BQ623646

Overview
NameBQ623646
Unique NameBQ623646
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_BRUME (Flavoprotein wrbA OS=Brucella melitensis GN=wrbA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.649e-22
Identity = 40/105 (38.10%), Postives = 52/105 (49.52%), Query Frame = 1
Query:   52 LPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTF 366
            +PEEV          + PI TP ELA+ D  + G  TR+GMMA+Q K FLD TGGLW    L  K   +               ++   Q+ HHGMI VP+ Y +
Sbjct:   42 VPEEVAKASHYKIDQEAPIATPGELADYDAIIIGTATRYGMMASQMKNFLDQTGGLWAKGALINKVGSVMVSTATQHGGAELALISTQWQMQHHGMIIVPLSYAY 146          

HSP 2 Score: 46.2098 bits (108), Expect = 3.649e-22
Identity = 24/44 (54.55%), Postives = 30/44 (68.18%), Query Frame = 2
Query:  398 KGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 526
            +GG+PYG  T A GDGSRQP+  EL+ A  QG+ +A I  KL G
Sbjct:  156 RGGAPYGMTTTADGDGSRQPSAQELDGARFQGRRVAEITAKLHG 199          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_BRUC2 (Flavoprotein wrbA OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=wrbA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.649e-22
Identity = 40/105 (38.10%), Postives = 52/105 (49.52%), Query Frame = 1
Query:   52 LPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTF 366
            +PEEV          + PI TP ELA+ D  + G  TR+GMMA+Q K FLD TGGLW    L  K   +               ++   Q+ HHGMI VP+ Y +
Sbjct:   42 VPEEVAKASHYKIDQEAPIATPGELADYDAIIIGTATRYGMMASQMKNFLDQTGGLWAKGALINKVGSVMVSTATQYGGAELALISTQWQMQHHGMIIVPLSYAY 146          

HSP 2 Score: 46.2098 bits (108), Expect = 3.649e-22
Identity = 24/44 (54.55%), Postives = 30/44 (68.18%), Query Frame = 2
Query:  398 KGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 526
            +GG+PYG  T A GDGSRQP+  EL+ A  QG+ +A I  KL G
Sbjct:  156 RGGAPYGMTTTADGDGSRQPSAQELDGARFQGRRVAEITAKLHG 199          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_XANP2 (Flavoprotein wrbA OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=wrbA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.649e-22
Identity = 45/117 (38.46%), Postives = 56/117 (47.86%), Query Frame = 1
Query:   52 LPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 402
            +PEEV            PI T  ELAE D  + G  TRFG MA+Q   FLD  GGLW    L GK  G F               + IT L+H GM+ V + Y +GA M  +++V G
Sbjct:   42 VPEEVAKSAHFKLDQKAPIATVAELAEYDAIIVGVGTRFGRMASQMANFLDQAGGLWARGALNGKVGGAFTSTATQHGGQEVTLFSIITNLMHFGMVIVGLDYGYGAQM-TLDEVTG 157          

HSP 2 Score: 49.2914 bits (116), Expect = 3.649e-22
Identity = 26/43 (60.47%), Postives = 31/43 (72.09%), Query Frame = 2
Query:  401 GGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKLKG 526
            GGSPYGA T  G DGSRQP+ +EL+ A +QG+ IA  A KL G
Sbjct:  157 GGSPYGATTITGGDGSRQPSAIELDGARYQGRKIAETAIKLHG 199          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_RHISN (Flavoprotein wrbA OS=Rhizobium sp. (strain NGR234) GN=wrbA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.649e-22
Identity = 38/125 (30.40%), Postives = 62/125 (49.60%), Query Frame = 1
Query:   40 SLRHLPEEVLGKMSAPPKSDV----PIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 402
            S++ +PE V  +++      +    P+ T  EL + D  +FG  TR+G +A+Q + F+D TG LW   +L GK    F              L  I  ++HHGM+ V + Y F  G   ++++KG
Sbjct:   34 SVKRVPELVSEEVAKASHYKIDQPAPVATVEELGDYDAIIFGAGTRYGTVASQLRNFIDQTGSLWAKGKLVGKVGSAFTSSATQHGGQESTILGLIPTMLHHGMVVVGLPYAF-QGQMGIDEIKG 157          

