BQ623644

Overview
NameBQ623644
Unique NameBQ623644
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length421
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13
Identity = 41/109 (37.61%), Postives = 64/109 (58.72%), Query Frame = 3
Query:  117 GFKVPRGTMLLVNSWAIQNDPRIW-EEPSKFKPERFRE----MAGKSDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEW-VRTG--GDELVDMSEGTGLTMPR 419
            G+ +  GT +++N+WAIQ D   W  +  +F+PER  +      G++ KY  +PFG GRR+CPG GL   +  + L +LV+ F+W V  G  G +  D+ EG G+ + R
Sbjct:  380 GYDITAGTQVIINAWAIQRDTATWGSDAQEFRPERHFDSTWDFVGRNFKY--IPFGAGRRLCPGIGLGSVMASVTLANLVKRFDWRVEDGPSGYDKPDLVEGAGIDVCR 486          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: CP17A_CAPHI (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Capra hircus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.639e-13
Identity = 32/83 (38.55%), Postives = 47/83 (56.63%), Query Frame = 3
Query:  111 IGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERFREMAGK---SDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCF 350
            IG   + +GT ++VN WA+ ++ + W++P  F PERF +  G    S     LPFG G R C GE LA + + L +  L+Q F
Sbjct:  381 IGDLTIDKGTDVVVNLWALHHNEKEWQQPDLFMPERFLDPTGTQLISPSLSYLPFGAGPRSCVGEMLARQELFLFMSRLLQRF 463          

HSP 2 Score: 33.8834 bits (76), Expect = 1.639e-13
Identity = 14/31 (45.16%), Postives = 20/31 (64.52%), Query Frame = 2
Query:    2 SDLTALPYLHGVIKETLRMYPAAPLLVPHES 94
            SD   L  L   I+E LR+ P AP+L+PH++
Sbjct:  345 SDRNCLVLLEATIREVLRIRPVAPMLIPHKA 375          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: CP2D4_RAT (Cytochrome P450 2D4 OS=Rattus norvegicus GN=Cyp2d4 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 1.640e-13
Identity = 40/109 (36.70%), Postives = 55/109 (50.46%), Query Frame = 3
Query:   99 RSAPIGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERFREMAGKSDKY-MLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEW-VRTGGDELVDMSEGTGLTMPR 419
            R   + GF +P+GT L+ N  ++  D  +WE+P +F PE F +  G   K+   +PF  GRR C GE LA   + L    L+Q F + V TG     D      LT PR
Sbjct:  383 RDIEVQGFLIPKGTTLITNLSSVLKDETVWEKPLRFHPEHFLDAQGNFVKHEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVPTGQPRPSDYGIFGALTTPR 491          

HSP 2 Score: 28.4906 bits (62), Expect = 1.640e-13
Identity = 13/40 (32.50%), Postives = 21/40 (52.50%), Query Frame = 2
Query:    2 SDLTALPYLHGVIKETLRMYPAAPLLVPHESSEECTYRRF 121
            +D   +P+ + VI E  R     PL VPH++S +   + F
Sbjct:  351 ADQARMPFTNAVIHEVQRFADILPLGVPHKTSRDIEVQGF 390          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: CP1A1_BALAC (Cytochrome P450 1A1 OS=Balaenoptera acutorostrata GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.091e-13
Identity = 49/138 (35.51%), Postives = 72/138 (52.17%), Query Frame = 3
Query:    9 LPHFHISTASSKRHSGCTLQLHY*FLMNRPRSAPIGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERFREMAGKSDKYM---LLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEWVRTGGDELVDMSEGTGLTM 413
            LP+       + RHS     L +    +  R   + GF +P+G  + VN W I +D ++W++PS F PERF    G  +K +   ++ FG G+R C GE +A   V L L  L+Q  E+  T G + VDM+   GLTM
Sbjct:  369 LPYLEAFILETFRHSSF---LPFTIPHSTTRDTSLNGFYIPKGRCVFVNQWQINHDQKLWDDPSAFWPERFLTADGTINKALSEKVILFGLGKRKCIGETIARWEVFLFLAILLQQVEFRVTPGVK-VDMTPVYGLTM 502          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: CP17A_SHEEP (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ovis aries GN=CYP17A1 PE=2 SV=2)

