BQ623618

Overview
NameBQ623618
Unique NameBQ623618
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623618 vs. ExPASy Swiss-Prot
Match: NUDL_SHIF8 (Uncharacterized Nudix hydrolase nudL OS=Shigella flexneri serotype 5b (strain 8401) GN=nudL PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.699e-12
Identity = 53/167 (31.74%), Postives = 82/167 (49.10%), Query Frame = 3
Query:  144 KRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNXXXXXXXXXXLPDRNSFIPAPNTAEVDAIFDAPLEMFLK-------DENRRAE-EREWMGYKYLLHFFNYEAEGTKYVIWALTAGI 620
            ++AAVL+ +       L   LT+RS +L  H+G+VA PGG  ++ DA     ALREA+EE+ + PS V V+ +L P+ +            +P    +  + +  EV A+F+ PL   L        D  RR +  R W+ +        YE    +Y +W +TAGI
Sbjct:   30 RQAAVLIPIVRRPQPGL--LLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLPPVDSVTGYQVTPVVGIIPPDLPYRASED--EVSAVFEMPLAQALHLGRYHPLDIYRRGDSHRVWLSW--------YE----QYFVWGMTAGI 180          
BLAST of BQ623618 vs. ExPASy Swiss-Prot
Match: NUDL_SHIDS (Uncharacterized Nudix hydrolase nudL OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=nudL PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.699e-12
Identity = 53/167 (31.74%), Postives = 82/167 (49.10%), Query Frame = 3
Query:  144 KRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNXXXXXXXXXXLPDRNSFIPAPNTAEVDAIFDAPLEMFLK-------DENRRAE-EREWMGYKYLLHFFNYEAEGTKYVIWALTAGI 620
            ++AAVL+ +       L   LT+RS +L  H+G+VA PGG  ++ DA     ALREA+EE+ + PS V V+ +L P+ +            +P    +  + +  EV A+F+ PL   L        D  RR +  R W+ +        YE    +Y +W +TAGI
Sbjct:   30 RQAAVLIPIVRRPQPGL--LLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLPPVDSVTGYQVTPVVGIIPPDLPYRASED--EVSAVFEMPLAQALHLGRYHPLDIYRRGDSHRVWLSW--------YE----QYFVWGMTAGI 180          
BLAST of BQ623618 vs. ExPASy Swiss-Prot
Match: NUDL_SHIBS (Uncharacterized Nudix hydrolase nudL OS=Shigella boydii serotype 4 (strain Sb227) GN=nudL PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.699e-12
Identity = 53/167 (31.74%), Postives = 82/167 (49.10%), Query Frame = 3
Query:  144 KRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNXXXXXXXXXXLPDRNSFIPAPNTAEVDAIFDAPLEMFLK-------DENRRAE-EREWMGYKYLLHFFNYEAEGTKYVIWALTAGI 620
            ++AAVL+ +       L   LT+RS +L  H+G+VA PGG  ++ DA     ALREA+EE+ + PS V V+ +L P+ +            +P    +  + +  EV A+F+ PL   L        D  RR +  R W+ +        YE    +Y +W +TAGI
Sbjct:   30 RQAAVLIPIVRRPQPGL--LLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLPPVDSVTGYQVTPVIGIIPPDLPYRASED--EVSAVFEMPLAQALHLGRYHPLDIYRRGDSHRVWLSW--------YE----QYFVWGMTAGI 180          
BLAST of BQ623618 vs. ExPASy Swiss-Prot
Match: NUDL_SHIB3 (Uncharacterized Nudix hydrolase nudL OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=nudL PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.699e-12
Identity = 53/167 (31.74%), Postives = 82/167 (49.10%), Query Frame = 3
Query:  144 KRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNXXXXXXXXXXLPDRNSFIPAPNTAEVDAIFDAPLEMFLK-------DENRRAE-EREWMGYKYLLHFFNYEAEGTKYVIWALTAGI 620
            ++AAVL+ +       L   LT+RS +L  H+G+VA PGG  ++ DA     ALREA+EE+ + PS V V+ +L P+ +            +P    +  + +  EV A+F+ PL   L        D  RR +  R W+ +        YE    +Y +W +TAGI
Sbjct:   30 RQAAVLIPIVRRPQPGL--LLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLPPVDSVTGYQVTPVVGIIPPDLPYRASED--EVSAVFEMPLAQALHLGRYHPLDIYRRGDSHRVWLSW--------YE----QYFVWGMTAGI 180          
BLAST of BQ623618 vs. ExPASy Swiss-Prot