HSP 2 Score: 56.225 bits (134), Expect = 3.649e-22
Identity = 28/42 (66.67%), Postives = 32/42 (76.19%), Query Frame = 2
Query:  398 KGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKL 520
            KGGSPYGA T  G DGSRQP+E+EL+ A  QG H+A IA KL
Sbjct:  156 KGGSPYGASTITGGDGSRQPSEIELDAARFQGAHVARIAAKL 197          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_MESSB (Flavoprotein wrbA OS=Mesorhizobium sp. (strain BNC1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.748e-22
Identity = 43/105 (40.95%), Postives = 56/105 (53.33%), Query Frame = 1
Query:   52 LPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTF 366
            +PEEV  K     + +  I TP ELA+ DGF+FG  TR+GMM++Q K FLD TG LW   +L  KPA +                +    L HHGMI VP+ Y +
Sbjct:   42 VPEEVARKAHYKLEQEAQIATPLELADYDGFIFGVSTRYGMMSSQLKNFLDQTGPLWAAGKLVNKPATVMVSTATQHGGAEIALASTQLALQHHGMIIVPLSYAY 146          

HSP 2 Score: 40.4318 bits (93), Expect = 4.748e-22
Identity = 22/42 (52.38%), Postives = 27/42 (64.29%), Query Frame = 2
Query:  398 KGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKL 520
            +GG+PYG  T +  DGSR P+  ELE A  QGK +A I  KL
Sbjct:  156 RGGAPYGMTTTSDTDGSRMPSAQELEGARFQGKRLAEITAKL 197          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_AZOVD (Flavoprotein wrbA OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=wrbA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.848e-22
Identity = 45/107 (42.06%), Postives = 54/107 (50.47%), Query Frame = 1
Query:   52 LPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQ----LVHHGMIFVPIGY 360
            +PEEV  K  A      P   P ELA+ D  +FG PTRFG MA Q + FLD TGGLW +  L GK A +F             + T IT     L HHGM+ V + Y
Sbjct:   43 MPEEVARKAGAKLDQAAPPAEPKELADYDAILFGTPTRFGNMAGQMRNFLDQTGGLWVSGALVGKFASVF-----TSTGTGGGSETTITSFWHTLAHHGMVIVGLPY 144          

HSP 2 Score: 47.3654 bits (111), Expect = 5.848e-22
Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 2
Query:  398 KGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKLK 523
            +GGSPYGA T AG DGSR+P+E EL  A  QG H+A +  +++
Sbjct:  156 RGGSPYGAATIAGADGSRRPSEKELILASFQGAHVARLVVRMQ 198          

HSP 3 Score: 22.3274 bits (46), Expect = 5.848e-22
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 3
Query:    6 SVEGVEAKLWQVPETL 53
            SV GVE  L +VPET+
Sbjct:   28 SVPGVEVTLKRVPETM 43          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_BURCM (Flavoprotein wrbA OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=wrbA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.848e-22
Identity = 37/100 (37.00%), Postives = 50/100 (50.00%), Query Frame = 1
Query:  103 PIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 402
            P+ T +EL   D  +FG PTRFG MA Q + FLD TGGLW    L GK   +F               +  T L+H GM+ V + Y   +G+  M ++ G
Sbjct:   60 PVATVDELPNYDAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHQGMVIVGVPYAC-SGLVNMSEITG 158          

HSP 2 Score: 51.2174 bits (121), Expect = 5.848e-22
Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 2
Query:  401 GGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKL 520
            GG+PYGA T AG DGSRQP+  EL+ A +QGKH+A +A KL
Sbjct:  158 GGTPYGATTLAGADGSRQPSANELDIARYQGKHVAELAVKL 198          

HSP 3 Score: 22.3274 bits (46), Expect = 5.848e-22
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 3
Query:    6 SVEGVEAKLWQVPETL 53
            SV GVE  L +VPET+
Sbjct:   28 SVPGVEVTLKRVPETI 43          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_CHRSD (Flavoprotein wrbA OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=wrbA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.034e-22
Identity = 43/118 (36.44%), Postives = 60/118 (50.85%), Query Frame = 1
Query:   52 LPEEVLGKMSAPPKSDVPIIT-PNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 402
            +P+EV  K      +   ++  P+ LAE D  V G PTRFG MA+Q + F D TGGLW   +L GK  G F               +  T L+HHGM  V + Y+  A + E+++V G
Sbjct:   43 VPDEVAAKSGYKEDTTAAVLDDPSVLAEYDAIVVGTPTRFGNMASQMRNFWDKTGGLWAQGKLIGKLGGAFTSTASQHGGQETTLTSIHTTLLHHGMAVVGVPYSCPA-LTELDEVSG 159          

HSP 2 Score: 51.9878 bits (123), Expect = 8.034e-22
Identity = 28/43 (65.12%), Postives = 32/43 (74.42%), Query Frame = 2
Query:  401 GGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKLKG 526
            GG+PYGA T AG DGSRQP+E EL  A  QG+HIA +A KL G
Sbjct:  159 GGTPYGATTIAGGDGSRQPSENELTIARFQGQHIAEMAAKLAG 201          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_BRUMB (Flavoprotein wrbA OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=wrbA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.038e-22
Identity = 40/103 (38.83%), Postives = 51/103 (49.51%), Query Frame = 1
Query:   52 LPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGY 360
            +PEEV          + PI TP ELA+ D  + G  TR+GMMA+Q K FLD TGGLW    L  K   +               ++   Q+ HHGMI VP+ Y
Sbjct:   42 VPEEVAKASHYKIDQEAPIATPGELADYDAIIIGTATRYGMMASQMKNFLDQTGGLWAKGALINKVGSVMVSTATQHGGAELALISTQWQMQHHGMIIVPLSY 144          

