BQ623626
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623626 vs. ExPASy Swiss-Prot
Match: H2A3_HUMAN (Histone H2A type 3 OS=Homo sapiens GN=HIST3H2A PE=1 SV=3) HSP 1 Score: 135.191 bits (339), Expect = 2.650e-31 Identity = 68/108 (62.96%), Postives = 78/108 (72.22%), Query Frame = 2 Query: 110 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 433 +K+ SRS +AGLQFPVGR+ R L+ G Y+ERVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNI LLPKK Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
BLAST of BQ623626 vs. ExPASy Swiss-Prot
Match: H2A1E_RAT (Histone H2A type 1-E OS=Rattus norvegicus PE=1 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 2.650e-31 Identity = 68/108 (62.96%), Postives = 78/108 (72.22%), Query Frame = 2 Query: 110 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 433 +K+ +RS +AGLQFPVGR+ R L+ G YAERVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNI LLPKK Sbjct: 13 AKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
BLAST of BQ623626 vs. ExPASy Swiss-Prot
Match: H2A_SEPOF (Histone H2A OS=Sepia officinalis PE=1 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 3.461e-31 Identity = 69/110 (62.73%), Postives = 78/110 (70.91%), Query Frame = 2 Query: 113 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 442 KS +RS +AGLQFPVGRI R L+ G YA+RVGAGAP GNAARDNKK+RI+PRH+QLA+RNDEEL+KLL VTIA GGVLPNI LLPKK K Sbjct: 13 KSKTRSSRAGLQFPVGRIHRLLRKGNYAQRVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTQK 122
BLAST of BQ623626 vs. ExPASy Swiss-Prot
Match: H2A_CRYNE (Histone H2A OS=Cryptococcus neoformans GN=HTA1 PE=3 SV=3) HSP 1 Score: 134.806 bits (338), Expect = 3.461e-31 Identity = 76/122 (62.30%), Postives = 85/122 (69.67%), Query Frame = 2 Query: 110 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 475 +KS SRS KAGLQFPVGRI R LK G YA+R+G+GAP GNAARDNKK+RIVPRH+QLAVRNDEEL+KLLGSV I+ GGVLP+I LLP K KGK ASQE Sbjct: 13 TKSSSRSSKAGLQFPVGRIHRLLKKGNYAQRIGSGAPVYLAAVLEYLAAEILELAGNAARDNKKSRIVPRHLQLAVRNDEELNKLLGSVVISQGGVLPHIMAELLPVKT-KGK---AKASQE 130
BLAST of BQ623626 vs. ExPASy Swiss-Prot
Match: H2A_CAEEL (Histone H2A OS=Caenorhabditis elegans GN=his-3 PE=1 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 3.461e-31 Identity = 70/112 (62.50%), Postives = 77/112 (68.75%), Query Frame = 2 Query: 113 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGK 448 K+ SRS +AGLQFPVGR+ R L+ G YA+RVGAGAP GNAARDNKK RI PRH+QLAVRNDEEL+KLL VTIA GGVLPNI LLPKK G K Sbjct: 15 KAKSRSSRAGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTGGDK 126
BLAST of BQ623626 vs. ExPASy Swiss-Prot
Match: H2A1_TETTH (Histone H2A.1 OS=Tetrahymena thermophila GN=HTA2 PE=1 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 3.461e-31 Identity = 68/112 (60.71%), Postives = 81/112 (72.32%), Query Frame = 2 Query: 107 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 442 +SK VSRS +AGLQFPVGRI+RFLK G+Y+ER+G GAP GNAA+DNKK RIVPRHI LA+RNDEEL+KL+ + TIA+GGVLPNI+ LLP K K Sbjct: 16 SSKQVSRSARAGLQFPVGRISRFLKNGRYSERIGTGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIVPRHILLAIRNDEELNKLMANTTIADGGVLPNINPMLLPSKTKK 127
BLAST of BQ623626 vs. ExPASy Swiss-Prot
Match: H2A1_TETPY (Histone H2A.1 OS=Tetrahymena pyriformis GN=HTA2 PE=1 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 3.461e-31 Identity = 68/112 (60.71%), Postives = 81/112 (72.32%), Query Frame = 2 Query: 107 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 442 +SK VSRS +AGLQFPVGRI+RFLK G+Y+ER+G GAP GNAA+DNKK RIVPRHI LA+RNDEEL+KL+ + TIA+GGVLPNI+ LLP K K Sbjct: 16 SSKQVSRSARAGLQFPVGRISRFLKNGRYSERIGTGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIVPRHILLAIRNDEELNKLMANTTIADGGVLPNINPMLLPSKTKK 127
BLAST of BQ623626 vs. ExPASy Swiss-Prot
Match: H2AO_CHITH (Histone H2A, orphon OS=Chironomus thummi thummi PE=3 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 4.520e-31 Identity = 69/113 (61.06%), Postives = 78/113 (69.03%), Query Frame = 2 Query: 110 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGK 448 +K+ SRS +AGLQFPVGRI R L+ G YAER+GAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLL VTIA GGVLPNI LLPKK K Sbjct: 12 AKAKSRSSRAGLQFPVGRIHRLLRKGHYAERIGAGAPVYLAAVMEYLGAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTESKK 124
BLAST of BQ623626 vs. ExPASy Swiss-Prot
Match: H2A4_RAT (Histone H2A type 4 OS=Rattus norvegicus PE=2 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 4.520e-31 Identity = 67/108 (62.04%), Postives = 77/108 (71.30%), Query Frame = 2 Query: 110 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 433 +K+ SRS +AGLQFPVGR+ R L+ G YAER+GAG P GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNI LLPKK Sbjct: 13 AKAKSRSFRAGLQFPVGRVHRLLRQGNYAERIGAGTPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
BLAST of BQ623626 vs. ExPASy Swiss-Prot
Match: H2A1D_HUMAN (Histone H2A type 1-D OS=Homo sapiens GN=HIST1H2AD PE=1 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 4.520e-31 Identity = 67/108 (62.04%), Postives = 78/108 (72.22%), Query Frame = 2 Query: 110 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 433 +K+ +RS +AGLQFPVGR+ R L+ G Y+ERVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNI LLPKK Sbjct: 13 AKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120 The following BLAST results are available for this feature:
BLAST of BQ623626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623626 ID=BQ623626; Name=BQ623626; organism=Citrus sinensis; type=EST; length=625bpback to top |