BQ623644

Overview
NameBQ623644
Unique NameBQ623644
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length421
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.366e-23
Identity = 43/104 (41.35%), Postives = 64/104 (61.54%), Query Frame = 3
Query:  105 APIGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERFREMAGK----SDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEWVRTGGDELVDMSEGTG 404
            A +GG+ +P  + +LVN+W + N+P  W++P +F+PERF E   K     + +  LPFG GRR CPG  LA+ ++G+ +G LVQ FE +   G   +D SE  G
Sbjct:  383 AKLGGYDIPAESKILVNAWFLANNPEHWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGKSKIDTSEKGG 486          

HSP 2 Score: 36.965 bits (84), Expect = 7.366e-23
Identity = 17/28 (60.71%), Postives = 19/28 (67.86%), Query Frame = 2
Query:    5 DLTALPYLHGVIKETLRMYPAAPLLVPH 88
            D   LPYL  VIKETLR+  A PL +PH
Sbjct:  350 DTYKLPYLQAVIKETLRLRMAIPLFLPH 377          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.584e-23
Identity = 40/104 (38.46%), Postives = 63/104 (60.58%), Query Frame = 3
Query:  105 APIGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERFRE----MAGKSDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEWVRTGGDELVDMSEGTG 404
            A + G+ +P  + +LVN+W + N+P  W++P +F+PERF E    +    + +  +PFG GRR CPG  LA+ ++G+ +G +VQ FE +   G   VD SE  G
Sbjct:  383 AKLAGYDIPAESKILVNAWWLANNPNSWKKPEEFRPERFFEEESHVEANGNDFRYVPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKVDTSEKGG 486          

HSP 2 Score: 41.2022 bits (95), Expect = 9.584e-23
Identity = 19/28 (67.86%), Postives = 21/28 (75.00%), Query Frame = 2
Query:    5 DLTALPYLHGVIKETLRMYPAAPLLVPH 88
            DL  LPYL  V+KETLR+  A PLLVPH
Sbjct:  350 DLHKLPYLQAVVKETLRLRMAIPLLVPH 377          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.590e-23
Identity = 41/97 (42.27%), Postives = 62/97 (63.92%), Query Frame = 3
Query:  117 GFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERF--REMAGKSDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEWVRTGG--DELVDMSE 395
            G+ +P+G  + VN+ AI  DP+ W++P KF+PERF   ++     ++  +PFG+GRR+CPG  LA+R++ L L SLV  F W    G  +E +DM E
Sbjct:  371 GYTIPKGMDVHVNAHAIGRDPKDWKDPLKFQPERFLDSDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLDMEE 467          

HSP 2 Score: 41.2022 bits (95), Expect = 9.590e-23
Identity = 15/35 (42.86%), Postives = 22/35 (62.86%), Query Frame = 2
Query:    2 SDLTALPYLHGVIKETLRMYPAAPLLVPHESSEEC 106
            S  + LPYL   +KET+R+YP   +++PH   E C
Sbjct:  333 SHFSELPYLQACVKETMRLYPPISIMIPHRCMETC 367          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.246e-22
Identity = 45/117 (38.46%), Postives = 66/117 (56.41%), Query Frame = 3
Query:  111 IGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERFRE--------MAGKSDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEW------VRTGGDELVDMSEGTGLTMPR 419
            I G+ +P GT ++VN+WA+  DP  W++  +F PERF E        M GK  ++  +PFG GRR+C G   A+  V + L +L+  F+W       RTG    VDMS+  G+T+ R
Sbjct:  406 INGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRF--VPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMERTGAK--VDMSDQFGMTLRR 518          

