BQ623598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A2_ORYSJ (Putative eukaryotic initiation factor 4A-2 OS=Oryza sativa subsp. japonica GN=Os02g0221300 PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.362e-14 Identity = 46/137 (33.58%), Postives = 77/137 (56.20%), Query Frame = 2 Query: 107 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517 LF ++I +SIIF N+ + + L +KI GY+ IH + Q R++ +F++G+ R L+ TDL RGID+ I +D P YL V +SG+ G G+A++ IT D I++ T+I+++P ++ Sbjct: 279 LFDTMEITRSIIFVNTRHHAKSLTEKIRGKGYTVSAIHGGIHQRARDKAVQEFQSGSSRILITTDL--RGIDVLRAPAAIFYDLPTQPVCYLRHV-QSGQHGRKGVAISFITSTDERVFSTIQKFCNTQIEELPSNV 412
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DRS1_PICGU (ATP-dependent RNA helicase DRS1 OS=Pichia guilliermondii GN=DRS1 PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.362e-14 Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 2 Query: 122 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLI 439 Q N+ ++F + L + LG +H + Q+ R + DFR+ A L+CTDL RG+DI + +VINFD PK E YLHRVGR+ R G G ++ + Sbjct: 446 QQNRIVVFVSRKEMAHRLRIVLGLLGMKVSELHGSLTQEQRLQSVKDFRSLAVPVLICTDLAARGLDIPKIEIVINFDMPKTHEIYLHRVGRTARAGREGRSITFV 551
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX54_MOUSE (ATP-dependent RNA helicase DDX54 OS=Mus musculus GN=Ddx54 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.362e-14 Identity = 48/162 (29.63%), Postives = 82/162 (50.62%), Query Frame = 2 Query: 32 SLLSRELPNTMLLLKKGRKSTCLNTLFSKL--QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPP 511 S L+ +L + LL+++ K+ L L + +Q+++F + + E L + + G SC +I++ + Q R F + C L+ TDL RG+DI ++ VIN+ FP + +LHRVGR R G G A +L+ ++ L + LG + P Sbjct: 304 SKLNEQLKTSFLLVREDTKAAVLLYLLQNVVRPQDQTVVFVATKHHAEYLTELLMGQGVSCAHIYSALDQTARKINLAKFTHNKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRSVTLARP 465
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX4_MACFA (Probable ATP-dependent RNA helicase DDX4 OS=Macaca fascicularis GN=DDX4 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.362e-14 Identity = 46/156 (29.49%), Postives = 80/156 (51.28%), Query Frame = 2 Query: 44 RELPNTMLLLKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPP 511 R++ T+L + + K L + + ++++F + + + +A + + S IH Q R + DFR G C LV T + RG+DI+ V VINFD P + Y+HR+GR+GR G+ G A++ E +L + ++ T+ +Q P Sbjct: 514 RDVQQTVLQVGQFSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVP 669
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX4_HUMAN (Probable ATP-dependent RNA helicase DDX4 OS=Homo sapiens GN=DDX4 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.362e-14 Identity = 46/156 (29.49%), Postives = 80/156 (51.28%), Query Frame = 2 Query: 44 RELPNTMLLLKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPP 511 R++ T+L + + K L + + ++++F + + + +A + + S IH Q R + DFR G C LV T + RG+DI+ V VINFD P + Y+HR+GR+GR G+ G A++ E +L + ++ T+ +Q P Sbjct: 513 RDVQQTVLQVGQFSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVP 668
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX42_DICDI (Probable ATP-dependent RNA helicase ddx42 OS=Dictyostelium discoideum GN=ddx42 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.362e-14 Identity = 42/139 (30.22%), Postives = 74/139 (53.24%), Query Frame = 2 Query: 101 NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517 N L L +IF ++ VE L+ +T+ G+ +H Q R++ F+ G L+ TD+ RG+DI + V+N+D ++ E++ HR+GR+GR G+ G+A LIT +D + + L + + +PP + Sbjct: 542 NQLALLLSQGSVLIFVSTKVAVEQLSSNLTKFGFQTCTLHGDKNQIERSQTIQTFKEGKINILIATDVAARGLDIPLIKNVVNYDTSRDIESHTHRIGRTGRAGNTGVAYTLITPKDIHFSVDLIKNLESASQFVPPEL 680
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DBP5_ASPFU (ATP-dependent RNA helicase dbp5 OS=Aspergillus fumigatus GN=dbp5 PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.362e-14 Identity = 42/152 (27.63%), Postives = 83/152 (54.61%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK-----------NSETYLHRVGRSGRFGHLGLAVNLITYEDRFN-LYRIEQELGTEIKQI 505 K L L+ L + SIIF + + + +++T G++ + + R+ + FR G + L+ T++ RGID+ V++VIN+D P+ + +TYLHR+GR+GRFG +G++++ ++ + + L +I+ EI+++ Sbjct: 308 KYRTLVQLYGLLTVGSSIIFVQTRAAAQEIERRMTAEGHTVVSLTGERDPSVRDAIIDQFRRGEAKVLIATNVLARGIDVSTVSMVINYDIPELHQPNVPGRQADFQTYLHRIGRTGRFGRVGVSISFVSNREEWEMLNQIQTYFNCEIQRV 459
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DBP3_NEUCR (ATP-dependent RNA helicase dbp-3 OS=Neurospora crassa GN=dbp-3 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.362e-14 Identity = 40/106 (37.74%), Postives = 57/106 (53.77%), Query Frame = 2 Query: 137 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDR 454 ++FC + + ++ G IH + QD R R F++G LV TD+ RG+DI V +VIN FP E Y+HR+GR+GR G LG A+ L T D+ Sbjct: 454 LVFCLYKKEAVRVEQFLSRKGIKVASIHGDLRQDQRTRSLEAFKSGTTTVLVATDVAARGLDIPEVKLVINVTFPLTIEDYVHRIGRTGRAGKLGKAITLFTEHDK 559
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RHLB_SHIF8 (ATP-dependent RNA helicase rhlB OS=Shigella flexneri serotype 5b (strain 8401) GN=rhlB PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.779e-14 Identity = 47/137 (34.31%), Postives = 71/137 (51.82%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEI 496 K L TL + +++IIF N+ +R E + + G+ + + Q R R+ +F G LV TD+ RG+ I AV V N+D P + E Y+HR+GR+GR G G +++L E NL IE +G I Sbjct: 243 KMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIENYIGHSI 379
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RHLB_PSESM (ATP-dependent RNA helicase rhlB OS=Pseudomonas syringae pv. tomato GN=rhlB PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.779e-14 Identity = 43/133 (32.33%), Postives = 75/133 (56.39%), Query Frame = 2 Query: 137 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIK-QIPP-HIDQAI 529 ++F N + V + +++ G + + + Q R + FR G R LV TD+ RGI I ++ VINF P+ + Y+HR+GR+GR G G++++ +D + L IE++LG +I + PP H+ +A+ Sbjct: 260 MVFANRKDEVRRIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGADGVSISFAGEDDSYQLPAIEEKLGRKISCETPPTHLLRAV 392 The following BLAST results are available for this feature:
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623598 ID=BQ623598; Name=BQ623598; organism=Citrus sinensis; type=EST; length=636bpback to top |