BQ623598

Overview
NameBQ623598
Unique NameBQ623598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length636
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: FAL1_CANAL (ATP-dependent RNA helicase FAL1 OS=Candida albicans GN=FAL1 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.493e-30
Identity = 62/145 (42.76%), Postives = 94/145 (64.83%), Query Frame = 2 
Query:   86 KSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHID 520
            K   L  L+  L I Q++IFCN+  +V  LA ++ +  ++   +H  M QD R+ + +DFR G  R L+ TD++ RGID+Q V++VIN+D P + E Y+HR+GRSGRFG  G A+NLIT +D   L   E+   T+IK++P +I+
Sbjct:  252 KFDTLCDLYDNLTITQAVIFCNTKLKVNWLADQMKKQNFTVVAMHGDMKQDERDSIMNDFRRGNSRVLISTDVWARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGTAINLITKDDVVTLKEFEKYYSTKIKEMPMNIN 396

HSP 2 Score: 22.7126 bits (47), Expect = 2.493e-30
Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = 1 
Query:   28 DELTLKGITQYYAFVE 75
            DE++L GI QYY   E
Sbjct:  232 DEISLSGIKQYYVQCE 247
[Close]
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: IF4A_SCLS1 (ATP-dependent RNA helicase eIF4A OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tif1 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.493e-30
Identity = 61/152 (40.13%), Postives = 96/152 (63.16%), Query Frame = 2 
Query:   74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 529
            K+  K   L+ L+  + I Q++IFCN+  +V+ L  K+T   ++   +H  M Q  R+ +  +FR+G+ R L+ TDL  RGID+Q V++VIN+D P N E Y+HR+GR GRFG  G+A+N +T ED   +  IEQ   T+I+++P ++   I
Sbjct:  247 KEDWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQGQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTAEDVRMMREIEQFYSTQIEEMPMNVADLI 398

HSP 2 Score: 23.8682 bits (50), Expect = 2.493e-30
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 1 
Query:   31 ELTLKGITQYYAFVEE 78
            ELTL+GI Q+Y  VE+
Sbjct:  232 ELTLEGIKQFYIAVEK 247
[Close]
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: FAL1_SCLS1 (ATP-dependent RNA helicase fal1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=fal1 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.493e-30
Identity = 62/148 (41.89%), Postives = 93/148 (62.84%), Query Frame = 2 
Query:   74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517
            K+  K   L  L+  L I Q++IFCN+  +V+ L  K+ E  ++   +H +M Q  R+ +  DFR G  R L+ TD++ RGID+Q V++VIN+D P N E Y+HR+GRSGRFG  G+A+N +T ED   L  IE    T+I ++P ++
Sbjct:  247 KEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPVNRENYIHRIGRSGRFGRKGVAINFVTSEDVRILRDIELYYSTQIDEMPMNV 394

HSP 2 Score: 26.1794 bits (56), Expect = 2.493e-30
Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 1 
Query:   28 DELTLKGITQYYAFVEERQ 84
            DELTL+G+ QY+  VE+ +
Sbjct:  231 DELTLEGLKQYFIAVEKEE 249
[Close]
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: FAL1_NEOFI (ATP-dependent RNA helicase fal1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=fal1 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.493e-30
Identity = 61/148 (41.22%), Postives = 93/148 (62.84%), Query Frame = 2 
Query:   74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517
            K+  K   L  L+  L I Q++IFCN+  +V+ L  K+ E  ++   +H +M Q  R+ +  DFR G  R L+ TD++ RGID+Q V++VIN+D P N E Y+HR+GRSGRFG  G+A+N +T +D   L  IE    T+I ++P ++
Sbjct:  247 KEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRILRDIELYYSTQIDEMPMNV 394

