BQ623628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_PYRCJ (30S ribosomal protein S5P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps5p PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.317e-23 Identity = 58/128 (45.31%), Postives = 87/128 (67.97%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 KIR++++I+ ++L IKE +I+D L+ LK E++ + VQ+QT AG+R +F+A V VG+ DG+VG+G+ S++V AI A AKL++ PVRR G W PH+VP V+GK GSV V ++P P Sbjct: 23 KIRTIDEIFANNLLIKEPEIVDILLPG-LKQELLNLNLVQRQTHAGERNQFQAVVAVGNEDGYVGVGIGKSRQVRQAIEKATREAKLNITPVRRGCGSWKCSCDEPHSVPFVVSGKSGSVEVTLIPAP 149
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_HYPBU (30S ribosomal protein S5P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps5p PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.721e-23 Identity = 60/128 (46.88%), Postives = 83/128 (64.84%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 +IRSL +I+ +LPI E +I+D LIG +LK E + + VQK T AG+ RF+ VV+G+ +G VG+G ++++A AI AI AKL++IPVRR G W PH+VP V GK GSV V + P P Sbjct: 26 RIRSLSEIFEKNLPILEPEIVDYLIGPELKSETVDVRLVQKMTDAGRINRFRVVVVIGNENGFVGVGQGKARQLAVAIEKAIRNAKLNIIPVRRGCGSWECLCSEPHSVPFTVRGKSGSVEVILKPAP 153
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_PYRIL (30S ribosomal protein S5P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps5p PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.935e-23 Identity = 57/128 (44.53%), Postives = 86/128 (67.19%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 KIR++++I+ ++ IKE +I+D L+ LK E++ I VQ+QT AG+R++F+ V VG+ DG+VG+G+ +K+V AI A+ AKL++ PVRR G W PH+VP V GK GSV V ++P P Sbjct: 23 KIRTIDEIFANNYIIKEPEIVDILLPG-LKQEILNINVVQRQTHAGERSQFQVVVAVGNEDGYVGVGIGKAKQVRQAIEKAVREAKLNLTPVRRGCGSWKCSCDEPHSVPFVVRGKSGSVEVTLIPAP 149
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_METMA (30S ribosomal protein S5P OS=Methanosarcina mazei GN=rps5p PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.935e-23 Identity = 59/128 (46.09%), Postives = 85/128 (66.41%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 ++ S+++ LPI+E QIID L+ L+DEV+ I VQ+ T +G+R +F+A V+VG+ +G+VGLG +V AIR AI AKL++ +RR G W G PHTVP +VTGK GSV+V ++P P Sbjct: 21 QVASMDEAIKSGLPIREPQIIDMLLPD-LEDEVLDINMVQRMTDSGRRVKFRATVIVGNRNGYVGLGQAKDVQVGPAIRKAIDAAKLNITYIRRGCGSWECACGLPHTVPYEVTGKAGSVSVTLIPAP 147
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_METAC (30S ribosomal protein S5P OS=Methanosarcina acetivorans GN=rps5p PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.935e-23 Identity = 59/128 (46.09%), Postives = 85/128 (66.41%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 ++ S+++ LPI+E QIID L+ L+DEV+ I VQ+ T +G+R +F+A V+VG+ +G+VGLG +V AIR AI AKL++ +RR G W G PHTVP +VTGK GSV+V ++P P Sbjct: 21 QVASMDEAIKSGLPIREPQIIDMLLPD-LEDEVLDINMVQRMTDSGRRVKFRATVIVGNRNGYVGLGQAKDVQVGPAIRKAIDAAKLNITYIRRGCGSWECACGLPHTVPYEVTGKAGSVSVTLIPAP 147
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_PYRAR (30S ribosomal protein S5P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps5p PE=3 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 3.833e-23 Identity = 56/128 (43.75%), Postives = 87/128 (67.97%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 KIR++++++ ++ IKE +I+D L+ LK E++ + VQ+QT AG+R+ F+A V VG+ DG+VG+G+ +++V AI A+ AKL++IPVRR G W PH+VP V GK GSV V ++P P Sbjct: 23 KIRTIDEVFANNYIIKEPEIVDILVPG-LKQELLNVNIVQRQTHAGERSLFQAVVAVGNEDGYVGVGIGKARQVRQAIEKAVREAKLNLIPVRRGCGSWKCSCDEPHSVPFVVKGKSGSVEVTLIPAP 149
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_METKA (30S ribosomal protein S5P OS=Methanopyrus kandleri GN=rps5p PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.833e-23 Identity = 55/128 (42.97%), Postives = 86/128 (67.19%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 +I+++++++ I E +I+D L+ L++EV+ + VQK ++G+R RF+ VVVG+ DG VG+G ++EV AIR AI AKL++I VRR G W GRPH++P ++TGKCGSV + + P P Sbjct: 24 EIKTIDEVFAQGWKILEPEIVDWLLPD-LEEEVLDVNMVQKMHKSGRRVRFRVTVVVGNKDGFVGVGQGKAREVGPAIRAAIDRAKLNIIKVRRGCGSWECGCGRPHSIPFEITGKCGSVRITLKPAP 150
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_THEAC (30S ribosomal protein S5P OS=Thermoplasma acidophilum GN=rps5p PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.006e-23 Identity = 58/128 (45.31%), Postives = 84/128 (65.62%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 +I+++ + LP+KEY+I+D L+ + LKDEV+ I Q+ T +G+R + VVVG+ DG+VGLG+ SKE A AIR A+I AKL+++ +RR G W GR HT+P V GK GSV + + P P Sbjct: 19 QIKTMGEALRSKLPLKEYEIVDYLLPN-LKDEVIDIKRAQRMTDSGRRMTYSITVVVGNGDGYVGLGIGRSKEAAPAIRKALINAKLNIMEIRRGCGSWECGCGRAHTLPFLVQGKSGSVRITLKPAP 145
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_THEVO (30S ribosomal protein S5P OS=Thermoplasma volcanium GN=rps5p PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.538e-23 Identity = 56/128 (43.75%), Postives = 84/128 (65.62%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 +I+++ + LP+KEY+I+D L+ + +KDEV+ I Q+ T +G+R + VVVG+ DG++GLG+ SKE A AIR A+I AKL+++ +RR G W GR HT+P V GK GSV + + P P Sbjct: 19 QIKTISEALKTKLPLKEYEIVDYLLPN-IKDEVIDIKRAQRMTDSGRRMTYSITVVVGNEDGYIGLGIGRSKEAAPAIRKALINAKLNIMEIRRGCGSWECGCGRAHTLPFLVEGKSGSVRITLKPAP 145
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_METBF (30S ribosomal protein S5P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps5p PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.538e-23 Identity = 59/128 (46.09%), Postives = 83/128 (64.84%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 ++ S+E+ LPI+E QIID L+ L+DEV+ I VQ+ T +G+R +F+A V+VG+ +G+VGLG +V AIR AI AKL + + R G W G PHTVP +VTGK GSV+V ++P P Sbjct: 21 QVASMEEAIKSGLPIREPQIIDMLLPD-LEDEVLDINMVQRMTDSGRRVKFRATVIVGNRNGYVGLGQAKDVQVGPAIRKAIDAAKLDITYIHRGCGSWECACGLPHTVPYEVTGKAGSVSVTLIPAP 147 The following BLAST results are available for this feature:
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623628 ID=BQ623628; Name=BQ623628; organism=Citrus sinensis; type=EST; length=413bpback to top |