BQ623646

Overview
NameBQ623646
Unique NameBQ623646
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_CAUSK (Flavoprotein wrbA OS=Caulobacter sp. (strain K31) GN=wrbA PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 1.548e-19
Identity = 38/115 (33.04%), Postives = 53/115 (46.09%), Query Frame = 1
Query:   58 EEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 402
            EE+  K         PI   ++LA+ D  + G  TRFG M++Q  AFLD  GGLW    L GK    F               + IT L+H G+  V + Y+  AG   +E++ G
Sbjct:   44 EEIAKKSHYKLDQAAPIAKIDDLADYDAIIVGTGTRFGRMSSQMAAFLDQAGGLWARGALNGKVGAAFTSSATQHGGNETTLFSIITNLLHFGLTIVGLPYSH-AGQMTLEEITG 157          

HSP 2 Score: 51.6026 bits (122), Expect = 1.548e-19
Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 2
Query:  401 GGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKLKG 526
            GG+PYGA T AG DGSRQP+++EL+ A HQG+ +A  A KL G
Sbjct:  157 GGAPYGATTIAGGDGSRQPSQIELDGARHQGELVAKTAAKLFG 199          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA3_RHIME (Flavoprotein wrbA 3 OS=Rhizobium meliloti GN=wrbA3 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.009e-19
Identity = 43/117 (36.75%), Postives = 58/117 (49.57%), Query Frame = 1
Query:   52 LPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 402
            +PE V          + PI T  ELA+ D  V G PTRFG MA+Q K FLD TGGLW   +L GK   +F              L+    ++H GM+ V + Y+F  G   M+++ G
Sbjct:   42 VPEAVARSSGYRLGQEAPIATVAELADYDAIVIGTPTRFGNMASQMKNFLDQTGGLWAENKLVGKVGSVFTSTGSQHGGQESTILSTHVVMLHLGMVIVGLPYSF-KGQMRMDEITG 157          

HSP 2 Score: 39.2762 bits (90), Expect = 2.009e-19
Identity = 20/44 (45.45%), Postives = 28/44 (63.64%), Query Frame = 2
Query:  401 GGSPYGAGTFAGDGS---RQPTELELEQAFHQGKHIAGIAKKLK 523
            GGSPYGA T A D +   R P+  EL+ A  QG+H+A +A  ++
Sbjct:  157 GGSPYGASTLAEDENHRDRSPSANELDGARFQGRHVAEVAAAMQ 200          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_BEII9 (Flavoprotein wrbA OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=wrbA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.013e-19
Identity = 37/100 (37.00%), Postives = 48/100 (48.00%), Query Frame = 1
Query:  103 PIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 402
            PI TP +L   D  + G PTRFG + AQ   F D TGGLW    L GK    F               + +T L+HHGM+   + Y+F AG   M ++ G
Sbjct:   59 PIATPEDLVNYDAIIIGAPTRFGRLPAQMANFWDMTGGLWLKGALIGKVGAAFTSTAVQHGGQETTLYSLLTNLIHHGMVVAGLPYSF-AGQMNMNEITG 157          

HSP 2 Score: 42.743 bits (99), Expect = 2.013e-19
Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 2
Query:  401 GGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKL 520
            GGSPYGA T A GDGSR  +  E E A   G+H+A IA+KL
Sbjct:  157 GGSPYGATTIANGDGSRAVSANEQEGAKFLGRHVAEIAQKL 197          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_AZOC5 (Flavoprotein wrbA OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=wrbA PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 3.405e-19
Identity = 38/116 (32.76%), Postives = 51/116 (43.97%), Query Frame = 1
Query:   55 PEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 402
            P+EV            P+ T  +L   D  + G PTRFG +A+Q  AFLD  GGLW    L GK    F               + IT L+H GM+ V + Y+   G   M ++ G
Sbjct:   43 PDEVAKAAHFKLDQAAPVATIADLEHYDAIIVGAPTRFGRIASQMAAFLDQAGGLWFRGALNGKVGAAFTSTATQHGGQETTLFSIITNLLHFGMVIVGLPYSH-QGQMSMSEIVG 157          

HSP 2 Score: 50.447 bits (119), Expect = 3.405e-19
Identity = 26/43 (60.47%), Postives = 32/43 (74.42%), Query Frame = 2
Query:  401 GGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 526
            GG+PYGA T A GDGSRQP+E++L  A HQG+ +A  A KL G
Sbjct:  157 GGAPYGATTLAAGDGSRQPSEIDLAGARHQGELVAKTAAKLFG 199          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_METSB (Flavoprotein wrbA OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=wrbA PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 4.429e-19
Identity = 36/117 (30.77%), Postives = 52/117 (44.44%), Query Frame = 1
Query:   52 LPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 402
            +P E+  K         P+ T  +L   D  + G  TRFG M++Q   FLD  GGLW    L GK    F               + IT L+H G++ V + Y F AG   ++++ G
Sbjct:   42 VPLEIAQKSHFKLDQAAPVATIADLEHYDAIIVGTGTRFGRMSSQMANFLDQAGGLWMRGALNGKVGAAFTSTATQHGGQEVTLFSIITNLLHFGLVIVGLDYGF-AGQGRLDEITG 157          