Match: NUDL_PHOLL (Uncharacterized Nudix hydrolase nudL OS=Photorhabdus luminescens subsp. laumondii GN=nudL PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.699e-12
Identity = 56/171 (32.75%), Postives = 84/171 (49.12%), Query Frame = 3
Query:  129 VSSTKKRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNXXXXXXXXXXLPDRNSFIPAPNTAEVDAIFDAPLEMFLKDENRRAEEREWMGYKYLLHFFNYEAEGTKYVIWALTAGI**TLHQL 641
            +S   + AAVL+ +       L   LT+RS+ L SH+G+VA PGG  +  D     TALREA+EE+ +    V V+  L P+ +            LP   S     N AEV  IF+ PL   L   +    +    G ++ ++F+ Y+    +++IW LTA I   +HQL
Sbjct:   22 LSDNNRHAAVLLPIICKPKPTL--LLTRRSATLRSHAGQVAFPGGVADPKDKSIIATALREAEEEVNIPHQKVQVLGQLAPLNSSGGYLVTPIVGLLPPGLSL--HSNPAEVAKIFEVPLSEALSLSSYHYLDVSRRGQQHRVYFYWYQ----QHLIWGLTATI---IHQL 181          
BLAST of BQ623618 vs. ExPASy Swiss-Prot
Match: NUDL_ENT38 (Uncharacterized Nudix hydrolase nudL OS=Enterobacter sp. (strain 638) GN=nudL PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.699e-12
Identity = 47/160 (29.38%), Postives = 78/160 (48.75%), Query Frame = 3
Query:  141 KKRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNXXXXXXXXXXLPDRNSFIPAPNTAEVDAIFDAPLEMFLKDENRRAEEREWMGYKYLLHFFNYEAEGTKYVIWALTAGI 620
            +++AAVL+ L       L   LTKR+S++  H G+VA PGG  +  DA     ALREA EE+ + P +V ++ +L P+ +            +P    +    +  EV A+F+ PL   L+       + +  G+ + +    Y+     Y +W +TAGI
Sbjct:   29 RRQAAVLIPLVRREQPGL--LLTKRASHMRKHPGQVAFPGGAVDSTDASLIAAALREAHEEVAIPPEVVEIIGVLPPVDSVTGFQVTPVVGIIPPDLHY--HASEEEVAAVFEMPLSEALRLSRYHPLDIQRRGHDHRVWLSWYQ----HYFVWGMTAGI 180          
BLAST of BQ623618 vs. ExPASy Swiss-Prot
Match: NUDL_ECOUT (Uncharacterized Nudix hydrolase nudL OS=Escherichia coli (strain UTI89 / UPEC) GN=nudL PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.699e-12
Identity = 53/167 (31.74%), Postives = 82/167 (49.10%), Query Frame = 3
Query:  144 KRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNXXXXXXXXXXLPDRNSFIPAPNTAEVDAIFDAPLEMFLK-------DENRRAE-EREWMGYKYLLHFFNYEAEGTKYVIWALTAGI 620
            ++AAVL+ +       L   LT+RS +L  H+G+VA PGG  ++ DA     ALREA+EE+ + PS V V+ +L P+ +            +P    +  + +  EV A+F+ PL   L        D  RR +  R W+ +        YE    +Y +W +TAGI
Sbjct:   30 RQAAVLIPIVRRPQPGL--LLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLPPVDSVTGYQVTPVVGIIPPDLPYRASED--EVSAVFEMPLAQALHLGRYHPLDIYRRGDSHRVWLSW--------YE----QYFVWGMTAGI 180          
BLAST of BQ623618 vs. ExPASy Swiss-Prot
Match: NUDL_ECOSM (Uncharacterized Nudix hydrolase nudL OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=nudL PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.699e-12
Identity = 53/167 (31.74%), Postives = 82/167 (49.10%), Query Frame = 3
Query:  144 KRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNXXXXXXXXXXLPDRNSFIPAPNTAEVDAIFDAPLEMFLK-------DENRRAE-EREWMGYKYLLHFFNYEAEGTKYVIWALTAGI 620
            ++AAVL+ +       L   LT+RS +L  H+G+VA PGG  ++ DA     ALREA+EE+ + PS V V+ +L P+ +            +P    +  + +  EV A+F+ PL   L        D  RR +  R W+ +        YE    +Y +W +TAGI
Sbjct:   30 RQAAVLIPIVRRPQPGL--LLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAALREAEEEVAIPPSTVEVIGVLPPVDSVTGYQVTPVVGIIPPDLPYRASED--EVSAVFEMPLAQALHLGRYHPLDIYRRGDSHRVWLSW--------YE----QYFVWGMTAGI 180          
BLAST of BQ623618 vs. ExPASy Swiss-Prot
Match: NUDL_ECOSE (Uncharacterized Nudix hydrolase nudL OS=Escherichia coli (strain SE11) GN=nudL PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.699e-12