HSP 2 Score: 26.9498 bits (58), Expect = 2.493e-30
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 1 
Query:   28 DELTLKGITQYYAFVEERQ 84
            DELTL+GI QY+  VE+ +
Sbjct:  231 DELTLEGIKQYFIAVEKEE 249
[Close]
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: FAL1_EMENI (ATP-dependent RNA helicase fal1 OS=Emericella nidulans GN=fal1 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.493e-30
Identity = 61/148 (41.22%), Postives = 93/148 (62.84%), Query Frame = 2 
Query:   74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517
            K+  K   L  L+  L I Q++IFCN+  +V+ L  K+ E  ++   +H +M Q  R+ +  DFR G  R L+ TD++ RGID+Q V++VIN+D P N E Y+HR+GRSGRFG  G+A+N +T +D   L  IE    T+I ++P ++
Sbjct:  247 KEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRILRDIELYYSTQIDEMPMNV 394

HSP 2 Score: 26.9498 bits (58), Expect = 2.493e-30
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 1 
Query:   28 DELTLKGITQYYAFVEERQ 84
            DELTL+GI QY+  VE+ +
Sbjct:  231 DELTLEGIKQYFIAVEKEE 249
[Close]
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: FAL1_ASPTN (ATP-dependent RNA helicase fal1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=fal1 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.493e-30
Identity = 61/148 (41.22%), Postives = 93/148 (62.84%), Query Frame = 2 
Query:   74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517
            K+  K   L  L+  L I Q++IFCN+  +V+ L  K+ E  ++   +H +M Q  R+ +  DFR G  R L+ TD++ RGID+Q V++VIN+D P N E Y+HR+GRSGRFG  G+A+N +T +D   L  IE    T+I ++P ++
Sbjct:  247 KEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRILRDIELYYSTQIDEMPMNV 394

HSP 2 Score: 26.9498 bits (58), Expect = 2.493e-30
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 1 
Query:   28 DELTLKGITQYYAFVEERQ 84
            DELTL+GI QY+  VE+ +
Sbjct:  231 DELTLEGIKQYFIAVEKEE 249
[Close]
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: FAL1_ASPOR (ATP-dependent RNA helicase fal1 OS=Aspergillus oryzae GN=fal1 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.493e-30
Identity = 61/148 (41.22%), Postives = 93/148 (62.84%), Query Frame = 2 
Query:   74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517
            K+  K   L  L+  L I Q++IFCN+  +V+ L  K+ E  ++   +H +M Q  R+ +  DFR G  R L+ TD++ RGID+Q V++VIN+D P N E Y+HR+GRSGRFG  G+A+N +T +D   L  IE    T+I ++P ++
Sbjct:  246 KEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRILRDIELYYSTQIDEMPMNV 393

HSP 2 Score: 26.9498 bits (58), Expect = 2.493e-30
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 1 
Query:   28 DELTLKGITQYYAFVEERQ 84
            DELTL+GI QY+  VE+ +
Sbjct:  230 DELTLEGIKQYFIAVEKEE 248
[Close]
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: FAL1_ASPNC (ATP-dependent RNA helicase fal1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=fal1 PE=3 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 2.493e-30
Identity = 61/148 (41.22%), Postives = 93/148 (62.84%), Query Frame = 2 
Query:   74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517
            K+  K   L  L+  L I Q++IFCN+  +V+ L  K+ E  ++   +H +M Q  R+ +  DFR G  R L+ TD++ RGID+Q V++VIN+D P N E Y+HR+GRSGRFG  G+A+N +T +D   L  IE    T+I ++P ++
Sbjct:  247 KEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRILRDIELYYSTQIDEMPMNV 394

HSP 2 Score: 26.9498 bits (58), Expect = 2.493e-30
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 1 
Query:   28 DELTLKGITQYYAFVEERQ 84
            DELTL+GI QY+  VE+ +
Sbjct:  231 DELTLEGIKQYFIAVEKEE 249
[Close]
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: FAL1_ASPFU (ATP-dependent RNA helicase fal1 OS=Aspergillus fumigatus GN=fal1 PE=3 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 2.493e-30
Identity = 61/148 (41.22%), Postives = 93/148 (62.84%), Query Frame = 2 
Query:   74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517
            K+  K   L  L+  L I Q++IFCN+  +V+ L  K+ E  ++   +H +M Q  R+ +  DFR G  R L+ TD++ RGID+Q V++VIN+D P N E Y+HR+GRSGRFG  G+A+N +T +D   L  IE    T+I ++P ++
Sbjct:  246 KEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRILRDIELYYSTQIDEMPMNV 393

