BQ623627
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623627 vs. ExPASy Swiss-Prot
Match: MDH_HALHL (Malate dehydrogenase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=mdh PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.438e-27 Identity = 55/91 (60.44%), Postives = 65/91 (71.43%), Query Frame = 3
Query: 114 AIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 386
AIIKAR DH+RDW LGTPEG W SM V SDGSY + AGLIYSFPVTCR G++ IV GLS+D+FSR ++D TA EL+EE+
Sbjct: 228 AIIKARGASSAASAASAAIDHMRDWALGTPEGEWTSMAVPSDGSYGIEAGLIYSFPVTCRGGDYKIVSGLSVDDFSRARMDQTAAELAEER 318 HSP 2 Score: 26.9498 bits (58), Expect = 2.438e-27 Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 2
Query: 59 DDAWLNGEFITTVQQRGA 112
+ AW+ FI TVQQRGA
Sbjct: 210 EHAWVKDTFIPTVQQRGA 227
BLAST of BQ623627 vs. ExPASy Swiss-Prot
Match: MDH_ALCBS (Malate dehydrogenase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=mdh PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.131e-27 Identity = 53/91 (58.24%), Postives = 65/91 (71.43%), Query Frame = 3
Query: 114 AIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 386
AIIKAR DH+R W LGT EG WVSMG+YSDGSY + GLIYSFP TC+NG+WTIVQGL +++FSR K+ T +EL+EE+
Sbjct: 230 AIIKARGASSAASAANAAVDHMRSWALGTDEGDWVSMGIYSDGSYGIQEGLIYSFPCTCKNGDWTIVQGLEVNDFSRGKMQATEQELAEER 320 HSP 2 Score: 24.6386 bits (52), Expect = 4.131e-27 Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 2
Query: 68 WLNGEFITTVQQRGA 112
W ++I TVQQRGA
Sbjct: 215 WYENDYIPTVQQRGA 229
BLAST of BQ623627 vs. ExPASy Swiss-Prot
Match: MDH_DEIGD (Malate dehydrogenase OS=Deinococcus geothermalis (strain DSM 11300) GN=mdh PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 5.376e-27 Identity = 55/91 (60.44%), Postives = 65/91 (71.43%), Query Frame = 3
Query: 114 AIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 386
AII+AR DH+RDW LGTPEG WVSM V SDGSY +P GLIY FPV CRNG++ IVQGL I +FSR+K+D TA+EL EE+
Sbjct: 234 AIIEARGASSAASAASAAIDHMRDWALGTPEGEWVSMAVPSDGSYGIPEGLIYGFPVRCRNGQYEIVQGLEISDFSRQKMDATAKELEEER 324 HSP 2 Score: 25.0238 bits (53), Expect = 5.376e-27 Identity = 16/37 (43.24%), Postives = 21/37 (56.76%), Query Frame = 2
Query: 2 NHATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGA 112
+ ATVN +P +LV D W E+I TV +RGA
Sbjct: 202 SQATVNG----QPALDLV-DREWYEKEYIPTVAKRGA 233
BLAST of BQ623627 vs. ExPASy Swiss-Prot
Match: MDH_TERTT (Malate dehydrogenase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=mdh PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 4.432e-26 Identity = 53/91 (58.24%), Postives = 62/91 (68.13%), Query Frame = 3
Query: 114 AIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 386
AIIKAR H+RDW LG+PEG WVSMGVYSDGSY + GLIYSFP C+NG+W IVQGLSIDEFS+ ++ T EL E+
Sbjct: 228 AIIKARGASSAASAANAAIFHMRDWALGSPEGDWVSMGVYSDGSYGIEKGLIYSFPCVCKNGDWEIVQGLSIDEFSQARMTATETELQGER 318 HSP 2 Score: 26.5646 bits (57), Expect = 4.432e-26 Identity = 11/18 (61.11%), Postives = 12/18 (66.67%), Query Frame = 2
Query: 59 DDAWLNGEFITTVQQRGA 112
D W E+I TVQQRGA
Sbjct: 210 DSTWYAEEYIPTVQQRGA 227
BLAST of BQ623627 vs. ExPASy Swiss-Prot
Match: MDH_NOCFA (Malate dehydrogenase OS=Nocardia farcinica GN=mdh PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.767e-26 Identity = 49/91 (53.85%), Postives = 60/91 (65.93%), Query Frame = 3
Query: 114 AIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 386
AII+AR DHI DWVLGTP G W SM V SDGSY VP GLI SFPVTC +G + IV+GL +D FSR+++D + EL+ E+
Sbjct: 233 AIIQARGASSAASAASAAIDHIHDWVLGTPAGEWTSMAVPSDGSYGVPDGLISSFPVTCADGAYRIVEGLEVDAFSRERIDASVAELTAER 323 HSP 2 Score: 36.965 bits (84), Expect = 5.767e-26 Identity = 24/44 (54.55%), Postives = 29/44 (65.91%), Query Frame = 2
Query: 5 HATVNTAAGEKPVRELVKDDAWLNGEFITTVQQRGAGNHQSQKA 136
HATV AG +P RELV D+ WL +FI TVQQRG Q++ A
Sbjct: 202 HATV---AG-RPARELV-DEQWLREDFIPTVQQRGTAIIQARGA 240
BLAST of BQ623627 vs. ExPASy Swiss-Prot
