BQ623647

Overview
NameBQ623647
Unique NameBQ623647
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length241
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK3_PETHY (S-adenosylmethionine synthetase 3 OS=Petunia hybrida GN=SAM3 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 9.090e-41
Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIA DLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  153 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAHDLKEHVIKPVIPEKYLDEKTIFH 231          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_POPDE (S-adenosylmethionine synthetase OS=Populus deltoides GN=METK PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.550e-40
Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKNGTC WLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  154 TEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 232          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK3_POPTR (S-adenosylmethionine synthetase 3 OS=Populus trichocarpa GN=METK3 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.550e-40
Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKNGTC WLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  154 TEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 232          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_GOSHI (S-adenosylmethionine synthetase OS=Gossypium hirsutum GN=SAMS PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 2.025e-40
Identity = 77/79 (97.47%), Postives = 78/79 (98.73%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKNGTCPWLRPDGKTQVTVEYYN+ GAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  153 TEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 231          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK5_POPTR (S-adenosylmethionine synthetase 5 OS=Populus trichocarpa GN=METK5 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 2.025e-40
Identity = 77/79 (97.47%), Postives = 78/79 (98.73%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKNGTC WLRPDGKTQVTVEYYNENGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  154 TEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 232          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK2_POPTR (S-adenosylmethionine synthetase 2 OS=Populus trichocarpa GN=METK2 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 2.025e-40
Identity = 77/79 (97.47%), Postives = 78/79 (98.73%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKNGTCPWLRPDGKTQVTVEY NENGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  153 TEVRKNGTCPWLRPDGKTQVTVEYLNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 231          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK1_CATRO (S-adenosylmethionine synthetase 1 OS=Catharanthus roseus GN=SAMS1 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 2.025e-40
Identity = 76/79 (96.20%), Postives = 79/79 (100.00%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTV+ISTQHDETVTND+IAADLKEHVIKPVIPEKYLDE+TIFH
Sbjct:  153 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVVISTQHDETVTNDQIAADLKEHVIKPVIPEKYLDERTIFH 231          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK2_PEA (S-adenosylmethionine synthetase 2 OS=Pisum sativum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 2.645e-40
Identity = 76/79 (96.20%), Postives = 78/79 (98.73%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKNGTCPWLRPDGKTQVTVEYYN+ GAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  155 TEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 233          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK2_BRAJU (S-adenosylmethionine synthetase 2 OS=Brassica juncea GN=MSAMS2 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 4.511e-40
Identity = 77/79 (97.47%), Postives = 78/79 (98.73%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKNGTC WLRPDGKTQVTVEY+NENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  153 TEVRKNGTCAWLRPDGKTQVTVEYFNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 231          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.695e-40
Identity = 76/79 (96.20%), Postives = 78/79 (98.73%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKNGTCPWLRPDGKTQVT+EY NE+GAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  153 TEVRKNGTCPWLRPDGKTQVTIEYINESGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 231          
The following BLAST results are available for this feature:
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 466
Match NameE-valueIdentityDescription
METK3_PETHY9.090e-4198.73S-adenosylmethionine synthetase 3 OS=Petunia hybri... [more]
METK_POPDE1.550e-4098.73S-adenosylmethionine synthetase OS=Populus deltoid... [more]
METK3_POPTR1.550e-4098.73S-adenosylmethionine synthetase 3 OS=Populus trich... [more]
METK_GOSHI2.025e-4097.47S-adenosylmethionine synthetase OS=Gossypium hirsu... [more]
METK5_POPTR2.025e-4097.47S-adenosylmethionine synthetase 5 OS=Populus trich... [more]
METK2_POPTR2.025e-4097.47S-adenosylmethionine synthetase 2 OS=Populus trich... [more]
METK1_CATRO2.025e-4096.20S-adenosylmethionine synthetase 1 OS=Catharanthus ... [more]
METK2_PEA2.645e-4096.20S-adenosylmethionine synthetase 2 OS=Pisum sativum... [more]
METK2_BRAJU4.511e-4097.47S-adenosylmethionine synthetase 2 OS=Brassica junc... [more]
METK4_ARATH7.695e-4096.20S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00738 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00738 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623647 ID=BQ623647; Name=BQ623647; organism=Citrus sinensis; type=EST; length=241bp
TTACCGAGGTTCGAAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGC
AAGACACAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCC
TGTGAGAGTTCACACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGA
CTAATGATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTT
ATTCCTGAGAAGTACCTTGATGAGAAGACTATCTTCCATCT
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