HSP 2 Score: 26.9498 bits (58), Expect = 2.493e-30
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 1 
Query:   28 DELTLKGITQYYAFVEERQ 84
            DELTL+GI QY+  VE+ +
Sbjct:  230 DELTLEGIKQYFIAVEKEE 248
[Close]
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: FAL1_ASPCL (ATP-dependent RNA helicase fal1 OS=Aspergillus clavatus GN=fal1 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.493e-30
Identity = 61/148 (41.22%), Postives = 93/148 (62.84%), Query Frame = 2 
Query:   74 KKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHI 517
            K+  K   L  L+  L I Q++IFCN+  +V+ L  K+ E  ++   +H +M Q  R+ +  DFR G  R L+ TD++ RGID+Q V++VIN+D P N E Y+HR+GRSGRFG  G+A+N +T +D   L  IE    T+I ++P ++
Sbjct:  247 KEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRILRDIELYYSTQIDEMPMNV 394

HSP 2 Score: 26.9498 bits (58), Expect = 2.493e-30
Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 1 
Query:   28 DELTLKGITQYYAFVEERQ 84
            DELTL+GI QY+  VE+ +
Sbjct:  231 DELTLEGIKQYFIAVEKEE 249
The following BLAST results are available for this feature:
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FAL1_CANAL2.493e-3042.76ATP-dependent RNA helicase FAL1 OS=Candida albican... [more]
IF4A_SCLS12.493e-3040.13ATP-dependent RNA helicase eIF4A OS=Sclerotinia sc... [more]
FAL1_SCLS12.493e-3041.89ATP-dependent RNA helicase fal1 OS=Sclerotinia scl... [more]
FAL1_NEOFI2.493e-3041.22ATP-dependent RNA helicase fal1 OS=Neosartorya fis... [more]
FAL1_EMENI2.493e-3041.22ATP-dependent RNA helicase fal1 OS=Emericella nidu... [more]
FAL1_ASPTN2.493e-3041.22ATP-dependent RNA helicase fal1 OS=Aspergillus ter... [more]
FAL1_ASPOR2.493e-3041.22ATP-dependent RNA helicase fal1 OS=Aspergillus ory... [more]
FAL1_ASPNC2.493e-3041.22ATP-dependent RNA helicase fal1 OS=Aspergillus nig... [more]
FAL1_ASPFU2.493e-3041.22ATP-dependent RNA helicase fal1 OS=Aspergillus fum... [more]
FAL1_ASPCL2.493e-3041.22ATP-dependent RNA helicase fal1 OS=Aspergillus cla... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00689 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00689 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623598 ID=BQ623598; Name=BQ623598; organism=Citrus sinensis; type=EST; length=636bp
CAAAAACCATATGTTATTAATCTGATGGATGAGCTTACTCTCAAGGGAAT
TACCCAATACTATGCTTTTGTTGAAGAAAGGCAGAAAGTCCACTTGCCTC
AACACACTTTTCTCTAAGTTGCAAATTAATCAATCTATCATTTTCTGCAA
TTCGGTGAATCGGGTTGAACTCCTTGCCAAGAAAATTACAGAACTTGGGT
ACTCTTGTTTTTATATCCATGCAAAGATGCTGCAAGACCATCGCAACAGA
GTATTTCATGACTTCCGCAATGGTGCATGCAGGAATCTTGTTTGTACTGA
CCTATTTACGAGGGGTATAGACATTCAAGCAGTGAATGTTGTCATTAACT
TTGATTTTCCTAAGAACTCGGAGACATATCTGCACAGAGTTGGTCGATCT
GGAAGGTTTGGACACCTTGGATTAGCTGTGAATTTGATTACTTACGAGGA
CCGCTTCAACTTGTATAGGATTGAGCAAGAACTCGGGACTGAAATTAAGC
AGATACCTCCGCATATTGATCAGGCAATTTACTGCAGGTGATTTATGGCC
GGTATCTTGCTATATAGCCAATGGTGGTAGCAATGGATTCCTGAGGCTGT
TGATTCAAGGCACTTGGCTCTGCAGCTGAGGAAGCA
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