BQ623646

Overview
NameBQ623646
Unique NameBQ623646
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: CLAH7_CLAHE (Minor allergen Cla h 7 OS=Cladosporium herbarum GN=CLAH7 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.359e-21
Identity = 49/105 (46.67%), Postives = 62/105 (59.05%), Query Frame = 1
Query:   52 LPEEVLGKMSAPPKSD-VPIIT-PNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGY 360
            L +EVL KM APPK D +P IT P  L + D F  G PTR+G   AQ++ F D TGG W+T    GK AG+F             AL A++ L HHG+I+VP+GY
Sbjct:   43 LTQEVLTKMHAPPKDDSIPEITDPFILEQYDRFPHGHPTRYGNFPAQWRTFWDRTGGQWQTGAFWGKYAGLFISTGTQGGGQESTALAAMSTLSHHGIIYVPLGY 147          

HSP 2 Score: 35.039 bits (79), Expect = 1.359e-21
Identity = 16/26 (61.54%), Postives = 22/26 (84.62%), Query Frame = 2
Query:  398 KGGSPYGAGTFAG-DGSRQPTELELE 472
            +G + +GAGTF+G DGSRQP++ ELE
Sbjct:  161 RGAAVWGAGTFSGGDGSRQPSQKELE 186          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_GEOLS (Flavoprotein wrbA OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=wrbA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.359e-21
Identity = 46/121 (38.02%), Postives = 61/121 (50.41%), Query Frame = 1
Query:   52 LPEEVLGKMSAPPK----SDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 402
            + EEVL K  A       + +P  T   LAEAD  +FG PTRFG MAAQ + FLD TG LW +  L GK   +F               +  + L+HHGMI V + YT    +  M+++ G
Sbjct:   43 ISEEVLEKYGAKAARAAFAHIPTATVERLAEADAIIFGTPTRFGNMAAQMRNFLDQTGKLWLSGGLVGKVGSVFASTATQHGGQETTITSFHSTLLHHGMIIVGVPYT-EQRLLTMDEISG 162          

HSP 2 Score: 46.9802 bits (110), Expect = 1.359e-21
Identity = 25/41 (60.98%), Postives = 29/41 (70.73%), Query Frame = 2
Query:  401 GGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKL 520
            GGSPYGA T AG DGSR+P+E EL  A  QG H+A I  +L
Sbjct:  162 GGSPYGATTLAGGDGSRRPSENELAIARFQGAHVAKITARL 202          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_METBF (Flavoprotein wrbA OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=wrbA PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.649e-21
Identity = 40/112 (35.71%), Postives = 52/112 (46.43%), Query Frame = 1
Query:   52 LPEEVLGKMSAPPKSD----VPIIT----PNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYT 363
            LP EVL KM A    +    +P++T     +  A AD  +FG PTR+G M AQ +   D  GGLW    L GK   +F              LT    L+H GMI V + Y+
Sbjct:   43 LPYEVLEKMGAIETKNLFAHIPVVTRSMYEDVFAGADALIFGTPTRYGNMTAQMRTVFDGLGGLWSRDALVGKVGSVFTSSGTQHGGQESTILTTHVTLLHLGMIIVGLPYS 154          

HSP 2 Score: 51.6026 bits (122), Expect = 1.649e-21
Identity = 26/43 (60.47%), Postives = 32/43 (74.42%), Query Frame = 2
Query:  401 GGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKLKG 526
            GGSPYGA T AG + +RQP+E EL  A +QG+H+  IAKKL G
Sbjct:  166 GGSPYGASTIAGAEENRQPSENELAMARYQGRHVTQIAKKLIG 208          

HSP 3 Score: 25.7942 bits (55), Expect = 1.649e-21
Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 3
Query:    9 VEGVEAKLWQVPETL 53
            VEG E +++QVPETL
Sbjct:   29 VEGAEVEIYQVPETL 43          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_PARDP (Flavoprotein wrbA OS=Paracoccus denitrificans (strain Pd 1222) GN=wrbA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.768e-21
Identity = 43/117 (36.75%), Postives = 58/117 (49.57%), Query Frame = 1
Query:   52 LPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 402
            +PE V  +         P+ T  ELA+ D  + G PTRFG MA+Q K FLD TGGLW   +L GK   +F               +  T L+H GMI V + Y+F  G   M+++ G
Sbjct:   42 VPEAVAERAGYKQDQRAPVATVGELADYDAIIIGTPTRFGNMASQMKNFLDQTGGLWAEDRLVGKVGSVFTSTGSQHGGQETTIQSTHTVLLHLGMIVVGLPYSF-KGQMRMDEITG 157          

