BQ623598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RH53_ARATH (DEAD-box ATP-dependent RNA helicase 53 OS=Arabidopsis thaliana GN=RH53 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.779e-14 Identity = 38/124 (30.65%), Postives = 70/124 (56.45%), Query Frame = 2 Query: 137 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIP 508 I+F + + L+ + + C +H + Q R R FR+G LV TD+ RG+D+ V+++I+++ P N+ET++HR GR+GR G G A+ + + + + IE+E+G+ ++P Sbjct: 353 IVFTQTKRDADRLSYALAR-SFKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAVKIIEREVGSRFTELP 475
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RH52A_ORYSJ (DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp. japonica GN=Os06g0602400 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.779e-14 Identity = 47/133 (35.34%), Postives = 67/133 (50.38%), Query Frame = 2 Query: 113 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPP 511 SKLQ +++F + + L + G+ IH Q R F+ G +V TD+ +RG+D+ V VIN+D PK+ E Y+HR+GR+GR G G A T D +L + EL TE KQ P Sbjct: 347 SKLQQPLTLVFVETKREADSLRYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLDVPNVAHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTESDH-SLAKGLLELMTEAKQDVP 478
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RH36_ORYSJ (DEAD-box ATP-dependent RNA helicase 36 OS=Oryza sativa subsp. japonica GN=Os07g0633500 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.779e-14 Identity = 47/141 (33.33%), Postives = 77/141 (54.61%), Query Frame = 2 Query: 86 KSTCLNTLFSKLQ---INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYE-DRFNLYRIEQELGTEI 496 K L L SK+ I I+F ++ + L + ELG+ +H+ Q R H+F++ L+ TD+ +RG+DIQ V++VIN+D P+ Y+HRVGR+ R GL+++ IT + D L+ IE +G ++ Sbjct: 305 KELYLFYLLSKMNEDNIRSVIVFVSTCRTCQYLDFLLEELGHPAVSLHSHKPQSRRLAALHNFKSSKVPVLLATDVASRGLDIQTVDLVINYDVPRYPRDYIHRVGRTARATRGGLSISFITTQRDIRLLHEIEDVVGKQL 445
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: PRP5_ASPNC (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=prp5 PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.779e-14 Identity = 38/133 (28.57%), Postives = 70/133 (52.63%), Query Frame = 2 Query: 131 QSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529 +++IF + + L +++ GY C IH Q R+ DF+ G L+ T + RG+D++ + +V+N+D P + E Y+HR GR+GR G+ G AV +T + I + L +++P + + + Sbjct: 801 RALIFVDRQEAADALLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAKALKQSGQKVPEPVQKLV 933
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: PRP28_CRYNE (Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Cryptococcus neoformans GN=PRP28 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.779e-14 Identity = 44/126 (34.92%), Postives = 66/126 (52.38%), Query Frame = 2 Query: 137 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLY--RIEQELGTEIKQIP 508 I+F N +++ K + + G S +H+ Q+ R R+G LV TDL RGID+ V++VIN+ E Y+HR+GR+GR G G+A+ +T +D +Y RIE E K P Sbjct: 588 IVFVNQKKTADMVVKYVQQAGMSGVTLHSGKSQEQREAALQALRDGEISVLVATDLAGRGIDVPDVSLVINWQMSDTIEKYVHRIGRTGRAGKTGVAITFLTNDDDEVMYDLRIEVEKSKMSKMNP 713
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX42_PONAB (ATP-dependent RNA helicase DDX42 OS=Pongo abelii GN=DDX42 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.779e-14 Identity = 38/105 (36.19%), Postives = 61/105 (58.10%), Query Frame = 2 Query: 137 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYED 451 ++F E LA + + G++ +H M Q RN+V DF+ LV TD+ RG+DI ++ VIN+D ++ +T+ HR+GR+GR G G+A L+T +D Sbjct: 502 LLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKD 606
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX42_MOUSE (ATP-dependent RNA helicase DDX42 OS=Mus musculus GN=Ddx42 PE=1 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 1.779e-14 Identity = 38/105 (36.19%), Postives = 61/105 (58.10%), Query Frame = 2 Query: 137 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYED 451 ++F E LA + + G++ +H M Q RN+V DF+ LV TD+ RG+DI ++ VIN+D ++ +T+ HR+GR+GR G G+A L+T +D Sbjct: 502 LLFVTKKANAEELASNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKD 606
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX42_HUMAN (ATP-dependent RNA helicase DDX42 OS=Homo sapiens GN=DDX42 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.779e-14 Identity = 38/105 (36.19%), Postives = 61/105 (58.10%), Query Frame = 2 Query: 137 IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYED 451 ++F E LA + + G++ +H M Q RN+V DF+ LV TD+ RG+DI ++ VIN+D ++ +T+ HR+GR+GR G G+A L+T +D Sbjct: 502 LLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKD 606
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX17_TRYBB (Putative DEAD-box RNA helicase HEL64 OS=Trypanosoma brucei brucei GN=HEL64 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.779e-14 Identity = 42/137 (30.66%), Postives = 70/137 (51.09%), Query Frame = 2 Query: 41 SRELPNTMLLLKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYED 451 ++++ +L ++ K L L + + + ++FC + L +++ GY IH Q R + FR LV TD+ RG+DI+ + VIN+DFP + Y+HR+GR+GR G G V LIT ++ Sbjct: 317 NKDVTQRFILTQEFAKQDELRKLMQEHREERVLVFCKMKRTADELERQLRRWGYDAMAIHGDKEQRQREFILARFRKDPRLCLVATDVAARGLDIKQLETVINYDFPMQIDDYVHRIGRTGRAGGEGRCVYLITKKE 453
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DBP3_CHAGB (ATP-dependent RNA helicase DBP3 OS=Chaetomium globosum GN=DBP3 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.779e-14 Identity = 44/129 (34.11%), Postives = 64/129 (49.61%), Query Frame = 2 Query: 68 LLKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDR 454 LLK+ +K + N ++ ++FC + + + G IH + QD R R F+ G LV TD+ RG+DI V +VIN FP E Y+HR+GR+GR G G A+ L T D+ Sbjct: 441 LLKEAQKGSAKN--------DRILVFCLYKKEAVRVEQNLERRGIRVCSIHGDLRQDQRTRSLESFKAGTTSVLVATDVAARGLDIPEVKLVINVTFPLTIEDYVHRIGRTGRAGKKGKAITLFTEHDK 561 The following BLAST results are available for this feature:
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623598 ID=BQ623598; Name=BQ623598; organism=Citrus sinensis; type=EST; length=636bpback to top |