BQ623598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX3L_MOUSE (Putative ATP-dependent RNA helicase Pl10 OS=Mus musculus GN=D1Pas1 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.224e-16 Identity = 50/143 (34.97%), Postives = 74/143 (51.75%), Query Frame = 2 Query: 83 RKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPP 511 ++S L+ L + + + ++F + + L + GY+C IH Q R H FR+G LV T + RG+DI V VINFD P + E Y+HR+GR+GR G+LGLA + E N+ + +L E KQ P Sbjct: 426 KRSFLLDLLNATGKDSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-ERNINITKDLLDLLVEAKQEVP 567
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DBP2_SCLS1 (ATP-dependent RNA helicase dbp2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dbp2 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.224e-16 Identity = 42/126 (33.33%), Postives = 73/126 (57.94%), Query Frame = 2 Query: 128 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQI 505 N+ +IF + + + + + + G+ IH Q+ R+ V ++F+ G +V TD+ +RGID++ + V N+D+P NSE Y+HR+GR+GR G G A+ L T +++ + L TE KQ+ Sbjct: 397 NKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRIGRTGRAGQKGTAITLFTTDNQKQARDLVNVL-TEAKQV 521
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DBP2_BOTFB (ATP-dependent RNA helicase dbp2 OS=Botryotinia fuckeliana (strain B05.10) GN=dbp2 PE=3 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 7.224e-16 Identity = 42/126 (33.33%), Postives = 73/126 (57.94%), Query Frame = 2 Query: 128 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQI 505 N+ +IF + + + + + + G+ IH Q+ R+ V ++F+ G +V TD+ +RGID++ + V N+D+P NSE Y+HR+GR+GR G G A+ L T +++ + L TE KQ+ Sbjct: 350 NKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRIGRTGRAGQKGTAITLFTTDNQKQARDLVNVL-TEAKQV 474
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: ROK1_LODEL (ATP-dependent RNA helicase ROK1 OS=Lodderomyces elongisporus GN=ROK1 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.435e-16 Identity = 41/105 (39.05%), Postives = 62/105 (59.05%), Query Frame = 2 Query: 137 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYED 451 IIF S+ R + L ++ + IHA+ R+ V F+NG L+ TD+ RG+D + VN+VIN+D P++++ Y+HR+GR+GR G G AV T ED Sbjct: 370 IIFLQSITRAKALFHELVYDKLNVDVIHAERTPKQRDEVIKRFKNGDIWVLITTDVLARGVDFKGVNMVINYDVPQSAQAYVHRIGRTGRGGRSGKAVTFFTKED 474
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RHLB_PSEAE (ATP-dependent RNA helicase rhlB OS=Pseudomonas aeruginosa GN=rhlB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.435e-16 Identity = 48/143 (33.57%), Postives = 78/143 (54.55%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIK-QIPP 511 K L L ++ + ++F N + V + +++T+ G S + + Q R R FR G R LV TD+ RGI I ++ VINF P++ + Y+HR+GR+GR G G +++ +D F L IE+ LG +I ++PP Sbjct: 244 KYKLLYNLVAQNNWERVMVFANRKDEVRRIEERLTKDGISAAQMSGDVPQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGTSISFAGEDDAFALPPIEELLGRKITCEMPP 386
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RHLB_PSEAB (ATP-dependent RNA helicase rhlB OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=rhlB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.435e-16 Identity = 48/143 (33.57%), Postives = 78/143 (54.55%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIK-QIPP 511 K L L ++ + ++F N + V + +++T+ G S + + Q R R FR G R LV TD+ RGI I ++ VINF P++ + Y+HR+GR+GR G G +++ +D F L IE+ LG +I ++PP Sbjct: 244 KYKLLYNLVAQNNWERVMVFANRKDEVRRIEERLTKDGISAAQMSGDVPQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGTSISFAGEDDAFALPPIEELLGRKITCEMPP 386
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RHLB_PSEA8 (ATP-dependent RNA helicase rhlB OS=Pseudomonas aeruginosa (strain LESB58) GN=rhlB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.435e-16 Identity = 48/143 (33.57%), Postives = 78/143 (54.55%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIK-QIPP 511 K L L ++ + ++F N + V + +++T+ G S + + Q R R FR G R LV TD+ RGI I ++ VINF P++ + Y+HR+GR+GR G G +++ +D F L IE+ LG +I ++PP Sbjct: 244 KYKLLYNLVAQNNWERVMVFANRKDEVRRIEERLTKDGISAAQMSGDVPQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGTSISFAGEDDAFALPPIEELLGRKITCEMPP 386
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RH42_ARATH (DEAD-box ATP-dependent RNA helicase 42 OS=Arabidopsis thaliana GN=RH42 PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 9.435e-16 Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 2 Query: 137 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYED 451 ++F S + + L + + + Y C +H Q R DF+N C L+ T + RG+D++ + +V+NFD P + E Y+HRVGR+GR G G AV I+ +D Sbjct: 780 LVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDD 884
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RH36_ARATH (DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana GN=RH36 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.435e-16 Identity = 47/144 (32.64%), Postives = 83/144 (57.64%), Query Frame = 2 Query: 77 KGRKSTCLNTLFSKLQ---INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIK 499 K K L + S+++ I ++IF ++ + L+ + EL +H+ Q R F++G L+ TD+ +RG+DI V++VIN+D P++ Y+HRVGR+ R G GLAV++IT D +++IE+E+G +++ Sbjct: 283 KDAKELYLVHILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKME 426
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX46_DICDI (ATP-dependent RNA helicase ddx46 OS=Dictyostelium discoideum GN=helB1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.435e-16 Identity = 43/111 (38.74%), Postives = 65/111 (58.56%), Query Frame = 2 Query: 131 QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLIT-YEDRFN 460 Q +IF N + L ++++ Y C +H Q R+ DF+N L+ T L +RG+DI+ +N+V+NFD P + E Y+HRVGR+GR G+ G A IT E+RF+ Sbjct: 758 QILIFTNRQETTDNLYRQLSNSQYQCLSLHGSKDQTDRDETISDFKNKVKTILIATPLASRGLDIKDLNLVVNFDCPDHLEDYVHRVGRTGRAGNRGTAYTFITPDEERFS 868 The following BLAST results are available for this feature:
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623598 ID=BQ623598; Name=BQ623598; organism=Citrus sinensis; type=EST; length=636bpback to top |