HSP 1 Score: 61.6178 bits (148), Expect = 2.129e-13
Identity = 32/83 (38.55%), Postives = 47/83 (56.63%), Query Frame = 3
Query:  111 IGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERFREMAGK---SDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCF 350
            IG   + +GT ++VN WA+ ++ + W++P  F PERF +  G    S     LPFG G R C GE LA + + L +  L+Q F
Sbjct:  381 IGDLTIDKGTDVVVNLWALHHNEKEWQQPDLFMPERFLDPTGTQLISPSLSYLPFGAGPRSCVGEMLARQELFLFMSRLLQRF 463          

HSP 2 Score: 33.4982 bits (75), Expect = 2.129e-13
Identity = 14/31 (45.16%), Postives = 20/31 (64.52%), Query Frame = 2
Query:    2 SDLTALPYLHGVIKETLRMYPAAPLLVPHES 94
            SD   L  L   I+E LR+ P AP+L+PH++
Sbjct:  345 SDRNRLVLLEATIREVLRIRPVAPMLIPHKA 375          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: CP1A1_OPSTA (Cytochrome P450 1A1 OS=Opsanus tau GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.764e-13
Identity = 39/111 (35.14%), Postives = 61/111 (54.95%), Query Frame = 3
Query:   99 RSAPIGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERFREMAG------KSDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEWVRTGGDELVDMSEGTGLTM 413
            ++  + G+ +P+ T + +N W I +DP +W++P  F PERF    G      + +K ML  FG G+R C GE +A   V L L  ++Q  ++    G+ L DM+   GLTM
Sbjct:  397 KNTSLNGYFIPKDTCVFINQWQINHDPELWKDPFSFNPERFLSADGTELNRLEGEKVML--FGLGKRRCIGEVIARNEVFLFLAIIIQRLQFHMLPGEPL-DMTPEYGLTM 504          

HSP 2 Score: 24.2534 bits (51), Expect = 2.764e-13
Identity = 11/29 (37.93%), Postives = 14/29 (48.28%), Query Frame = 2
Query:    2 SDLTALPYLHGVIKETLRMYPAAPLLVPH 88
            SD  +LP+L   I E  R     P  +PH
Sbjct:  365 SDRPSLPFLDAFILEIFRHSSFLPFTIPH 393          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: CP3A1_RAT (Cytochrome P450 3A1 OS=Rattus norvegicus GN=Cyp3a1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.766e-13
Identity = 34/87 (39.08%), Postives = 54/87 (62.07%), Query Frame = 3
Query:   99 RSAPIGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERF-REMAGKSDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEW 356
            +   I G  +P+G+++++ S+A+  DP+ W EP +F+PERF +E  G  D Y+ LPFG G R C G   A+  + LAL  ++Q F +
Sbjct:  380 KDVEINGVFMPKGSVVMIPSYALHRDPQHWPEPEEFRPERFSKENKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSF 466          

HSP 2 Score: 23.483 bits (49), Expect = 2.766e-13
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 2
Query:   17 LPYLHGVIKETLRMYP 64
            + YL  V+ ETLR+YP
Sbjct:  354 MEYLDMVLNETLRLYP 369          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: CP3AG_MOUSE (Cytochrome P450 3A16 OS=Mus musculus GN=Cyp3a16 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.766e-13
Identity = 33/87 (37.93%), Postives = 53/87 (60.92%), Query Frame = 3
Query:   99 RSAPIGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERF-REMAGKSDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEW 356
            +   I G  +P+G+ +++ S+ + +DP+ W EP +F+PERF +E  G  D Y+ LPFG G R C G   A+  + LAL  ++Q F +
Sbjct:  380 KDVEINGIYIPKGSTVIIPSYVLHHDPQHWPEPEEFQPERFSKENKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALIKVLQNFSF 466          