HSP 2 Score: 52.7582 bits (125), Expect = 4.429e-19
Identity = 27/43 (62.79%), Postives = 32/43 (74.42%), Query Frame = 2
Query:  401 GGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKLKG 526
            GGSPYGA T A  DGSRQP+E EL  A +QG+ +A +A KLKG
Sbjct:  157 GGSPYGATTIAASDGSRQPSETELAGARYQGRRVAEVAGKLKG 199          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_RALME (Flavoprotein wrbA OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=wrbA PE=3 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 7.490e-19
Identity = 35/100 (35.00%), Postives = 48/100 (48.00%), Query Frame = 1
Query:  103 PIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 402
            P+ T  +LA  D  V G PTRFG +++Q  AFLD  GGLW    L GK  G F               + I  L+H GM  V + Y+   G   ++++ G
Sbjct:   59 PVATVEDLANYDAIVVGTPTRFGRISSQMAAFLDQAGGLWMRGVLNGKVGGAFTSTATQHGGQEATLFSIIANLLHFGMTIVGLPYSH-QGQMTLDEIVG 157          

HSP 2 Score: 49.6766 bits (117), Expect = 7.490e-19
Identity = 27/43 (62.79%), Postives = 30/43 (69.77%), Query Frame = 2
Query:  401 GGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKLKG 526
            GGSPYGA T AG  G RQP+ +ELE A HQG+ IA  A KL G
Sbjct:  157 GGSPYGATTIAGGQGQRQPSAIELEGARHQGELIAKTANKLFG 199          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_RHOP5 (Flavoprotein wrbA OS=Rhodopseudomonas palustris (strain BisA53) GN=wrbA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.267e-18
Identity = 40/117 (34.19%), Postives = 54/117 (46.15%), Query Frame = 1
Query:   52 LPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 402
            +P EV            P+ + ++LA  D  + G  TRFG MA+Q   FLD  GGLW    L GK  G F               + IT L+H GM+ V + Y F AG   +++V G
Sbjct:   42 VPAEVAKASHYKLDQAAPVASIDDLANYDAIIVGTGTRFGRMASQMANFLDQAGGLWAKGALHGKVGGAFTSTATQHGGQETTLFSIITNLLHFGMVVVGLNYGF-AGQMTLDEVTG 157          

HSP 2 Score: 45.0542 bits (105), Expect = 1.267e-18
Identity = 26/43 (60.47%), Postives = 29/43 (67.44%), Query Frame = 2
Query:  401 GGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKLKG 526
            GGSPYGA T  G DGSRQP+  EL  A +QG+ IA  A KL G
Sbjct:  157 GGSPYGATTITGGDGSRQPSANELAGARYQGQVIAETAIKLHG 199          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_NITWN (Flavoprotein wrbA OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=wrbA PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 1.647e-18
Identity = 37/100 (37.00%), Postives = 50/100 (50.00%), Query Frame = 1
Query:  103 PIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 402
            P+   ++LA+ D  V G  TRFG M++Q  +FLD  GGLW    L GK  G F               + IT L+H GM  V + Y F AG   +++V G
Sbjct:   59 PLAKVDDLADYDAIVVGTGTRFGRMSSQMASFLDQAGGLWARGALHGKVGGAFSSSATQHGGQETTLFSIITNLLHFGMTIVGLNYGF-AGQMGVKEVTG 157          

HSP 2 Score: 46.9802 bits (110), Expect = 1.647e-18
Identity = 26/43 (60.47%), Postives = 30/43 (69.77%), Query Frame = 2
Query:  401 GGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 526
            GG+PYGA T A GDGSR P+E EL  A +QG+ IA  A KL G
Sbjct:  157 GGAPYGATTIADGDGSRPPSENELAGARYQGRMIAETAAKLHG 199          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_OLICO (Flavoprotein wrbA OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=wrbA PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 1.647e-18
Identity = 39/117 (33.33%), Postives = 52/117 (44.44%), Query Frame = 1
Query:   52 LPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 402
            +P EV            P+    +LA  D  + G  TRFG M++Q   FLD  GGLW    L GK  G F               + IT L+H GM+ V + Y F AG   +++V G
Sbjct:   42 VPAEVAKAAHFKLDQAAPVAKVEDLANYDAIIVGTGTRFGRMSSQMANFLDQAGGLWAKGALHGKVGGAFTSTATQHGGQEMTLFSIITNLLHFGMVVVGLNYGF-AGQMGVKEVTG 157          