HSP 2 Score: 46.2098 bits (108), Expect = 8.038e-22
Identity = 24/44 (54.55%), Postives = 30/44 (68.18%), Query Frame = 2
Query:  398 KGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 526
            +GG+PYG  T A GDGSRQP+  EL+ A  QG+ +A I  KL G
Sbjct:  156 RGGAPYGMTTTADGDGSRQPSAQELDGARFQGRRVAEITAKLHG 199          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_RHIL3 (Flavoprotein wrbA OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=wrbA PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.038e-22
Identity = 40/117 (34.19%), Postives = 54/117 (46.15%), Query Frame = 1
Query:   52 LPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 402
            +PE+V            PI T +ELA+ D  + G  TRFG +A+Q + F D TGGLW   +L GK   +F              L  I   +H GM+   + Y F  G    E+VKG
Sbjct:   42 VPEDVAKASYYKVDQAAPIATVDELADYDAIIVGAGTRFGTVASQMRNFWDQTGGLWFAGKLVGKLGSVFTSSATQHGGQESTILGFIPTFLHQGMVVAGLPYAF-QGQMGTEEVKG 157          

HSP 2 Score: 57.3806 bits (137), Expect = 8.038e-22
Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 2
Query:  398 KGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKL 520
            KGGSPYGA T   GDGSRQP+E+ELE A +QG H+A +A KL
Sbjct:  156 KGGSPYGASTITNGDGSRQPSEIELEGAKYQGAHVAKLAAKL 197          
The following BLAST results are available for this feature:
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_BRUME3.649e-2238.10Flavoprotein wrbA OS=Brucella melitensis GN=wrbA P... [more]
WRBA_BRUC23.649e-2238.10Flavoprotein wrbA OS=Brucella canis (strain ATCC 2... [more]
WRBA_XANP23.649e-2238.46Flavoprotein wrbA OS=Xanthobacter autotrophicus (s... [more]
WRBA_RHISN3.649e-2230.40Flavoprotein wrbA OS=Rhizobium sp. (strain NGR234)... [more]
WRBA_MESSB4.748e-2240.95Flavoprotein wrbA OS=Mesorhizobium sp. (strain BNC... [more]
WRBA_AZOVD5.848e-2242.06Flavoprotein wrbA OS=Azotobacter vinelandii (strai... [more]
WRBA_BURCM5.848e-2237.00Flavoprotein wrbA OS=Burkholderia ambifaria (strai... [more]
WRBA_CHRSD8.034e-2236.44Flavoprotein wrbA OS=Chromohalobacter salexigens (... [more]
WRBA_BRUMB8.038e-2238.83Flavoprotein wrbA OS=Brucella melitensis biotype 2... [more]
WRBA_RHIL38.038e-2234.19Flavoprotein wrbA OS=Rhizobium leguminosarum bv. v... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00737 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00737 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623646 ID=BQ623646; Name=BQ623646; organism=Citrus sinensis; type=EST; length=591bp
CTTCATCTGTTGAGGGTGTTGAAGCCAAATTATGGCAGGTCCCTGAGACA
CTTACCTGAGGAGGTACTTGGTAAGATGAGTGCACCACCAAAGAGTGATG
TACCTATTATTACCCCCAACGAACTTGCTGAGGCTGATGGGTTTGTTTTT
GGCTTCCCAACAAGATTTGGAATGATGGCTGCTCAATTTAAAGCATTTTT
AGATGCTACTGGTGGTCTATGGAGGACACAACAGCTCGCTGGCAAACCTG
CTGGGATGTTCTACAGCACTGGGTCACAAGGTGGTGGACAAGAGACTACA
GCGTTGACGGCAATTACTCAGCTTGTTCACCATGGGATGATATTTGTTCC
TATTGGATACACATTTGGTGCTGGCATGTTTGAGATGGAGAAAGTGAAAG
GGTGGAAGTCCCTACGGTGCAGGAACTTTTGCTGGAGATGGCTCGAGACA
GCCAACTGAGCTTGAGTTGGAGCAAGCTTTCCACCAGGGAAAACACATTG
CGGGCATTGCAAAGAAGCTGAAGGGAAGTGCTTAAATATTTCAATTTACA
ATACACCATTAGGTGGACTTATTCCATTCTTTTCGTCTCTA
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