BQ623644

Overview
NameBQ623644
Unique NameBQ623644
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length421
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 6.046e-22
Identity = 46/109 (42.20%), Postives = 63/109 (57.80%), Query Frame = 3
Query:   99 RSAPIGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERFREMA--GKSDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEWVRTGG--DELVDMSEGTGLTM 413
            R   + G+ V  GT +L+N WAI  D  +WEE   F PERF E +   +   + L+PFG+GRR CPG   A  +  LAL +LV  F++    G   E +DMSEG+G T+
Sbjct:  386 RDTKVLGYDVASGTRVLINCWAIGRDSSVWEESETFLPERFLETSIDYRGMHFELIPFGSGRRGCPGATFAAAIDELALATLVHKFDFKLPNGVRVEDLDMSEGSGFTI 494          

HSP 2 Score: 41.5874 bits (96), Expect = 6.046e-22
Identity = 18/34 (52.94%), Postives = 25/34 (73.53%), Query Frame = 2
Query:    2 SDLTALPYLHGVIKETLRMYPAAPLLVPHESSEE 103
            SDL  +PYL  V+KE+LR++   PLLVP ES+ +
Sbjct:  354 SDLEKMPYLKAVMKESLRLHAPVPLLVPRESTRD 387          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 6.047e-22
Identity = 41/110 (37.27%), Postives = 63/110 (57.27%), Query Frame = 3
Query:  111 IGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERFREMAGKSDK-------YMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEWVRTGGDELVDMSEGTGLTMPR 419
            + G+ +P+ T L VN WAI  DP +WE P +F PERF  ++G++ K       + L+PFG GRR+C G  + + +V   LG+LV  F+W        ++M E  GL + +
Sbjct:  380 VDGYYIPKNTRLSVNIWAIGRDPEVWENPLEFYPERF--LSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPSEVIELNMEEAFGLALQK 487          

HSP 2 Score: 40.4318 bits (93), Expect = 6.047e-22
Identity = 17/35 (48.57%), Postives = 23/35 (65.71%), Query Frame = 2
Query:    2 SDLTALPYLHGVIKETLRMYPAAPLLVPHESSEEC 106
            SD+  LPYL  + KET R +P+ PL +P  S+E C
Sbjct:  344 SDIPNLPYLRAICKETFRKHPSTPLNLPRISNEPC 378          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.047e-22
Identity = 39/104 (37.50%), Postives = 62/104 (59.62%), Query Frame = 3
Query:  105 APIGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERFRE----MAGKSDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEWVRTGGDELVDMSEGTG 404
            A + G+ +P  + +LVN+W + N+P  W++P  F+PERF E    +    + +  +PFG GRR CPG  LA+ ++G+ +G +VQ FE +   G   +D SE  G
Sbjct:  383 AKLAGYDIPAESKILVNAWWLANNPAHWKDPQVFRPERFLEEESGVEANGNDFRYIPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKIDTSEKGG 486          

HSP 2 Score: 39.6614 bits (91), Expect = 6.047e-22
Identity = 19/28 (67.86%), Postives = 20/28 (71.43%), Query Frame = 2
Query:    5 DLTALPYLHGVIKETLRMYPAAPLLVPH 88
            D   LPYL  VIKETLR+  A PLLVPH
Sbjct:  350 DTHKLPYLQAVIKETLRLRMAIPLLVPH 377          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.331e-21
Identity = 39/107 (36.45%), Postives = 62/107 (57.94%), Query Frame = 3
Query:  111 IGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERF--REMAGKSDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEWVRTG--GDELVDMSEGTGLTMPR 419
            I G+++P  T +++N+WAI  +P+ W E   FKPERF    +  +   +  +PFG GRR+CPG   A+  + L L  L+  F+W       +E +DM+E  G+T+ R
Sbjct:  391 INGYEIPSKTRIIINAWAIGRNPKYWGETESFKPERFLNSSIDFRGTDFEFIPFGAGRRICPGITFAIPNIELPLAQLLYHFDWKLPNKMKNEELDMTESNGITLRR 497          