Identity = 53/167 (31.74%), Postives = 82/167 (49.10%), Query Frame = 3
Query:  144 KRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNXXXXXXXXXXLPDRNSFIPAPNTAEVDAIFDAPLEMFLK-------DENRRAE-EREWMGYKYLLHFFNYEAEGTKYVIWALTAGI 620
            ++AAVL+ +       L   LT+RS +L  H+G+VA PGG  ++ DA     ALREA+EE+ + PS V V+ +L P+ +            +P    +  + +  EV A+F+ PL   L        D  RR +  R W+ +        YE    +Y +W +TAGI
Sbjct:   30 RQAAVLIPIVRRPQPGL--LLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLPPVDSVTGYQVTPVVGIIPPDLPYRASED--EVSAVFEMPLAQALHLGRYHPLDIYRRGDSHRVWLSW--------YE----QYFVWGMTAGI 180          
BLAST of BQ623618 vs. ExPASy Swiss-Prot
Match: NUDL_ECOLU (Uncharacterized Nudix hydrolase nudL OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=nudL PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.699e-12
Identity = 53/167 (31.74%), Postives = 82/167 (49.10%), Query Frame = 3
Query:  144 KRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEEIGLDPSLVNVVTILDPIFTKNXXXXXXXXXXLPDRNSFIPAPNTAEVDAIFDAPLEMFLK-------DENRRAE-EREWMGYKYLLHFFNYEAEGTKYVIWALTAGI 620
            ++AAVL+ +       L   LT+RS +L  H+G+VA PGG  ++ DA     ALREA+EE+ + PS V V+ +L P+ +            +P    +  + +  EV A+F+ PL   L        D  RR +  R W+ +        YE    +Y +W +TAGI
Sbjct:   30 RQAAVLIPIVRRPQPGL--LLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLPPVDSVTGYQVTPVVGIIPPDLPYRASED--EVSAVFEMPLAQALHLGRYHPLDIYRRGDSHRVWLSW--------YE----QYFVWGMTAGI 180          
The following BLAST results are available for this feature:
BLAST of BQ623618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
NUDL_SHIF81.699e-1231.74Uncharacterized Nudix hydrolase nudL OS=Shigella f... [more]
NUDL_SHIDS1.699e-1231.74Uncharacterized Nudix hydrolase nudL OS=Shigella d... [more]
NUDL_SHIBS1.699e-1231.74Uncharacterized Nudix hydrolase nudL OS=Shigella b... [more]
NUDL_SHIB31.699e-1231.74Uncharacterized Nudix hydrolase nudL OS=Shigella b... [more]
NUDL_PHOLL1.699e-1232.75Uncharacterized Nudix hydrolase nudL OS=Photorhabd... [more]
NUDL_ENT381.699e-1229.38Uncharacterized Nudix hydrolase nudL OS=Enterobact... [more]
NUDL_ECOUT1.699e-1231.74Uncharacterized Nudix hydrolase nudL OS=Escherichi... [more]
NUDL_ECOSM1.699e-1231.74Uncharacterized Nudix hydrolase nudL OS=Escherichi... [more]
NUDL_ECOSE1.699e-1231.74Uncharacterized Nudix hydrolase nudL OS=Escherichi... [more]
NUDL_ECOLU1.699e-1231.74Uncharacterized Nudix hydrolase nudL OS=Escherichi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00709 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00709 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623618 ID=BQ623618; Name=BQ623618; organism=Citrus sinensis; type=EST; length=643bp
ACAACTCCGGAGATCGATCTGAAAGACTTGAAACACTAGTCCAGCGGCTT
CGTCTCTACAATGAGAGACACCAGAACCCTGTAACTGAAAGAGAAGCTGT
GGATTCTCAAGACTCATATTCTGTTGCAGTATCTTCAACCAAGAAGAGAG
CAGCAGTTCTTGTTTGTCTTTTTGAAGGAAATGATGGGGATCTACGTGTA
TTCCTCACTAAGCGATCCTCGAATCTGTCTTCTCACTCGGGGGAAGTTGC
ATTGCCAGGTGGGAAAAGGGAGGAAAACGATGCTGATGATGCGGGGACTG
CTTTGAGGGAGGCGAAGGAGGAGATTGGCTTGGACCCTTCTCTTGTCAAT
GTTGTTACCATTCTTGACCCAATTTTTACCAAGAATGGAATAATAGTAGT
TCCAGTGATTGGAATTCTTCCTGACAGAAACTCCTTCATTCCAGCTCCAA
ATACAGCTGAAGTAGATGCAATATTTGATGCGCCATTGGAAATGTTTCTA
AAGGATGAGAACAGGAGAGCAGAAGAGAGAGAATGGATGGGCTATAAGTA
TTTACTCCATTTCTTTAACTATGAAGCAGAGGGCACGAAATATGTGATAT
GGGCTTTAACAGCTGGAATCTGATAAACGTTGCATCAGTTGTA
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