BQ623598

Overview
NameBQ623598
Unique NameBQ623598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length636
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10924 contig Csv1_Contig10924:235..869. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DHH1_NEOFI (ATP-dependent RNA helicase dhh1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dhh1 PE=3 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.212e-71
Identity = 128/166 (77.11%), Postives = 145/166 (87.35%), Query Frame = 2 
Query:   35 LLSRELPNTMLLLKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 532
            L  R +      +++ +K  CLNTLFSKLQINQSIIFCNS NRVELLAKKITELGYSCFY HA+MLQ HRNRVFHDFRNG CRNLVC+DL TRGIDIQAVNVVINFDFPKN+ETYLHR+GRSGRFGHLGLA+NLI ++DRFNLY+IEQELGTEI+ IP +ID+ +Y
Sbjct:  254 LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLINWDDRFNLYKIEQELGTEIQPIPQNIDKKLY 419
[Close]
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DHH1_ASPTN (ATP-dependent RNA helicase dhh1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=dhh1 PE=3 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.212e-71
Identity = 128/166 (77.11%), Postives = 145/166 (87.35%), Query Frame = 2 
Query:   35 LLSRELPNTMLLLKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 532
            L  R +      +++ +K  CLNTLFSKLQINQSIIFCNS NRVELLAKKITELGYSCFY HA+MLQ HRNRVFHDFRNG CRNLVC+DL TRGIDIQAVNVVINFDFPKN+ETYLHR+GRSGRFGHLGLA+NLI ++DRFNLY+IEQELGTEI+ IP +ID+ +Y
Sbjct:  254 LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLINWDDRFNLYKIEQELGTEIQPIPQNIDKKLY 419
[Close]
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DHH1_ASPOR (ATP-dependent RNA helicase dhh1 OS=Aspergillus oryzae GN=dhh1 PE=3 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.212e-71
Identity = 128/166 (77.11%), Postives = 145/166 (87.35%), Query Frame = 2 
Query:   35 LLSRELPNTMLLLKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 532
            L  R +      +++ +K  CLNTLFSKLQINQSIIFCNS NRVELLAKKITELGYSCFY HA+MLQ HRNRVFHDFRNG CRNLVC+DL TRGIDIQAVNVVINFDFPKN+ETYLHR+GRSGRFGHLGLA+NLI ++DRFNLY+IEQELGTEI+ IP +ID+ +Y
Sbjct:  254 LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLINWDDRFNLYKIEQELGTEIQPIPQNIDKKLY 419
[Close]
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DHH1_ASPFU (ATP-dependent RNA helicase dhh1 OS=Aspergillus fumigatus GN=dhh1 PE=3 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.212e-71
Identity = 128/166 (77.11%), Postives = 145/166 (87.35%), Query Frame = 2 
Query:   35 LLSRELPNTMLLLKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 532
            L  R +      +++ +K  CLNTLFSKLQINQSIIFCNS NRVELLAKKITELGYSCFY HA+MLQ HRNRVFHDFRNG CRNLVC+DL TRGIDIQAVNVVINFDFPKN+ETYLHR+GRSGRFGHLGLA+NLI ++DRFNLY+IEQELGTEI+ IP +ID+ +Y
Sbjct:  254 LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLINWDDRFNLYKIEQELGTEIQPIPQNIDKKLY 419
[Close]
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DHH1_COCIM (ATP-dependent RNA helicase DHH1 OS=Coccidioides immitis GN=DHH1 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.528e-71
Identity = 127/166 (76.51%), Postives = 145/166 (87.35%), Query Frame = 2 
Query:   35 LLSRELPNTMLLLKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 532
            L  R +      +++ +K  CLNTLFSKLQINQSIIFCNS NRVELLAKKITELGYSCFY HA+MLQ +RNRVFHDFRNG CRNLVC+DL TRGIDIQAVNVVINFDFPKN+ETYLHR+GRSGRFGHLGLA+NLI ++DR+NLY+IEQELGTEI+ IPP ID+ +Y
Sbjct:  254 LTLRGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQQNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLINWDDRYNLYKIEQELGTEIQPIPPSIDKKLY 419
[Close]
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DHH1_PHANO (ATP-dependent RNA helicase DHH1 OS=Phaeosphaeria nodorum GN=DHH1 PE=3 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 5.094e-70
Identity = 127/166 (76.51%), Postives = 144/166 (86.75%), Query Frame = 2 
Query:   35 LLSRELPNTMLLLKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 532
            L  R +      +++ +K  CLNTLF+KLQINQSIIFCNS NRVELLAKKITELGYSCFY HA+MLQ +RNRVFHDFRNG CRNLVC+DL TRGIDIQAVNVVINFDFPKN+ETYLHR+GRSGRFGHLGLA+NLI +EDRFNLYRIEQELGTEI+ IP  I++ +Y
Sbjct:  256 LTLRGITQYYAFVEEKQKVHCLNTLFNKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQHNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLINWEDRFNLYRIEQELGTEIQPIPQVIEKNLY 421
[Close]
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DHH1_MAGGR (ATP-dependent RNA helicase DHH1 OS=Magnaporthe grisea GN=DHH1 PE=3 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 4.312e-69
Identity = 125/166 (75.30%), Postives = 143/166 (86.14%), Query Frame = 2 
Query:   35 LLSRELPNTMLLLKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 532
            L  R +      +++ +K  CLNTLFSKLQINQSIIFCNS NRVELLAKKITELGYSCFY HAKM Q  RNRVFHDFRNG CRNLVC+DL TRGIDIQAVNVVINFDFPKN+ETYLHR+GRSGR+GHLGLA+NLI++EDRFNLY IE++LGTEI+ IP  ID+++Y
Sbjct:  243 LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMQQQARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLISWEDRFNLYNIERDLGTEIQPIPSTIDKSLY 408
[Close]
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DHH1_NEUCR (ATP-dependent RNA helicase dhh-1 OS=Neurospora crassa GN=dhh-1 PE=3 SV=2)

HSP 1 Score: 259.61 bits (662), Expect = 9.607e-69
Identity = 124/166 (74.70%), Postives = 142/166 (85.54%), Query Frame = 2 
Query:   35 LLSRELPNTMLLLKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 532
            L  R +      +++ +K  CLNTLFSKLQINQSIIFCNS NRVELLAKKITELGYSCFY HAKM Q  RNRVFHDFRNG CRNLVC+DL TRGIDIQAVNVVINFDFPKN+ETYLHR+GRSGR+GHLGLA+NLI ++DRFNLY IE++LGTEI+ IP  ID+++Y
Sbjct:  252 LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMAQQARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLINWDDRFNLYNIERDLGTEIQPIPQTIDKSLY 417
[Close]
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DHH1_GIBZE (ATP-dependent RNA helicase DHH1 OS=Gibberella zeae GN=DHH1 PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.255e-68
Identity = 124/166 (74.70%), Postives = 142/166 (85.54%), Query Frame = 2 
Query:   35 LLSRELPNTMLLLKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 532
            L  R +      +++ +K  CLNTLFSKLQINQSIIFCNS NRVELLAKKITELGYSCFY HAKM Q  RNRVFHDFRNG CRNLVC+DL TRGIDIQAVNVVINFDFPKN+ETYLHR+GRSGR+GHLGLA+NLI ++DRFNLY IE++LGTEI+ IP  ID+++Y
Sbjct:  249 LTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMQQHARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLINWDDRFNLYNIERDLGTEIQPIPASIDKSLY 414
[Close]
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DHH1_BOTFB (ATP-dependent RNA helicase dhh1 OS=Botryotinia fuckeliana (strain B05.10) GN=dhh1 PE=3 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 2.140e-68
Identity = 125/166 (75.30%), Postives = 141/166 (84.94%), Query Frame = 2 
Query:   35 LLSRELPNTMLLLKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 532
            L  R +      +++  K  CLNTLFSKLQINQSIIFCNS NRVELLAKKITELGYSCFY HA+M+Q +RNRVFHDFRNG CRNLVC+DL TRGIDIQAVNVVINFDFPKN+ETYLHR+GRSGRFGHLGLA+NLI++EDRFNLY IE+ELGTEI  IP  I + +Y
Sbjct:  254 LTLRGITQFYAFVEEKEKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMIQANRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLISWEDRFNLYNIERELGTEIAPIPQIIPKNLY 419
The following BLAST results are available for this feature:
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DHH1_NEOFI1.212e-7177.11ATP-dependent RNA helicase dhh1 OS=Neosartorya fis... [more]
DHH1_ASPTN1.212e-7177.11ATP-dependent RNA helicase dhh1 OS=Aspergillus ter... [more]
DHH1_ASPOR1.212e-7177.11ATP-dependent RNA helicase dhh1 OS=Aspergillus ory... [more]
DHH1_ASPFU1.212e-7177.11ATP-dependent RNA helicase dhh1 OS=Aspergillus fum... [more]
DHH1_COCIM3.528e-7176.51ATP-dependent RNA helicase DHH1 OS=Coccidioides im... [more]
DHH1_PHANO5.094e-7076.51ATP-dependent RNA helicase DHH1 OS=Phaeosphaeria n... [more]
DHH1_MAGGR4.312e-6975.30ATP-dependent RNA helicase DHH1 OS=Magnaporthe gri... [more]
DHH1_NEUCR9.607e-6974.70ATP-dependent RNA helicase dhh-1 OS=Neurospora cra... [more]
DHH1_GIBZE1.255e-6874.70ATP-dependent RNA helicase DHH1 OS=Gibberella zeae... [more]
DHH1_BOTFB2.140e-6875.30ATP-dependent RNA helicase dhh1 OS=Botryotinia fuc... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00689 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00689 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623598 ID=BQ623598; Name=BQ623598; organism=Citrus sinensis; type=EST; length=636bp
CAAAAACCATATGTTATTAATCTGATGGATGAGCTTACTCTCAAGGGAAT
TACCCAATACTATGCTTTTGTTGAAGAAAGGCAGAAAGTCCACTTGCCTC
AACACACTTTTCTCTAAGTTGCAAATTAATCAATCTATCATTTTCTGCAA
TTCGGTGAATCGGGTTGAACTCCTTGCCAAGAAAATTACAGAACTTGGGT
ACTCTTGTTTTTATATCCATGCAAAGATGCTGCAAGACCATCGCAACAGA
GTATTTCATGACTTCCGCAATGGTGCATGCAGGAATCTTGTTTGTACTGA
CCTATTTACGAGGGGTATAGACATTCAAGCAGTGAATGTTGTCATTAACT
TTGATTTTCCTAAGAACTCGGAGACATATCTGCACAGAGTTGGTCGATCT
GGAAGGTTTGGACACCTTGGATTAGCTGTGAATTTGATTACTTACGAGGA
CCGCTTCAACTTGTATAGGATTGAGCAAGAACTCGGGACTGAAATTAAGC
AGATACCTCCGCATATTGATCAGGCAATTTACTGCAGGTGATTTATGGCC
GGTATCTTGCTATATAGCCAATGGTGGTAGCAATGGATTCCTGAGGCTGT
TGATTCAAGGCACTTGGCTCTGCAGCTGAGGAAGCA
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