HSP 2 Score: 41.5874 bits (96), Expect = 1.331e-21
Identity = 18/41 (43.90%), Postives = 26/41 (63.41%), Query Frame = 2
Query:    2 SDLTALPYLHGVIKETLRMYPAAPLLVPHESSEECTYRRFQ 124
            ++L  L YL  +IKET+R++P  PLLVP  S E C    ++
Sbjct:  355 TELHQLIYLKSIIKETMRLHPPVPLLVPRVSRERCQINGYE 395          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.331e-21
Identity = 46/107 (42.99%), Postives = 62/107 (57.94%), Query Frame = 3
Query:  111 IGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERF--REMAGKSDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEWVRTGG--DELVDMSEGTGLTMPR 419
            +G + +P  T  L+N WAI  DP  WE P +F PERF   ++  K  K+ LLPFG+GRR CPG   A+ ++ LAL  LV  F +    G   E +DM+E TG+   R
Sbjct:  388 LGYYHIPARTQALINVWAIGRDPLSWENPEEFCPERFLNNDIDMKGLKFELLPFGSGRRGCPGSSFAIAVIELALARLVHKFNFALPKGTKPEDLDMTECTGIATRR 494          

HSP 2 Score: 38.5058 bits (88), Expect = 1.331e-21
Identity = 18/33 (54.55%), Postives = 23/33 (69.70%), Query Frame = 2
Query:    5 DLTALPYLHGVIKETLRMYPAAPLLVPHESSEE 103
            DL  + YL  VIKE+LR++P   LLVP ES E+
Sbjct:  352 DLKNMQYLRAVIKESLRLHPPNSLLVPRESMED 384          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.253e-21
Identity = 40/105 (38.10%), Postives = 63/105 (60.00%), Query Frame = 3
Query:  111 IGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERFRE--MAGKSDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEWVRTGG--DELVDMSEGTGLTM 413
            + G+ +P    +LVN+WAI  DP++W +P +FKPERF +  +  +   + LLPFG+GRR+CPG  + M  + L L +L+  F+W    G   + +D  E   LT+
Sbjct:  384 VQGYDIPPKRRILVNAWAIGRDPKLWTDPEEFKPERFIDSPVDYRGQHFELLPFGSGRRICPGMAMGMATLELGLLNLLYFFDWKLPDGMSHKDIDTEEAGTLTV 488          

HSP 2 Score: 40.0466 bits (92), Expect = 2.253e-21
Identity = 17/30 (56.67%), Postives = 24/30 (80.00%), Query Frame = 2
Query:    5 DLTALPYLHGVIKETLRMYPAAPLLVPHES 94
            DL  +P+L+ VIKET R++P APLL+P E+
Sbjct:  349 DLDKVPFLNLVIKETFRLHPVAPLLLPRET 378          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.725e-21
Identity = 57/128 (44.53%), Postives = 76/128 (59.38%), Query Frame = 3
Query:   60 TLQLHY*FLMNRPRSAP----IGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERF--REMAGKSDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEWVRTGG--DELVDMSEGTGLTMPR 419
            T +LH    +  PR A     + GF VP+ T +LVN WAI  DP +WE PS+F+PERF  +++  K   Y L PFG GRR+CPG  LA++ V L L SL+  F+W    G   E +DM E  G+T+ R
Sbjct:  369 TFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVLVNVWAIGRDPSVWENPSQFEPERFMGKDIDVKGRDYELTPFGGGRRICPGLPLAVKTVSLMLASLLYSFDWKLPNGVVSEDLDMDETFGITLHR 496          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.926e-21
Identity = 43/99 (43.43%), Postives = 58/99 (58.59%), Query Frame = 3
Query:  117 GFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERF------REMAGKSDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEWVRTGGDELVDMSE 395
            G  VP GT  +VN W+I +DP IWE P +F+PERF       E+  + +   L PFG GRRVCPG+ L +  V L +  L+  FEW+    +  VD+SE
Sbjct:  429 GMCVPAGTTAMVNMWSITHDPNIWESPYEFRPERFVVFEGGEEVDVRGNDLRLAPFGAGRRVCPGKALGLATVNLWVAKLLHHFEWL-PHAEHPVDLSE 526          

