BQ623598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RH30_ARATH (DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana GN=RH30 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 6.116e-15 Identity = 46/148 (31.08%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 98 LNTLFSKLQINQSI-IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYED-RF--NLYRIEQELGTEIKQIPPHIDQAI 529 L TL +L I IF + + + +++ G+ IH Q R+RV +F++G + TD+ RG+D++ + V+N+DFP E Y+HR+GR+GR G G+A T+++ +F L +I QE G + +PP + + Sbjct: 400 LLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAG---QVVPPTLSALV 544
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RH14_ARATH (DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana GN=RH14 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 6.116e-15 Identity = 42/127 (33.07%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 137 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517 IIFC++ + L + +T + IH Q R+ V + FR+G LV TD+ RG+D++ + V+N+DFP E Y+HR+GR+GR G G A +D + + + L +++PP I Sbjct: 407 IIFCSTKRMCDQLTRNLTRQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQI 532
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: PRP28_PHANO (Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Phaeosphaeria nodorum GN=PRP28 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.116e-15 Identity = 44/125 (35.20%), Postives = 68/125 (54.40%), Query Frame = 2 Query: 137 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQEL-GTEIKQIP 508 I+F N + +A+ I +G+S +H Q+ R R LV TDL RGIDI V++V+NF+ + E+Y HR+GR+GR G G+A+ ED LY ++Q L ++I ++P Sbjct: 599 IVFVNIKRNCDAIARDIKNMGFSSVTLHGSKTQEQREAALAQLREHRVDVLVATDLAGRGIDITDVSLVVNFNMATSIESYTHRIGRTGRAGKSGVAITFWGNEDADVLYDLKQMLTKSQISKVP 723
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DEAD_SHIFL (Cold-shock DEAD box protein A OS=Shigella flexneri GN=deaD PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 6.116e-15 Identity = 41/141 (29.08%), Postives = 76/141 (53.90%), Query Frame = 2 Query: 83 RKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQI 505 RK+ L + +IIF + N +A+ + GY+ ++ M Q R + ++G L+ TD+ RG+D++ +++V+N+D P +SE+Y+HR+GR+GR G G A+ + +R L IE+ + I ++ Sbjct: 231 RKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEV 371
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DEAD_KLEPN (Cold-shock DEAD box protein A OS=Klebsiella pneumoniae GN=deaD PE=3 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 6.116e-15 Identity = 41/141 (29.08%), Postives = 76/141 (53.90%), Query Frame = 2 Query: 83 RKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQI 505 RK+ L + +IIF + N +A+ + GY+ ++ M Q R + ++G L+ TD+ RG+D++ +++V+N+D P +SE+Y+HR+GR+GR G G A+ + +R L IE+ + I ++ Sbjct: 231 RKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQALERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEV 371
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DEAD_ECOLI (Cold-shock DEAD box protein A OS=Escherichia coli (strain K12) GN=deaD PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 6.116e-15 Identity = 41/141 (29.08%), Postives = 76/141 (53.90%), Query Frame = 2 Query: 83 RKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQI 505 RK+ L + +IIF + N +A+ + GY+ ++ M Q R + ++G L+ TD+ RG+D++ +++V+N+D P +SE+Y+HR+GR+GR G G A+ + +R L IE+ + I ++ Sbjct: 231 RKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEV 371
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DEAD_ECOL6 (Cold-shock DEAD box protein A OS=Escherichia coli O6 GN=deaD PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 6.116e-15 Identity = 41/141 (29.08%), Postives = 76/141 (53.90%), Query Frame = 2 Query: 83 RKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQI 505 RK+ L + +IIF + N +A+ + GY+ ++ M Q R + ++G L+ TD+ RG+D++ +++V+N+D P +SE+Y+HR+GR+GR G G A+ + +R L IE+ + I ++ Sbjct: 231 RKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEV 371
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DEAD_ECO57 (Cold-shock DEAD box protein A OS=Escherichia coli O157:H7 GN=deaD PE=3 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 6.116e-15 Identity = 41/141 (29.08%), Postives = 76/141 (53.90%), Query Frame = 2 Query: 83 RKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQI 505 RK+ L + +IIF + N +A+ + GY+ ++ M Q R + ++G L+ TD+ RG+D++ +++V+N+D P +SE+Y+HR+GR+GR G G A+ + +R L IE+ + I ++ Sbjct: 231 RKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEV 371
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX5_MACFA (Probable ATP-dependent RNA helicase DDX5 OS=Macaca fascicularis GN=DDX5 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.116e-15 Identity = 37/105 (35.24%), Postives = 61/105 (58.10%), Query Frame = 2 Query: 128 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLIT 442 N++I+F + R + L +K+ G+ IH Q R V ++F++G L+ TD+ +RG+D++ V VIN+D+P +SE Y+HR+GR+ R G A T Sbjct: 342 NKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERGWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFT 446
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DBP8_PHANO (ATP-dependent RNA helicase DBP8 OS=Phaeosphaeria nodorum GN=DBP8 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.116e-15 Identity = 47/133 (35.34%), Postives = 71/133 (53.38%), Query Frame = 2 Query: 107 LFSKLQINQS-IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQ 502 L + L + +S IIFCN LL + L + +H+ + Q R FR A R LV TD+ RG+DI V +V+NFD P++ + Y+HRVGR+ R G G +V I D + IE+ +G ++ + Sbjct: 324 LLTPLNLTKSVIIFCNRTKTATLLEYMLRMLDHRVTALHSGLKQQDRISNLARFRAQAARILVATDVAARGLDIPEVGLVVNFDVPRDPDDYIHRVGRTARAGRPGNSVTFIGQRDVELVLAIEERVGGKMSE 456 The following BLAST results are available for this feature:
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623598 ID=BQ623598; Name=BQ623598; organism=Citrus sinensis; type=EST; length=636bpback to top |