HSP 2 Score: 25.0238 bits (53), Expect = 2.766e-13
Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 2
Query:   14 ALPYLHGVIKETLRMYP 64
            A+ YL  V+ ETLR+YP
Sbjct:  353 AMEYLDMVLNETLRLYP 369          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: CP3AJ_CAPAE (Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus GN=CYP3A19 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.841e-13
Identity = 36/107 (33.64%), Postives = 58/107 (54.21%), Query Frame = 3
Query:   99 RSAPIGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERF-REMAGKSDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEWVRTGGDELVDMSEGTGLTMP 416
            +   I G  +P+GT ++V  + + N+P  W EP +F+PERF ++     + Y+ LPFGTG R C G   A+  + LAL  ++Q F ++     ++       GLT P
Sbjct:   90 KDVEIHGVSIPKGTTVMVPLFVLHNNPEFWPEPEEFRPERFSKKNKDGINPYVYLPFGTGPRNCVGMRFALMNIKLALVRILQNFSFIPCKETQIPLKLYTQGLTQP 196          

HSP 2 Score: 25.7942 bits (55), Expect = 2.841e-13
Identity = 11/21 (52.38%), Postives = 14/21 (66.67%), Query Frame = 2
Query:    8 LTALPYLHGVIKETLRMYPAA 70
            L  + YL  V+ ETLRM+P A
Sbjct:   61 LVQMEYLDMVVNETLRMFPIA 81          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: CP1A1_ORYLA (Cytochrome P450 1A1 OS=Oryzias latipes GN=cyp1a1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.567e-13
Identity = 40/111 (36.04%), Postives = 62/111 (55.86%), Query Frame = 3
Query:   99 RSAPIGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERFREMAG----KSDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQ--CFEWVRTGGDELVDMSEGTGLTM 413
            R   + G+ +P+ T + +N W I +DP++W++PS F P+RF    G    + D   ++ FG G+R C GE +A   V L L  ++Q  CFE +     E +DM+   GLTM
Sbjct:  397 RDTSLNGYYIPKDTCVFINQWQINHDPKLWQDPSSFNPDRFLSEDGSEVNRLDGEKVMVFGLGKRRCIGEVIARNEVFLFLAIMIQKLCFEEM---PGEPLDMTPEYGLTM 504          
The following BLAST results are available for this feature:
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 262
Match NameE-valueIdentityDescription
C71AG_ARATH1.601e-1337.61Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
CP17A_CAPHI1.639e-1338.55Steroid 17-alpha-hydroxylase/17,20 lyase OS=Capra ... [more]
CP2D4_RAT1.640e-1336.70Cytochrome P450 2D4 OS=Rattus norvegicus GN=Cyp2d4... [more]
CP1A1_BALAC2.091e-1335.51Cytochrome P450 1A1 OS=Balaenoptera acutorostrata ... [more]
CP17A_SHEEP2.129e-1338.55Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ovis a... [more]
CP1A1_OPSTA2.764e-1335.14Cytochrome P450 1A1 OS=Opsanus tau GN=cyp1a1 PE=2 ... [more]
CP3A1_RAT2.766e-1339.08Cytochrome P450 3A1 OS=Rattus norvegicus GN=Cyp3a1... [more]
CP3AG_MOUSE2.766e-1337.93Cytochrome P450 3A16 OS=Mus musculus GN=Cyp3a16 PE... [more]
CP3AJ_CAPAE2.841e-1333.64Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus ... [more]
CP1A1_ORYLA3.567e-1336.04Cytochrome P450 1A1 OS=Oryzias latipes GN=cyp1a1 P... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00735 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00735 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623644 ID=BQ623644; Name=BQ623644; organism=Citrus sinensis; type=EST; length=421bp
GTCTGATCTTACCGCACTTCCATATCTCCACGGCGTCATCAAAGAGACAC
TCAGGATGTACCCTGCAGCTCCACTACTAGTTCCTCATGAATCGTCCGAG
GAGTGCACCTATAGGAGGTTTCAAAGTTCCACGTGGCACAATGTTGTTGG
TGAACTCGTGGGCCATACAAAATGATCCTAGAATATGGGAAGAGCCCTCA
AAATTCAAGCCAGAGAGGTTCCGGGAAATGGCAGGGAAAAGTGATAAGTA
TATGCTTTTGCCATTTGGGACAGGGAGGAGAGTGTGTCCTGGAGAAGGCT
TGGCGATGAGGTTGGTTGGGTTGGCATTAGGTTCGTTGGTTCAGTGCTTT
GAGTGGGTGAGAACAGGTGGTGATGAGTTGGTGGACATGAGCGAAGGCAC
TGGGCTTACCATGCCTAGATC
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