HSP 2 Score: 44.669 bits (104), Expect = 1.246e-22
Identity = 17/34 (50.00%), Postives = 26/34 (76.47%), Query Frame = 2
Query:    5 DLTALPYLHGVIKETLRMYPAAPLLVPHESSEEC 106
            DL+ +PYL   IKE++R++P AP L+PH S+ +C
Sbjct:  371 DLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDC 404          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.246e-22
Identity = 44/113 (38.94%), Postives = 62/113 (54.87%), Query Frame = 3
Query:  111 IGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERF-REMAGKSDKY-----MLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEW----VRTGGDELVDMSEGTGLTMPR 419
            I G+ +P    +LVN WAI  DP +WE+P +F PERF R+   KS+ Y       LPFG+GRR+CPG    +  + + L +L+  F+W     +  G   V M E  GL + R
Sbjct:  411 IDGYHIPANPRVLVNGWAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFGLATMEIMLANLMYHFDWEVPNEKEDGCWKVSMDEKFGLMLRR 523          

HSP 2 Score: 45.0542 bits (105), Expect = 1.246e-22
Identity = 18/34 (52.94%), Postives = 26/34 (76.47%), Query Frame = 2
Query:    5 DLTALPYLHGVIKETLRMYPAAPLLVPHESSEEC 106
            DL++LPYL   +KE LR++P  PLL+PH S+ +C
Sbjct:  376 DLSSLPYLKASMKEALRLHPPGPLLLPHYSTADC 409          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: THAD_ARATH (Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=CYP705A5 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.110e-22
Identity = 47/108 (43.52%), Postives = 63/108 (58.33%), Query Frame = 3
Query:  111 IGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERF-------REMAGKSDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEWVRTGGDELVDMSEGTGLTM 413
            I GF +P  T L VN +AI  DP  WE+P +FKPERF        E   + D    +PFG+GRR CPG  LA  +VG  +G +VQ F+W+  G  E ++M EG  +T+
Sbjct:  389 IKGFYIPEKTRLFVNVYAIMRDPDFWEDPEEFKPERFLASSRLGEEDEKREDMLKYIPFGSGRRACPGSHLAYTVVGSVIGMMVQHFDWIIKG--EKINMKEGGTMTL 494          

HSP 2 Score: 32.7278 bits (73), Expect = 2.110e-22
Identity = 16/40 (40.00%), Postives = 22/40 (55.00%), Query Frame = 2
Query:    2 SDLTALPYLHGVIKETLRMYPAAPLLVPHESSEECTYRRF 121
            +DL  LPYL  ++KE LR++P  P  V     E C  + F
Sbjct:  355 TDLPNLPYLQAIVKEGLRLHPPGP--VVRTFKETCEIKGF 392          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.111e-22
Identity = 40/102 (39.22%), Postives = 61/102 (59.80%), Query Frame = 3
Query:  111 IGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERFRE----MAGKSDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEWVRTGGDELVDMSEGTG 404
            + GF +P  + +LVN+W + N+P  W++P +F+PERF E    +    + +  LPFG GRR CPG  LA+ ++G+ +G LVQ  E +   G   +D SE  G
Sbjct:  386 LNGFDIPAESKILVNAWWLPNNPAHWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNVELLPPPGQSKIDTSEKGG 487          

HSP 2 Score: 41.5874 bits (96), Expect = 2.111e-22
Identity = 20/28 (71.43%), Postives = 21/28 (75.00%), Query Frame = 2
Query:    5 DLTALPYLHGVIKETLRMYPAAPLLVPH 88
            DL  LPYL  VIKETLR+  A PLLVPH
Sbjct:  351 DLHKLPYLQAVIKETLRLRMAIPLLVPH 378          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.746e-22
Identity = 41/110 (37.27%), Postives = 64/110 (58.18%), Query Frame = 3
Query:  111 IGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERFREMAGKSDK-------YMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEWVRTGGDELVDMSEGTGLTMPR 419
            + G+ +P+ T L VN WAI  DP++WE P +F PERF  ++G++ K       + L+PFG GRR+C G  + + +V   LG+LV  F+W        ++M E  GL + +
Sbjct:  380 VDGYYIPKNTRLSVNIWAIGRDPQVWENPLEFNPERF--LSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPSEVIELNMEEAFGLALQK 487          

HSP 2 Score: 40.4318 bits (93), Expect = 2.746e-22
Identity = 17/35 (48.57%), Postives = 23/35 (65.71%), Query Frame = 2
Query:    2 SDLTALPYLHGVIKETLRMYPAAPLLVPHESSEEC 106
            SD+  LPYL  + KET R +P+ PL +P  S+E C
Sbjct:  344 SDIPNLPYLRAICKETFRKHPSTPLNLPRISNEPC 378          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.573e-22
Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = 3
Query:  105 APIGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERFREMAGK----SDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEWVRTGGDELVDMSEGTG 404
            A + G+ +P  + +LVN+W + N+P  W +P +F+PERF E   K     + +  +PFG GRR CPG  LA+ ++G+ +G LVQ FE +   G   +D +E  G
Sbjct:  384 AKLAGYDIPAESKILVNAWWLANNPAHWNKPDEFRPERFLEEESKVEANGNDFKYIPFGVGRRSCPGIILALPILGIVIGRLVQNFELLPPPGQSKIDTAEKGG 487          

HSP 2 Score: 39.6614 bits (91), Expect = 3.573e-22
Identity = 19/28 (67.86%), Postives = 20/28 (71.43%), Query Frame = 2
Query:    5 DLTALPYLHGVIKETLRMYPAAPLLVPH 88
            D+  LPYL  VIKETLR   A PLLVPH
Sbjct:  351 DVQKLPYLQAVIKETLRYRMAIPLLVPH 378          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: C75AK_ARATH (Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=CYP705A20 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 6.046e-22
Identity = 43/105 (40.95%), Postives = 60/105 (57.14%), Query Frame = 3
Query:   99 RSAPIGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERFREMAGKSDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEWVRTGGDELVDMSEGTGLTM 413
            RS  + GF +   T L+VN++A+  DP  WE+P +FKPERF     +      + FG+GRR CPG  LA   +G A+G++VQCF+    G    +D   G  LTM
Sbjct:  382 RSCEMKGFYIAEKTTLVVNAYAVMRDPTTWEDPDEFKPERFLRQEEERRALKHIAFGSGRRGCPGSNLATIFIGTAIGTMVQCFDLSIKGDKVKMDEVGGLNLTM 486          

HSP 2 Score: 35.4242 bits (80), Expect = 6.046e-22
Identity = 15/26 (57.69%), Postives = 19/26 (73.08%), Query Frame = 2
Query:    5 DLTALPYLHGVIKETLRMYPAAPLLV 82
            DL  LPYL  V+KE LR++P  PL+V
Sbjct:  352 DLPKLPYLQSVVKEGLRLHPPLPLMV 377          
The following BLAST results are available for this feature:
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 262
Match NameE-valueIdentityDescription
TCMO_CATRO7.366e-2341.35Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
TCMO_ARATH9.584e-2338.46Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
C80A1_BERST9.590e-2342.27Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C71C1_MAIZE1.246e-2238.46Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C71C3_MAIZE1.246e-2238.94Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
THAD_ARATH2.110e-2243.52Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=C... [more]
TCMO_MEDSA2.111e-2239.22Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]
C75A1_PETHY2.746e-2237.27Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]
TCMO_PETCR3.573e-2238.46Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
C75AK_ARATH6.046e-2240.95Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00735 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00735 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623644 ID=BQ623644; Name=BQ623644; organism=Citrus sinensis; type=EST; length=421bp
GTCTGATCTTACCGCACTTCCATATCTCCACGGCGTCATCAAAGAGACAC
TCAGGATGTACCCTGCAGCTCCACTACTAGTTCCTCATGAATCGTCCGAG
GAGTGCACCTATAGGAGGTTTCAAAGTTCCACGTGGCACAATGTTGTTGG
TGAACTCGTGGGCCATACAAAATGATCCTAGAATATGGGAAGAGCCCTCA
AAATTCAAGCCAGAGAGGTTCCGGGAAATGGCAGGGAAAAGTGATAAGTA
TATGCTTTTGCCATTTGGGACAGGGAGGAGAGTGTGTCCTGGAGAAGGCT
TGGCGATGAGGTTGGTTGGGTTGGCATTAGGTTCGTTGGTTCAGTGCTTT
GAGTGGGTGAGAACAGGTGGTGATGAGTTGGTGGACATGAGCGAAGGCAC
TGGGCTTACCATGCCTAGATC
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