: 71 LKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLI-TYEDRFNLYRIEQELGTEIKQIPPH-IDQAIY 532 L + K+ LN L L+ NQ IIF S R L K + E + +H+ R + F +F C V TD+F RGIDI+ +N+ IN+D P ++++YLHRVGR+GRFG GL+++ + T ED L IE+ + + P +D + Y Sbjct: 302 LSEAEKNRKLNELLDSLEFNQVIIFVKSTIRANELDKLLRECNFPSIAVHSG-----RYKEFKEFNKRIC---VATDVFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSTPEDEQVLKDIEKRFEVALPEYPEEGVDSSTY 449 HSP 2 Score: 22.7126 bits (47), Expect = 1.727e-20 Identity = 9/19 (47.37%), Postives = 13/19 (68.42%), Query Frame = 1 Query: 31 ELTLKGITQYYAFVEERQK 87 +LTL G+ QYY + E +K Sbjct: 289 KLTLHGLQQYYIKLSEAEK 307 The following BLAST results are available for this feature:
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623598 ID=BQ623598; Name=BQ623598; organism=Citrus sinensis; type=EST; length=636bpback to top |