BQ623598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX5_HUMAN (Probable ATP-dependent RNA helicase DDX5 OS=Homo sapiens GN=DDX5 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.683e-15 Identity = 37/105 (35.24%), Postives = 62/105 (59.05%), Query Frame = 2 Query: 128 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLIT 442 N++I+F + R + L +K+ G+ IH Q R+ V ++F++G L+ TD+ +RG+D++ V VIN+D+P +SE Y+HR+GR+ R G A T Sbjct: 342 NKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFT 446
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX52_DICDI (Probable ATP-dependent RNA helicase ddx52 OS=Dictyostelium discoideum GN=ddx52 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.683e-15 Identity = 42/105 (40.00%), Postives = 60/105 (57.14%), Query Frame = 2 Query: 137 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYED 451 +IF S R L +++ G + IH++ Q R+ + FR G L+CT+L RG+D + VN VINFDFP +Y+HR+GR+GR G G+A L T D Sbjct: 444 LIFTQSKERAHDLFQELIFDGINVDVIHSERTQFQRDTIVKKFRMGKIWVLICTELMARGMDFKGVNFVINFDFPHTLASYIHRIGRTGRAGRPGVAYTLYTDAD 548
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX17_MOUSE (Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus GN=Ddx17 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.683e-15 Identity = 38/105 (36.19%), Postives = 63/105 (60.00%), Query Frame = 2 Query: 128 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLIT 442 N++IIF + R + L +++ G+ IH Q R+ V ++FR+G L+ TD+ +RG+D++ V VIN+D+P +SE Y+HR+GR+ R + G A T Sbjct: 340 NKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFT 444
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX17_HUMAN (Probable ATP-dependent RNA helicase DDX17 OS=Homo sapiens GN=DDX17 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.683e-15 Identity = 38/105 (36.19%), Postives = 63/105 (60.00%), Query Frame = 2 Query: 128 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLIT 442 N++IIF + R + L +++ G+ IH Q R+ V ++FR+G L+ TD+ +RG+D++ V VIN+D+P +SE Y+HR+GR+ R + G A T Sbjct: 340 NKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFT 444
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DBP8_BOTFB (ATP-dependent RNA helicase dbp8 OS=Botryotinia fuckeliana (strain B05.10) GN=dbp8 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.683e-15 Identity = 43/121 (35.54%), Postives = 66/121 (54.55%), Query Frame = 2 Query: 137 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIK 499 +IFCN + L + L + +H+K+ Q R FR A R LV TD+ RG+DI V +VIN+D P++ + Y+HRVGR+ R G G AV+ + D + IE +G +++ Sbjct: 375 VIFCNRTATADYLTHLLRLLDHRVTALHSKLPQRQRIDNLGRFRASAARILVATDVAARGLDIPEVGLVINYDIPRDPDDYIHRVGRTARAGRKGEAVSFVGQRDVQLIQAIENRVGRQME 495
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DBP5_AJECN (ATP-dependent RNA helicase DBP5 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=DBP5 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.683e-15 Identity = 47/153 (30.72%), Postives = 86/153 (56.21%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNS-VNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK-----------NSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYR-IEQELGTEIKQI 505 K L + L I SIIF + + VE+ + + E G++ + + R+ + FR G + L+ T++ RGID+Q V++VIN+D P+ +++TYLHR+GR+GRFG +G+AV+ + ++ + + + I+ TEI+++ Sbjct: 318 KFDILVKFYGLLTIGSSIIFVKTRASAVEIERRMVAE-GHTVVSLTGGVEGQKRDEIIDKFRQGDAKVLITTNVLARGIDVQTVSMVINYDIPELHAPKATKRIADAQTYLHRIGRTGRFGRVGVAVSFVASKEEWQMLQDIKTYFNTEIQRV 469
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DBP2_COCIM (ATP-dependent RNA helicase DBP2 OS=Coccidioides immitis GN=DBP2 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.683e-15 Identity = 40/127 (31.50%), Postives = 71/127 (55.91%), Query Frame = 2 Query: 137 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517 +IF + + + + + + G+ IH Q+ R+ V ++F+ G +V TD+ +RGID++ + V+N+D+P NSE Y+HR+GR+GR G G A+ L T ++ + L +QI P + Sbjct: 376 LIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITLFTTDNAKQARDLVNILTESKQQIDPRL 502
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DBP2_ASPCL (ATP-dependent RNA helicase dbp2 OS=Aspergillus clavatus GN=dbp2 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.683e-15 Identity = 40/134 (29.85%), Postives = 73/134 (54.48%), Query Frame = 2 Query: 128 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529 N+ +IF + + + + + + G+ IH Q R+ V ++F+ G +V TD+ +RGID++ + V+N+D+P NSE Y+HR+GR+GR G G A+ T ++ + L +QI P + + + Sbjct: 373 NKILIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKAGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTDNSKQARDLVTILTEAKQQIDPRLAEMV 506
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: ROK1_SCHPO (ATP-dependent RNA helicase rok1 OS=Schizosaccharomyces pombe GN=rok1 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.116e-15 Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 2 Query: 137 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYED 451 +IF + R + L ++ IH ++ Q R FR G L+ TDL RGID V +VINFDFP++ +Y+HR+GR+GR G+ G AV T ED Sbjct: 292 VIFVQDIERAKALYTELLFDEIHVGVIHGELPQAKREEALAKFRKGEIWVLIATDLLARGIDFHGVKMVINFDFPQSVHSYIHRIGRTGRAGNTGQAVTFFTKED 396
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RH40_ORYSJ (DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa subsp. japonica GN=Os01g0549400 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 6.116e-15 Identity = 41/105 (39.05%), Postives = 59/105 (56.19%), Query Frame = 2 Query: 137 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYED 451 +IFC + + LA+ +T + IH Q R +V FR+G LV TD+ RG+DI+ + VVIN+DFP E Y+HR+GR+GR G G+A +D Sbjct: 399 LIFCTTKRMCDQLARTLTRQ-FGASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQD 502 The following BLAST results are available for this feature:
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623598 ID=BQ623598; Name=BQ623598; organism=Citrus sinensis; type=EST; length=636bpback to top |