BQ623598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DBP5_ASPCL (ATP-dependent RNA helicase dbp5 OS=Aspergillus clavatus GN=dbp5 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.585e-15 Identity = 43/152 (28.29%), Postives = 85/152 (55.92%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK-----------NSETYLHRVGRSGRFGHLGLAVNLITYEDRFN-LYRIEQELGTEIKQI 505 K L L+ L + SIIF + + K++ G++ + + R+ + FR+G + L+ T++ RGID+ V++VIN+D P+ + +TYLHR+GR+GRFG +G++++ ++ + ++ L +I++ TEI+++ Sbjct: 308 KYKTLVQLYGLLTVGSSIIFVQTRTSASEIEKRMVAEGHTVASLTGGIDVTKRDEIIDKFRSGEAKVLITTNVLARGIDVSTVSMVINYDIPELHRPGVPERQADFQTYLHRIGRTGRFGRVGVSISFVSNREEWDMLNQIQRYFNTEIQRV 459
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: ROK1_DEBHA (ATP-dependent RNA helicase ROK1 OS=Debaryomyces hansenii GN=ROK1 PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 4.683e-15 Identity = 40/105 (38.10%), Postives = 62/105 (59.05%), Query Frame = 2 Query: 137 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYED 451 IIF S+ R + L ++ + IHA+ R+ V F++G L+ TD+ RG+D + VN+VIN+D P++++ Y+HR+GR+GR G G AV T ED Sbjct: 365 IIFLQSITRAKALFHELLYDRLNVDVIHAERTPKQRDEVIKRFKSGDIWVLITTDVIARGVDFKGVNLVINYDVPQSAQAYVHRIGRTGRGGKAGKAVTFFTKED 469
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: ROK1_CANGA (ATP-dependent RNA helicase ROK1 OS=Candida glabrata GN=ROK1 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.683e-15 Identity = 41/105 (39.05%), Postives = 60/105 (57.14%), Query Frame = 2 Query: 137 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYED 451 IIF S+ R + L ++ + IHA+ R ++ F+ G L+CTD+ RGID + VN+VIN+D P ++ Y+HR+GR+GR G G AV L T D Sbjct: 378 IIFLESIARAKALYHELMYDRINVDVIHAERTAIQREKIIERFKTGELWCLICTDVLARGIDFKGVNLVINYDVPTTAQAYVHRIGRTGRGGRSGKAVTLYTKLD 482
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RHLB_SODGM (ATP-dependent RNA helicase rhlB OS=Sodalis glossinidius (strain morsitans) GN=rhlB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.683e-15 Identity = 47/137 (34.31%), Postives = 71/137 (51.82%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEI 496 K L TL + ++ IIF N+ +R E + + G+ + + Q R R+ F GA LV TD+ RG+ I +V V N+D P + E Y+HR+GR+GR G G +++L E NL IE +G +I Sbjct: 243 KMRLLQTLIEEEWPDRCIIFANTKHRCEDIWGHLAADGHRVGLLTGDVSQKRRLRILEKFTQGALDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGESGCSISLACEEYALNLTAIESYIGHQI 379
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: PRP5_EMENI (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Emericella nidulans GN=prp5 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.683e-15 Identity = 40/133 (30.08%), Postives = 70/133 (52.63%), Query Frame = 2 Query: 131 QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529 +S+IF + + L +++ GY C IH Q R+ DF+ G L+ T + RG+D++ + +V+N+D P + E Y+HR GR+GR G+ G AV +T + R ++ +KQ + +A+ Sbjct: 795 RSLIFVDRQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQE----RYSVDIAKALKQSGQEVPEAV 923
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DRS1_SCHPO (ATP-dependent RNA helicase drs1 OS=Schizosaccharomyces pombe GN=drs1 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.683e-15 Identity = 45/116 (38.79%), Postives = 62/116 (53.45%), Query Frame = 2 Query: 107 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDR 454 L +L ++IIF S + L + IH + Q+ R R DFR+G C L+ TD+ +RGIDI+ + VVIN++ P E YLHRVGR+ R G G A+ L DR Sbjct: 498 LCKELFHRRTIIFFRSKAFAHKMRVIFGLLSLNATEIHGSLSQEQRVRALEDFRDGKCNYLLATDVASRGIDIKGIEVVINYEAPATHEVYLHRVGRTARAGRSGRAITLAGEGDR 613
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DEAD_BUCAP (Cold-shock DEAD box protein A homolog OS=Buchnera aphidicola subsp. Schizaphis graminum GN=deaD PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.683e-15 Identity = 42/142 (29.58%), Postives = 75/142 (52.82%), Query Frame = 2 Query: 80 GRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQI 505 GRK+ L + +IIF + N +++ + GY+ ++ M Q R + ++G L+ TD+ RG+D+ ++ VIN+D P +SE+Y+HR+GR+GR G G A+ + +R L IE+ + I ++ Sbjct: 229 GRKTDALIRFLEVEDFSATIIFVKTKNATLEVSEALERNGYNSAALNGDMNQALREQTLERLKSGRLDILIATDVAARGLDVDRISFVINYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTINQTIPEV 370
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX5_PONAB (Probable ATP-dependent RNA helicase DDX5 OS=Pongo abelii GN=DDX5 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.683e-15 Identity = 37/105 (35.24%), Postives = 62/105 (59.05%), Query Frame = 2 Query: 128 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLIT 442 N++I+F + R + L +K+ G+ IH Q R+ V ++F++G L+ TD+ +RG+D++ V VIN+D+P +SE Y+HR+GR+ R G A T Sbjct: 342 NKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFT 446
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX5_PANTR (Probable ATP-dependent RNA helicase DDX5 OS=Pan troglodytes GN=DDX5 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.683e-15 Identity = 37/105 (35.24%), Postives = 62/105 (59.05%), Query Frame = 2 Query: 128 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLIT 442 N++I+F + R + L +K+ G+ IH Q R+ V ++F++G L+ TD+ +RG+D++ V VIN+D+P +SE Y+HR+GR+ R G A T Sbjct: 342 NKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFT 446
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX5_MOUSE (Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus GN=Ddx5 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.683e-15 Identity = 37/105 (35.24%), Postives = 62/105 (59.05%), Query Frame = 2 Query: 128 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLIT 442 N++I+F + R + L +K+ G+ IH Q R+ V ++F++G L+ TD+ +RG+D++ V VIN+D+P +SE Y+HR+GR+ R G A T Sbjct: 342 NKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFT 446 The following BLAST results are available for this feature:
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623598 ID=BQ623598; Name=BQ623598; organism=Citrus sinensis; type=EST; length=636bpback to top |