BQ623626
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623626 vs. ExPASy Swiss-Prot
Match: H2A4_ORYSI (Probable histone H2A.4 OS=Oryza sativa subsp. indica GN=OsI_019561 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.397e-32 Identity = 69/109 (63.30%), Postives = 79/109 (72.48%), Query Frame = 2 Query: 113 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVG 439 K VSRS KAGLQFPVGRI R+LK G+Y++R+G GAP GNAARDNKKNRI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ LLPKK G Sbjct: 25 KPVSRSVKAGLQFPVGRIGRYLKQGRYSQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTG 133
BLAST of BQ623626 vs. ExPASy Swiss-Prot
Match: H2A_SIPNU (Histone H2A OS=Sipunculus nudus PE=1 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.130e-32 Identity = 71/112 (63.39%), Postives = 78/112 (69.64%), Query Frame = 2 Query: 113 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGK 448 KS SRS +AGLQFPVGRI R L+ G YAER+GAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLL VTIA GGVLPNI LLPKK K K Sbjct: 13 KSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTQKSK 124
BLAST of BQ623626 vs. ExPASy Swiss-Prot
Match: H2A_ACRFO (Histone H2A OS=Acropora formosa PE=3 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.130e-32 Identity = 72/113 (63.72%), Postives = 80/113 (70.80%), Query Frame = 2 Query: 104 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 442 + +KS SRS +AGLQFPVGRI R L+ G YAERVGAGAP GNAARDNKK+RI+PRH+QLAVRNDEEL+KLL VTIA GGVLPNI LLPKK K Sbjct: 10 QGTKSKSRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYMAAVLEYLSAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTEK 122
BLAST of BQ623626 vs. ExPASy Swiss-Prot
Match: H2A1_MEDTR (Probable histone H2A.1 OS=Medicago truncatula GN=MtrDRAFT_AC149210g1v1 PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.130e-32 Identity = 73/120 (60.83%), Postives = 83/120 (69.17%), Query Frame = 2 Query: 113 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQ 472 KSV+RS +AGLQFPVGRI R+LK G+YA+RVG GAP GNAARDNKKNRI+PRH+ LAVRNDEEL KLL VTIA+GGVLPNI+ LLPKK K S S+ Sbjct: 21 KSVTRSTRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKNEKAATTTKSPSK 140
BLAST of BQ623626 vs. ExPASy Swiss-Prot
Match: H2A2_MEDTR (Probable histone H2A.2 OS=Medicago truncatula GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.088e-32 Identity = 70/107 (65.42%), Postives = 79/107 (73.83%), Query Frame = 2 Query: 113 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 433 KSV+RS +AGLQFPVGRI R+LK G+YA+RVG GAP GNAARDNKKNRI+PRH+ LAVRNDEEL KLL VTIA+GGVLPNI+ LLPKK Sbjct: 22 KSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 128
BLAST of BQ623626 vs. ExPASy Swiss-Prot
Match: H2A_STRPU (Histone H2A, embryonic OS=Strongylocentrotus purpuratus PE=1 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 5.339e-32 Identity = 69/111 (62.16%), Postives = 80/111 (72.07%), Query Frame = 2 Query: 110 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 442 +K+ +RS +AGLQFPVGR+ RFL+ G YA+RVG GAP GNAARDNKK+RI+PRH+QLAVRNDEEL+KLLG VTIA GGVLPNI LLPKK K Sbjct: 12 TKAKTRSSRAGLQFPVGRVHRFLRKGNYAKRVGGGAPVYMAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTAK 122
BLAST of BQ623626 vs. ExPASy Swiss-Prot
Match: H2A_PLADU (Histone H2A OS=Platynereis dumerilii PE=3 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 5.339e-32 Identity = 71/112 (63.39%), Postives = 78/112 (69.64%), Query Frame = 2 Query: 113 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGK 448 KS +RS +AGLQFPVGRI R L+ G YAERVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLL VTIA GGVLPNI LLPKK K K Sbjct: 13 KSKTRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTTKAK 124
BLAST of BQ623626 vs. ExPASy Swiss-Prot
Match: H2A_CAIMO (Histone H2A OS=Cairina moschata PE=3 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 5.339e-32 Identity = 70/113 (61.95%), Postives = 79/113 (69.91%), Query Frame = 2 Query: 110 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGK 448 +K+ SRS +AGLQFPVGR+ R L+ G YAERVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNI LLPKK K Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTDSHK 125
BLAST of BQ623626 vs. ExPASy Swiss-Prot
Match: H2AX_XENLA (Histone H2A.x OS=Xenopus laevis GN=h2afx PE=1 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 5.339e-32 Identity = 71/122 (58.20%), Postives = 82/122 (67.21%), Query Frame = 2 Query: 110 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 475 +K+ +RS +AGLQFPVGR+ R L+ G YA RVGAGAP GNAARDNKK+RI+PRH+QLAVRNDEEL+KLLG VTIA GGVLPNI LLPKK G G S + Sbjct: 13 AKAKTRSSRAGLQFPVGRVHRLLRKGNYAHRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKSSGGVSTSGKKSSQ 134
BLAST of BQ623626 vs. ExPASy Swiss-Prot
Match: H2AL_STRPU (Late histone H2A.L3 OS=Strongylocentrotus purpuratus PE=1 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 5.339e-32 Identity = 70/111 (63.06%), Postives = 79/111 (71.17%), Query Frame = 2 Query: 110 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 442 +K+ SRS +AGLQFPVGR+ RFL+ G YA+RVGAGAP GNAARDNKK RI+PRH+QLAVRNDEEL+KLL VTIA GGVLPNI LLPKK K Sbjct: 13 AKAKSRSARAGLQFPVGRVHRFLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTSK 123 The following BLAST results are available for this feature:
BLAST of BQ623626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623626 ID=BQ623626; Name=BQ623626; organism=Citrus sinensis; type=EST; length=625bpback to top |