HSP 2 Score: 36.965 bits (84), Expect = 2.926e-21
Identity = 15/26 (57.69%), Postives = 19/26 (73.08%), Query Frame = 2
Query:    2 SDLTALPYLHGVIKETLRMYPAAPLL 79
            SD+  LPY+  V+KE LRM+P  PLL
Sbjct:  389 SDIPKLPYIQAVVKEALRMHPPGPLL 414          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 3.813e-21
Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 3
Query:  111 IGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERF--REMAGKSDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEW 356
            + G+ +P    +LVN+WAI  DP +W  P +F PERF    +  +   + LLPFG+GRR+CPG GL + +V L L +L+  F+W
Sbjct:  384 VQGYDIPPKRRILVNTWAIGRDPTLWINPEEFNPERFINNPVDYRGQHFELLPFGSGRRICPGMGLGITIVELGLLNLLYFFDW 467          

HSP 2 Score: 40.817 bits (94), Expect = 3.813e-21
Identity = 17/30 (56.67%), Postives = 24/30 (80.00%), Query Frame = 2
Query:    5 DLTALPYLHGVIKETLRMYPAAPLLVPHES 94
            DL  +P+L+ VIKET R++P APLL+P E+
Sbjct:  349 DLNKVPFLNMVIKETFRLHPVAPLLLPRET 378          
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 4.955e-21
Identity = 42/111 (37.84%), Postives = 57/111 (51.35%), Query Frame = 3
Query:   99 RSAPIGGFKVPRGTMLLVNSWAIQNDPRIWEEPSKFKPERF--REMAGKSDKYMLLPFGTGRRVCPGEGLAMRLVGLALGSLVQCFEWVRTGG--DELVDMSEGTGLTMPR 419
            R   I G+ VP  T + VN+WAI  DP  W  P +F P+RF   ++      + L+PFG GRR+CPG  +    V   L +L+ C++W   G    E V M E   LT  R
Sbjct:  404 RDTTICGYDVPANTRVFVNAWAIGRDPASWPAPDEFNPDRFVGSDVDYYGSHFELIPFGAGRRICPGLTMGETNVTFTLANLLYCYDWALPGAMKPEDVSMEETGALTFHR 514          

HSP 2 Score: 40.817 bits (94), Expect = 4.955e-21
Identity = 18/35 (51.43%), Postives = 24/35 (68.57%), Query Frame = 2
Query:    5 DLTALPYLHGVIKETLRMYPAAPLLVPHESSEECT 109
            D   +PYL  V+KETLR++P A LLVP E+  + T
Sbjct:  373 DAAKIPYLKMVVKETLRLHPPATLLVPRETMRDTT 407          
The following BLAST results are available for this feature:
BLAST of BQ623644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 262
Match NameE-valueIdentityDescription
C71A6_NEPRA6.046e-2242.20Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C75A3_PETHY6.047e-2237.27Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
TCMO_RUTGR6.047e-2237.50Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
C71DA_SOYBN1.331e-2136.45Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71A4_SOLME1.331e-2142.99Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C71BH_ARATH2.253e-2138.10Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C76C4_ARATH2.725e-2144.53Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C78A4_PINRA2.926e-2143.43Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C71BG_ARATH3.813e-2142.86Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C71E1_SORBI4.955e-2137.844-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00735 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00735 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623644 ID=BQ623644; Name=BQ623644; organism=Citrus sinensis; type=EST; length=421bp
GTCTGATCTTACCGCACTTCCATATCTCCACGGCGTCATCAAAGAGACAC
TCAGGATGTACCCTGCAGCTCCACTACTAGTTCCTCATGAATCGTCCGAG
GAGTGCACCTATAGGAGGTTTCAAAGTTCCACGTGGCACAATGTTGTTGG
TGAACTCGTGGGCCATACAAAATGATCCTAGAATATGGGAAGAGCCCTCA
AAATTCAAGCCAGAGAGGTTCCGGGAAATGGCAGGGAAAAGTGATAAGTA
TATGCTTTTGCCATTTGGGACAGGGAGGAGAGTGTGTCCTGGAGAAGGCT
TGGCGATGAGGTTGGTTGGGTTGGCATTAGGTTCGTTGGTTCAGTGCTTT
GAGTGGGTGAGAACAGGTGGTGATGAGTTGGTGGACATGAGCGAAGGCAC
TGGGCTTACCATGCCTAGATC
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