BQ623628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_METVS (30S ribosomal protein S5P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps5p PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.966e-20 Identity = 54/127 (42.52%), Postives = 80/127 (62.99%), Query Frame = 1 Query: 4 IRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--RGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 I + I LP+ E +I+D L+ L+++V+ + VQ+ ++G+R R++A VVVG+ +G+VG+G+ SKEV AIR AI AKLS+I VR G W G PH++P G CGSV V ++P P Sbjct: 31 ISDISYIMDKGLPLLEPEIVDVLLPD-LEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAQAKLSLIKVRVGCGSWECGCGSPHSIPFTAKGTCGSVKVELLPAP 156
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_METVA (30S ribosomal protein S5P OS=Methanococcus vannielii GN=rps5p PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.966e-20 Identity = 54/127 (42.52%), Postives = 80/127 (62.99%), Query Frame = 1 Query: 4 IRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--RGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 I + I LP+ E +I+D L+ L+++V+ + VQ+ ++G+R R++A VVVG+ +G+VG+G+ SKEV AIR AI AKLS+I VR G W G PH++P G CGSV V ++P P Sbjct: 31 ISDISYIMDKGLPLLEPEIVDVLLPD-LEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAQAKLSLIKVRVGCGSWECGCGSPHSIPFTAKGTCGSVKVELLPAP 156
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_METMP (30S ribosomal protein S5P OS=Methanococcus maripaludis GN=rps5p PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.180e-20 Identity = 54/127 (42.52%), Postives = 80/127 (62.99%), Query Frame = 1 Query: 4 IRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--RGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 I + I LP+ E +I+D L+ L+++V+ + VQ+ ++G+R R++A VVVG+ +G+VG+G+ SKEV AIR AI AKLS+I VR G W G PH++P G CGSV V ++P P Sbjct: 31 ISDISYIMDKGLPLLEPEIVDALLPD-LEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWECGCGSPHSIPFTAKGACGSVKVELLPAP 156
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_METM6 (30S ribosomal protein S5P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rps5p PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.180e-20 Identity = 54/127 (42.52%), Postives = 80/127 (62.99%), Query Frame = 1 Query: 4 IRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--RGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 I + I LP+ E +I+D L+ L+++V+ + VQ+ ++G+R R++A VVVG+ +G+VG+G+ SKEV AIR AI AKLS+I VR G W G PH++P G CGSV V ++P P Sbjct: 35 ISDINYIMDKGLPLLEPEIVDALLPD-LEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWECGCGSPHSIPFTAKGACGSVKVELLPAP 160
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_METM7 (30S ribosomal protein S5P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps5p PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.766e-20 Identity = 54/127 (42.52%), Postives = 80/127 (62.99%), Query Frame = 1 Query: 4 IRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--RGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 I + I LP+ E +I+D L+ L+++V+ + VQ+ ++G+R R++A VVVG+ +G+VG+G+ SKEV AIR AI AKLS+I VR G W G PH++P G CGSV V ++P P Sbjct: 35 ISDINYIMDKGLPLLEPEIVDALLPD-LEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRIGCGSWECGCGYPHSIPFTAKGACGSVKVELLPAP 160
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_METMJ (30S ribosomal protein S5P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps5p PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.154e-19 Identity = 54/128 (42.19%), Postives = 80/128 (62.50%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 +I S++++ PIKE QI+D L+ L+DEV+ I VQ+ T +G+R +F+ VVVG+ +G+VG G +V AI+ AI+ AKL++I V R G W H++P +VTGK GSV V + P P Sbjct: 22 EITSIDEVLASGRPIKEPQIVDLLLPD-LEDEVLDINMVQRMTDSGRRVKFRTVVVVGNRNGYVGFGQGKDVQVGNAIQKAIVNAKLNLIKVSRGCGSWECGCETAHSIPIEVTGKAGSVKVTLKPAP 148
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_METLZ (30S ribosomal protein S5P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps5p PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.154e-19 Identity = 54/125 (43.20%), Postives = 78/125 (62.40%), Query Frame = 1 Query: 10 SLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 S ++I PIKE I+D ++ L DEV+ I +Q+ T +G+R +F+A VV+G+ +G+VG G +V TAI+ AI AKL+++ VRR G W G H+VP +VTGK GSV V + P P Sbjct: 25 SFDEILASGQPIKEAGIVDAMLPD-LVDEVLCIDMMQRMTDSGRRIKFRAVVVIGNKNGYVGFGQGRDVQVGTAIKKAITNAKLNIVKVRRGCGSWECGCGMKHSVPMEVTGKAGSVAVTLKPAP 148
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_PYRKO (30S ribosomal protein S5P OS=Pyrococcus kodakaraensis GN=rps5p PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.507e-19 Identity = 51/131 (38.93%), Postives = 79/131 (60.31%), Query Frame = 1 Query: 1 KIRSLEQIYLHSLPIKEYQIIDTLIGH---KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 +I + +I+ IKE +I+D L+ + EV+ I + T +G+R RF+ VG+ DG+VGLG+ +EV AIR AI AK+++I ++R G W + RPH++P V GK GSV V+++PGP Sbjct: 29 QITDIHEIFRKGYQIKEPEIVDVLLPEVNLRENQEVLDIALTVRMTDSGRRIRFRVLAAVGNRDGYVGLGIGHGREVGIAIRKAINYAKMNIIEIKRGCGSWECRCRRPHSIPFAVEGKEGSVRVKLMPGP 159
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_METM5 (30S ribosomal protein S5P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps5p PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.507e-19 Identity = 53/127 (41.73%), Postives = 79/127 (62.20%), Query Frame = 1 Query: 4 IRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--RGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 I + I LP+ E +I+D L+ L+++V+ + VQ+ ++G+R R++A V VG+ +G+VG+G+ SKEV AIR AI AKLS+I VR G W G PH++P G CGSV V ++P P Sbjct: 35 ISDISYIMDKGLPLLEPEIVDALLPD-LEEQVLDVKLVQRMHKSGRRARYRATVAVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWECGCGSPHSIPFAAKGACGSVKVELLPAP 160
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Match: RS5_META3 (30S ribosomal protein S5P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps5p PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.969e-19 Identity = 53/127 (41.73%), Postives = 79/127 (62.20%), Query Frame = 1 Query: 4 IRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPGP 378 I ++ I + LP+ E +I+D L+ L+++V+ + VQ+ ++G+R RF+A VVG+ +G VG+G+ SKEV AIR AI AKLS+I VR G W G H++P G CGSV V ++P P Sbjct: 28 ITDIDYIIDNGLPLLEPEIVDALLPD-LEEQVLDVSLVQRMHKSGRRARFRATAVVGNRNGFVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRTGCGSWECGCGTAHSIPFAAKGSCGSVKVELLPAP 153 The following BLAST results are available for this feature:
BLAST of BQ623628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623628 ID=BQ623628; Name=BQ623628; organism=Citrus sinensis; type=EST; length=413bpback to top |