HSP 2 Score: 45.0542 bits (105), Expect = 1.768e-21
Identity = 24/43 (55.81%), Postives = 28/43 (65.12%), Query Frame = 2
Query:  401 GGSPYGAGTFAGDGS---RQPTELELEQAFHQGKHIAGIAKKL 520
            GGSPYGA T A DG    RQP+  EL+ A  QG+H+A IA  L
Sbjct:  157 GGSPYGASTLADDGDGGDRQPSANELDGARFQGRHVAEIAAAL 199          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_OCHA4 (Flavoprotein wrbA OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=wrbA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.303e-21
Identity = 38/94 (40.43%), Postives = 47/94 (50.00%), Query Frame = 1
Query:   97 DVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGM 378
            D PI TP ELA+ D  + G  TR+GMMAAQ K FLD TGGLW    L  K   +               ++   Q+ H GMI VP+ Y +   M
Sbjct:   57 DAPIATPAELADYDAIIIGTATRYGMMAAQMKNFLDQTGGLWAKGALINKVGSVMVSTATQHGGAELALISTQWQMQHQGMIIVPLSYAYQGQM 150          

HSP 2 Score: 47.7506 bits (112), Expect = 2.303e-21
Identity = 25/42 (59.52%), Postives = 30/42 (71.43%), Query Frame = 2
Query:  398 KGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKL 520
            +GG+PYG  T A GDGSRQP+E EL+ A  QGK +A I  KL
Sbjct:  156 RGGAPYGMTTTADGDGSRQPSEQELDGARFQGKRVAEITAKL 197          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_ACIF5 (Flavoprotein wrbA OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=wrbA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.071e-21
Identity = 39/117 (33.33%), Postives = 56/117 (47.86%), Query Frame = 1
Query:   52 LPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 402
            +P E L  + A      P   P++LA  DG +FG PTRFG M  Q + FLD TG LW+  +L GK   +F               +  T L H GM+ V + Y+    +  M+++ G
Sbjct:   43 MPAETLAAVHAKTHQAAPEAHPDDLANYDGIIFGTPTRFGNMTGQMRNFLDRTGNLWQEGRLVGKVGSVFVSTATQHGGQETTLTSFHTFLFHQGMLVVGVPYSC-TELMNMDEISG 158          

HSP 2 Score: 49.2914 bits (116), Expect = 5.071e-21
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 2
Query:  401 GGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 526
            GG+PYGA T + GDGSRQP+  EL  A  QG+H+A I +KL G
Sbjct:  158 GGTPYGASTMSKGDGSRQPSANELTIARFQGRHVAEITRKLFG 200          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_ACIF2 (Flavoprotein wrbA OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=wrbA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.071e-21
Identity = 39/117 (33.33%), Postives = 56/117 (47.86%), Query Frame = 1
Query:   52 LPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 402
            +P E L  + A      P   P++LA  DG +FG PTRFG M  Q + FLD TG LW+  +L GK   +F               +  T L H GM+ V + Y+    +  M+++ G
Sbjct:   43 MPAETLAAVHAKTHQAAPEAHPDDLANYDGIIFGTPTRFGNMTGQMRNFLDRTGNLWQEGRLVGKVGSVFVSTATQHGGQETTLTSFHTFLFHQGMLVVGVPYSC-TELMNMDEISG 158          

HSP 2 Score: 49.2914 bits (116), Expect = 5.071e-21
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 2
Query:  401 GGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 526
            GG+PYGA T + GDGSRQP+  EL  A  QG+H+A I +KL G
Sbjct:  158 GGTPYGASTMSKGDGSRQPSANELTIARFQGRHVAEITRKLFG 200          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_BURA4 (Flavoprotein wrbA OS=Burkholderia ambifaria (strain MC40-6) GN=wrbA PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.058e-21
Identity = 36/100 (36.00%), Postives = 49/100 (49.00%), Query Frame = 1
Query:  103 PIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 402
            P+ T +EL   D  +FG PTRFG MA Q + FLD TG LW    L GK   +F               +  T L+H GM+ V + Y   +G+  M ++ G
Sbjct:   60 PVATVDELPNYDAIIFGTPTRFGNMAGQMRTFLDQTGCLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHQGMVIVGVPYAC-SGLVNMSEITG 158          

HSP 2 Score: 51.2174 bits (121), Expect = 6.058e-21
Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 2
Query:  401 GGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKL 520
            GG+PYGA T AG DGSRQP+  EL+ A +QGKH+A +A KL
Sbjct:  158 GGTPYGATTLAGADGSRQPSANELDIARYQGKHVAELAVKL 198          