HSP 2 Score: 47.7506 bits (112), Expect = 1.647e-18
Identity = 26/43 (60.47%), Postives = 30/43 (69.77%), Query Frame = 2
Query:  401 GGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAKKLKG 526
            GG+PYGA T   GDGSR P+E EL  A +QG+ IA  AKKL G
Sbjct:  157 GGAPYGATTITDGDGSRLPSENELNGARYQGRTIAETAKKLHG 199          
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Match: WRBA_DIAST (Flavoprotein wrbA OS=Diaphorobacter sp. (strain TPSY) GN=wrbA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.786e-18
Identity = 38/117 (32.48%), Postives = 53/117 (45.30%), Query Frame = 1
Query:   52 LPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKG 402
            +P+E+            P+ T  EL   D  + G PTRFG M +Q  +FLD  GGLW    L GK    F               + IT L+H GM+ V + Y+F  G   +++V G
Sbjct:   42 VPQEIARSAHFKLDQSAPVATVTELENYDAIIVGAPTRFGRMPSQMGSFLDQAGGLWARGALNGKVGAAFTSTATQHGGQETTLFSIITNLLHFGMVIVGLPYSF-QGQMTLDEVVG 157          

HSP 2 Score: 42.743 bits (99), Expect = 2.786e-18
Identity = 23/43 (53.49%), Postives = 28/43 (65.12%), Query Frame = 2
Query:  401 GGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIAKKLKG 526
            GG+PYGA T AG  G RQP+  EL+ A  QG+ +A  A KL G
Sbjct:  157 GGAPYGATTIAGGQGQRQPSATELDGARFQGRLVAETANKLFG 199          
The following BLAST results are available for this feature:
BLAST of BQ623646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
WRBA_CAUSK1.548e-1933.04Flavoprotein wrbA OS=Caulobacter sp. (strain K31) ... [more]
WRBA3_RHIME2.009e-1936.75Flavoprotein wrbA 3 OS=Rhizobium meliloti GN=wrbA3... [more]
WRBA_BEII92.013e-1937.00Flavoprotein wrbA OS=Beijerinckia indica subsp. in... [more]
WRBA_AZOC53.405e-1932.76Flavoprotein wrbA OS=Azorhizobium caulinodans (str... [more]
WRBA_METSB4.429e-1930.77Flavoprotein wrbA OS=Methylocella silvestris (stra... [more]
WRBA_RALME7.490e-1935.00Flavoprotein wrbA OS=Ralstonia metallidurans (stra... [more]
WRBA_RHOP51.267e-1834.19Flavoprotein wrbA OS=Rhodopseudomonas palustris (s... [more]
WRBA_NITWN1.647e-1837.00Flavoprotein wrbA OS=Nitrobacter winogradskyi (str... [more]
WRBA_OLICO1.647e-1833.33Flavoprotein wrbA OS=Oligotropha carboxidovorans (... [more]
WRBA_DIAST2.786e-1832.48Flavoprotein wrbA OS=Diaphorobacter sp. (strain TP... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00737 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00737 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623646 ID=BQ623646; Name=BQ623646; organism=Citrus sinensis; type=EST; length=591bp
CTTCATCTGTTGAGGGTGTTGAAGCCAAATTATGGCAGGTCCCTGAGACA
CTTACCTGAGGAGGTACTTGGTAAGATGAGTGCACCACCAAAGAGTGATG
TACCTATTATTACCCCCAACGAACTTGCTGAGGCTGATGGGTTTGTTTTT
GGCTTCCCAACAAGATTTGGAATGATGGCTGCTCAATTTAAAGCATTTTT
AGATGCTACTGGTGGTCTATGGAGGACACAACAGCTCGCTGGCAAACCTG
CTGGGATGTTCTACAGCACTGGGTCACAAGGTGGTGGACAAGAGACTACA
GCGTTGACGGCAATTACTCAGCTTGTTCACCATGGGATGATATTTGTTCC
TATTGGATACACATTTGGTGCTGGCATGTTTGAGATGGAGAAAGTGAAAG
GGTGGAAGTCCCTACGGTGCAGGAACTTTTGCTGGAGATGGCTCGAGACA
GCCAACTGAGCTTGAGTTGGAGCAAGCTTTCCACCAGGGAAAACACATTG
CGGGCATTGCAAAGAAGCTGAAGGGAAGTGCTTAAATATTTCAATTTACA
ATACACCATTAGGTGGACTTATTCCATTCTTTTCGTCTCTA
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