BQ623598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RHLB_ENT38 (ATP-dependent RNA helicase rhlB OS=Enterobacter sp. (strain 638) GN=rhlB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.745e-15 Identity = 48/139 (34.53%), Postives = 72/139 (51.80%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQ 502 K L TL + +++IIF N+ +R E + + G+ + + Q R R+ DF G LV TD+ RG+ I AV V N+D P + E Y+HR+GR+GR G G +++L E NL IE +G + Q Sbjct: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILEDFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLTAIETYIGHSVPQ 381
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DBP5_GIBZE (ATP-dependent RNA helicase DBP5 OS=Gibberella zeae GN=DBP5 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.745e-15 Identity = 44/149 (29.53%), Postives = 84/149 (56.38%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFP--------KNSETYLHRVGRSGRFGHLGLAVNLITYEDRFN-LYRIEQELGTEIKQI 505 K L L+ + I QS+IF + + + +++ G+ +HA R+ + FR G + L+ T++ RGID+ +V++VIN+D P ++ETYLHR+GR+GRFG +G++++ + + F+ L +I + G ++ ++ Sbjct: 302 KYDILCKLYGLMTIGQSVIFVKTRDSASEIERRMVADGHKVSALHAAFDGAERDNLLTKFRQGENKVLITTNVLARGIDVSSVSMVINYDIPMKGRGDTEPDAETYLHRIGRTGRFGRVGVSISFVYDKKSFDALSKIAEMYGIDLVKL 450
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DBP5_COCIM (ATP-dependent RNA helicase DBP5 OS=Coccidioides immitis GN=DBP5 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.745e-15 Identity = 43/152 (28.29%), Postives = 84/152 (55.26%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK-----------NSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYR-IEQELGTEIKQI 505 K L + L I SIIF + + +++ G++ + + R+ + FRNG + L+ T++ RGID+ V++VIN+D P+ +++TYLHR+GR+GRFG +G+AV+ ++ ++ + + + I++ T I+++ Sbjct: 321 KYEILVKFYGLLTIGSSIIFVKTRASAAEIERRMVAEGHTVVSLTGGIEGQKRDEIIDRFRNGTAKVLITTNVLARGIDVSTVSMVINYDIPELHLPGAARRMADAQTYLHRIGRTGRFGRVGVAVSFVSNQEEWQMLQDIQKYFSTNIERV 472
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DBP2_ASPOR (ATP-dependent RNA helicase dbp2 OS=Aspergillus oryzae GN=dbp2 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.745e-15 Identity = 40/134 (29.85%), Postives = 73/134 (54.48%), Query Frame = 2 Query: 128 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529 N+ +IF + + + + + + G+ IH Q R+ V ++F+ G +V TD+ +RGID++ + V+N+D+P NSE Y+HR+GR+GR G G A+ T ++ + L +QI P + + + Sbjct: 378 NKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNSKQARDLVTILTEAKQQIDPRLAEMV 511
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DBP2_ASPNC (ATP-dependent RNA helicase dbp2 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dbp2 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.745e-15 Identity = 40/134 (29.85%), Postives = 73/134 (54.48%), Query Frame = 2 Query: 128 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529 N+ +IF + + + + + + G+ IH Q R+ V ++F+ G +V TD+ +RGID++ + V+N+D+P NSE Y+HR+GR+GR G G A+ T ++ + L +QI P + + + Sbjct: 385 NKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNSKQARDLVTILTEAKQQIDPRLAEMV 518
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DB10_NICSY (ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.745e-15 Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = 2 Query: 107 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYED 451 L SK ++ IIFC++ + L++ +T + IH Q R+ V FR G LV TD+ RG+DI+ + VVIN+DFP E Y+HR+GR+GR G GLA + +D Sbjct: 384 LRSKEPGSKIIIFCSTKKMCDQLSRNLTR-NFGAAAIHGDKSQGERDYVLSQFRAGRSPVLVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGASGLAYTFFSDQD 497
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RRP3_MAGGR (ATP-dependent rRNA helicase RRP3 OS=Magnaporthe grisea GN=RRP3 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.585e-15 Identity = 46/138 (33.33%), Postives = 75/138 (54.35%), Query Frame = 2 Query: 65 LLLKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQ 478 L + K L L ++ +I+F +VN + ++ + L + +H ++ Q R + F+ + LV TD+ RG+DI V++VINFD P++S TY+HRVGR+ R G G A+++IT D RIE+ Sbjct: 330 LFIPHKHKDVYLIYLANEFAGKTTIVFTRTVNEAQRVSILLRTLSFGAIPLHGQLSQSMRLGALNKFKARSRDILVATDVAARGLDIPEVDLVINFDMPQDSMTYIHRVGRTARAGRSGRAISIITQYDLELWLRIEK 467
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RH5_ARATH (DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana GN=RH5 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.585e-15 Identity = 42/111 (37.84%), Postives = 60/111 (54.05%), Query Frame = 2 Query: 110 FSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLIT 442 + K Q N+ ++F E L + + + G+ IH Q R R F+ G+C LV TD+ RG+DI V VVIN+ FP +E Y+HR+GR+GR G G+A T Sbjct: 361 YHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFT 471
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RH39_ORYSJ (DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica GN=Os01g0184500 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.585e-15 Identity = 47/121 (38.84%), Postives = 67/121 (55.37%), Query Frame = 2 Query: 128 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRN--GACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQEL 484 N+ ++FCN++N + +TE S H ++ + R + FRN G C LVCTDL RG+D+ V+ VI FDFP NS YLHR GR+ R G G +L+ +D RIE+ + Sbjct: 369 NKVMVFCNTLNSSRAVDHFLTENQISTVNYHGEVPAEERVENLNKFRNEEGDCPTLVCTDLAARGLDLD-VDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVAKKDVTLATRIEEAM 488
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DRS1_USTMA (ATP-dependent RNA helicase DRS1 OS=Ustilago maydis GN=DRS1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.585e-15 Identity = 51/131 (38.93%), Postives = 68/131 (51.91%), Query Frame = 2 Query: 80 GRKS------TCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDR 454 GRKS L +L ++ +Q++IF S L LG S +H + Q+ R DFR+G L+ TDL +RG+DI+ V VIN+D P E YLHRVGR+ R G G AV L+ DR Sbjct: 590 GRKSEDAQRPALLLSLCTRTFTSQTMIFVRSKKLAHQLKIVFGLLGLSAGELHGDLSQEQRIDALTDFRDGKTDFLLATDLASRGLDIKGVQTVINYDMPGQFEAYLHRVGRTARAGRNGRAVTLVGEADR 720 The following BLAST results are available for this feature:
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623598 ID=BQ623598; Name=BQ623598; organism=Citrus sinensis; type=EST; length=636bpback to top |