HSP 3 Score: 22.3274 bits (46), Expect = 6.058e-21
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 3
Query:    6 SVEGVEAKLWQVPETL 53
            SV GVE  L +VPET+
Sbjct:   28 SVPGVEVTLKRVPETI 43          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_BRASO (Flavoprotein wrbA OS=Bradyrhizobium sp. (strain ORS278) GN=wrbA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.596e-21
Identity = 40/100 (40.00%), Postives = 49/100 (49.00%), Query Frame = 1
Query:  103 PIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 402
            PI    ELA+ D  + G  TRFG MA+Q   FLD  GGLW    L GK  G F               T IT L+H GM  V + Y F AG  ++++V G
Sbjct:   59 PIAKIEELADYDAIIVGTGTRFGRMASQMANFLDQAGGLWAKGALNGKVGGAFTSTATQHGGQETTLFTIITNLLHFGMTIVGLNYGF-AGQMKLDEVTG 157          

HSP 2 Score: 50.8322 bits (120), Expect = 6.596e-21
Identity = 28/43 (65.12%), Postives = 31/43 (72.09%), Query Frame = 2
Query:  401 GGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKLKG 526
            GGSPYGA T  G DGSRQP+E EL  A +QG+ IA  AKKL G
Sbjct:  157 GGSPYGATTITGGDGSRQPSENELAGARYQGRVIAETAKKLHG 199          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_CAUCR (Flavoprotein wrbA OS=Caulobacter crescentus GN=wrbA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.116e-20
Identity = 37/102 (36.27%), Postives = 50/102 (49.02%), Query Frame = 1
Query:   97 DVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 402
            D P+    +LA+ D  + G PTRFG MA+Q  AF DA GGLW    L GK AG F               + IT ++H G   V + Y   AG   ++++ G
Sbjct:   57 DAPVAKVEDLADYDAIIVGAPTRFGRMASQMAAFFDAAGGLWARGALHGKVAGAFTSTATQHGGQETTLFSIITNMLHFGTTIVGLDYGH-AGQMTLDEITG 157          

HSP 2 Score: 50.0618 bits (118), Expect = 1.116e-20
Identity = 28/43 (65.12%), Postives = 31/43 (72.09%), Query Frame = 2
Query:  401 GGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKLKG 526
            GGSPYGA T AG DGSRQP+E EL  A +QG+ IA  A KL G
Sbjct:  157 GGSPYGATTIAGGDGSRQPSENELTGARYQGRKIAETAIKLHG 199          
The following BLAST results are available for this feature:
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
CLAH7_CLAHE1.359e-2146.67Minor allergen Cla h 7 OS=Cladosporium herbarum GN... [more]
WRBA_GEOLS1.359e-2138.02Flavoprotein wrbA OS=Geobacter lovleyi (strain ATC... [more]
WRBA_METBF1.649e-2135.71Flavoprotein wrbA OS=Methanosarcina barkeri (strai... [more]
WRBA_PARDP1.768e-2136.75Flavoprotein wrbA OS=Paracoccus denitrificans (str... [more]
WRBA_OCHA42.303e-2140.43Flavoprotein wrbA OS=Ochrobactrum anthropi (strain... [more]
WRBA_ACIF55.071e-2133.33Flavoprotein wrbA OS=Acidithiobacillus ferrooxidan... [more]
WRBA_ACIF25.071e-2133.33Flavoprotein wrbA OS=Acidithiobacillus ferrooxidan... [more]
WRBA_BURA46.058e-2136.00Flavoprotein wrbA OS=Burkholderia ambifaria (strai... [more]
WRBA_BRASO6.596e-2140.00Flavoprotein wrbA OS=Bradyrhizobium sp. (strain OR... [more]
WRBA_CAUCR1.116e-2036.27Flavoprotein wrbA OS=Caulobacter crescentus GN=wrb... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00737 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00737 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623646 ID=BQ623646; Name=BQ623646; organism=Citrus sinensis; type=EST; length=591bp
CTTCATCTGTTGAGGGTGTTGAAGCCAAATTATGGCAGGTCCCTGAGACA
CTTACCTGAGGAGGTACTTGGTAAGATGAGTGCACCACCAAAGAGTGATG
TACCTATTATTACCCCCAACGAACTTGCTGAGGCTGATGGGTTTGTTTTT
GGCTTCCCAACAAGATTTGGAATGATGGCTGCTCAATTTAAAGCATTTTT
AGATGCTACTGGTGGTCTATGGAGGACACAACAGCTCGCTGGCAAACCTG
CTGGGATGTTCTACAGCACTGGGTCACAAGGTGGTGGACAAGAGACTACA
GCGTTGACGGCAATTACTCAGCTTGTTCACCATGGGATGATATTTGTTCC
TATTGGATACACATTTGGTGCTGGCATGTTTGAGATGGAGAAAGTGAAAG
GGTGGAAGTCCCTACGGTGCAGGAACTTTTGCTGGAGATGGCTCGAGACA
GCCAACTGAGCTTGAGTTGGAGCAAGCTTTCCACCAGGGAAAACACATTG
CGGGCATTGCAAAGAAGCTGAAGGGAAGTGCTTAAATATTTCAATTTACA
ATACACCATTAGGTGGACTTATTCCATTCTTTTCGTCTCTA
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