Match: MDH_DEIDV (Malate dehydrogenase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=mdh PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 1.655e-25 Identity = 54/91 (59.34%), Postives = 63/91 (69.23%), Query Frame = 3
Query: 114 AIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 386
AII+AR DH+RDW LGT EG WVSMG+ SDGSY VP GLIY FPVT ++G++ IVQGL I EFSR K+D TA EL EE+
Sbjct: 230 AIIEARGASSAASAASAAIDHMRDWALGTSEGEWVSMGIPSDGSYGVPEGLIYGFPVTVKDGKYQIVQGLEISEFSRGKMDATARELEEER 320 HSP 2 Score: 26.1794 bits (56), Expect = 1.655e-25 Identity = 13/28 (46.43%), Postives = 17/28 (60.71%), Query Frame = 2
Query: 29 GEKPVRELVKDDAWLNGEFITTVQQRGA 112
G +P +LV D W E+I TV +RGA
Sbjct: 203 GGRPALDLV-DRTWYEQEYIPTVAKRGA 229
BLAST of BQ623627 vs. ExPASy Swiss-Prot
Match: MDH_MYCPA (Malate dehydrogenase OS=Mycobacterium paratuberculosis GN=mdh PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.655e-25 Identity = 53/91 (58.24%), Postives = 62/91 (68.13%), Query Frame = 3
Query: 114 AIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 386
AII AR D RDW+LGTP G WVSM V SDGSY VP GLI SFPVT ++G+WTIVQGL IDEFSR ++D T EL++E+
Sbjct: 230 AIIDARGASSAASAASATTDAARDWLLGTPAGDWVSMAVISDGSYGVPEGLISSFPVTTKDGDWTIVQGLEIDEFSRSRIDKTTAELADER 320 HSP 2 Score: 28.4906 bits (62), Expect = 1.655e-25 Identity = 12/26 (46.15%), Postives = 16/26 (61.54%), Query Frame = 2
Query: 35 KPVRELVKDDAWLNGEFITTVQQRGA 112
K E+V D W+ +FI TV +RGA
Sbjct: 204 KNAAEVVGDQNWIENDFIPTVAKRGA 229
BLAST of BQ623627 vs. ExPASy Swiss-Prot
Match: MDH_MYCA1 (Malate dehydrogenase OS=Mycobacterium avium (strain 104) GN=mdh PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.655e-25 Identity = 53/91 (58.24%), Postives = 62/91 (68.13%), Query Frame = 3
Query: 114 AIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 386
AII AR D RDW+LGTP G WVSM V SDGSY VP GLI SFPVT ++G+WTIVQGL IDEFSR ++D T EL++E+
Sbjct: 230 AIIDARGASSAASAASATTDAARDWLLGTPAGDWVSMAVISDGSYGVPEGLISSFPVTTKDGDWTIVQGLEIDEFSRSRIDKTTAELADER 320 HSP 2 Score: 28.4906 bits (62), Expect = 1.655e-25 Identity = 12/26 (46.15%), Postives = 16/26 (61.54%), Query Frame = 2
Query: 35 KPVRELVKDDAWLNGEFITTVQQRGA 112
K E+V D W+ +FI TV +RGA
Sbjct: 204 KNAAEVVGDQNWIENDFIPTVAKRGA 229
BLAST of BQ623627 vs. ExPASy Swiss-Prot
Match: MDH_ALHEH (Malate dehydrogenase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=mdh PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.155e-25 Identity = 53/91 (58.24%), Postives = 62/91 (68.13%), Query Frame = 3
Query: 114 AIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEK 386
AIIKAR DHIRDWVLGTPEG W SM V SDGSY + G+IYS+P CRNG++ IVQ L IDEFSR+K+ T +EL EE+
Sbjct: 228 AIIKARGASSAASAASSAIDHIRDWVLGTPEGEWTSMAVPSDGSYGIEKGIIYSYPCVCRNGDYEIVQDLEIDEFSREKMQATEKELVEER 318 HSP 2 Score: 26.1794 bits (56), Expect = 2.155e-25 Identity = 13/21 (61.90%), Postives = 15/21 (71.43%), Query Frame = 2
Query: 50 LVKDDAWLNGEFITTVQQRGA 112
LV+ D W +FI TVQQRGA
Sbjct: 208 LVERD-WYENDFIPTVQQRGA 227
BLAST of BQ623627 vs. ExPASy Swiss-Prot
Match: MDH_ARTAT (Malate dehydrogenase OS=Arthrobacter aurescens (strain TC1) GN=mdh PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 3.650e-25 Identity = 51/92 (55.43%), Postives = 63/92 (68.48%), Query Frame = 3
Query: 114 AIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLSIDEFSRKKLDLTAEELSEEKA 389
AII+AR D RDW+LGTPEG WVSM V SDGSY VP GL+YS+PVT G W IV+GL +++FSR+K+D TA EL +E+A
Sbjct: 229 AIIEARGASSAASAASATIDAARDWLLGTPEGDWVSMAVASDGSYGVPEGLMYSYPVTTSGGNWEIVEGLEVNDFSRRKMDATAAELFDERA 320 HSP 2 Score: 28.4906 bits (62), Expect = 3.650e-25 Identity = 12/22 (54.55%), Postives = 14/22 (63.64%), Query Frame = 2
Query: 47 ELVKDDAWLNGEFITTVQQRGA 112
E+V D W+ EFI TV RGA
Sbjct: 207 EVVNDQDWIENEFIPTVAGRGA 228 The following BLAST results are available for this feature:
BLAST of BQ623627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623627 ID=BQ623627; Name=BQ623627; organism=Citrus sinensis; type=EST; length=715bpback to top |