BQ623647

Overview
NameBQ623647
Unique NameBQ623647
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length241
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_SHELP (S-adenosylmethionine synthetase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=metK PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.369e-11
Identity = 32/78 (41.03%), Postives = 52/78 (66.67%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 236
            +EVRK+ T PWLRPD K+QVT  Y +       V +  V++STQH ++V+  ++   + E +IKPV+P ++L+++T F
Sbjct:  150 SEVRKDNTLPWLRPDAKSQVTFAYEDNK----IVGIDAVVLSTQHCDSVSQSDLIEGVMETIIKPVLPAQWLNKETKF 223          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_SHEHH (S-adenosylmethionine synthetase OS=Shewanella halifaxensis (strain HAW-EB4) GN=metK PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.369e-11
Identity = 33/76 (43.42%), Postives = 52/76 (68.42%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 230
            +EVRK+ T PWLRPD K+QVT   YN +G++    +  V++STQH ++V+  ++   + E +IKPV+P K+L + T
Sbjct:  150 SEVRKDKTLPWLRPDAKSQVTFA-YNPDGSI--AGIDAVVLSTQHCDSVSQSDLIEGVMETIIKPVLPAKWLSKDT 222          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_MYCUA (S-adenosylmethionine synthetase OS=Mycobacterium ulcerans (strain Agy99) GN=metK PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.369e-11
Identity = 36/70 (51.43%), Postives = 48/70 (68.57%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH-DETVTNDEIAADLKEHVIKPVIPE 209
            TEVRKNG  P+LRPDGKTQVT+ Y +     VPVR+ TV+ISTQH D+      +  D++E V+K V+ +
Sbjct:  165 TEVRKNGVLPYLRPDGKTQVTIAYEDR----VPVRLDTVVISTQHADDIDLVKTLDPDIREQVLKTVLDD 230          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_MYCMM (S-adenosylmethionine synthetase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=metK PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.369e-11
Identity = 36/70 (51.43%), Postives = 48/70 (68.57%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH-DETVTNDEIAADLKEHVIKPVIPE 209
            TEVRKNG  P+LRPDGKTQVT+ Y +     VPVR+ TV+ISTQH D+      +  D++E V+K V+ +
Sbjct:  165 TEVRKNGVLPYLRPDGKTQVTIAYEDR----VPVRLDTVVISTQHADDIDLVKTLDPDIREQVLKTVLDD 230          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_METFK (S-adenosylmethionine synthetase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=metK PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.369e-11
Identity = 29/72 (40.28%), Postives = 49/72 (68.06%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 218
            +++RK+G  PWLRPD K+QVT++Y +      P ++ TVLISTQH   ++ D++   + E +IKP +P++ +
Sbjct:  152 SQLRKDGRLPWLRPDAKSQVTIQYMDGK----PHKIDTVLISTQHAPDISLDQVRESVIEEIIKPTLPQELI 219          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_MARMS (S-adenosylmethionine synthetase OS=Marinomonas sp. (strain MWYL1) GN=metK PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.369e-11
Identity = 34/75 (45.33%), Postives = 50/75 (66.67%), Query Frame = 3
Query:    6 EVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 230
            EVRKNGT  +LRPD K+QVT  Y +ENG   P  +  V++STQH  +V   ++   + E +IKPV+P ++L ++T
Sbjct:  152 EVRKNGTLDFLRPDAKSQVTFRY-DENGK--PCAIDAVVLSTQHSASVKQADLREAVMEEIIKPVLPAEWLSKET 223          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_HAEIG (S-adenosylmethionine synthetase OS=Haemophilus influenzae (strain PittGG) GN=metK PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.369e-11
Identity = 33/77 (42.86%), Postives = 50/77 (64.94%), Query Frame = 3
Query:    6 EVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 236
            EVRK+G   WLRPD K+QVT++Y +       V V  V++STQH E V+  ++   + E +IKPV+P ++L ++T F
Sbjct:  151 EVRKSGKLAWLRPDAKSQVTLKYEDNK----IVGVDAVVLSTQHSEEVSQKDLHEGVMEEIIKPVLPSEWLSKETKF 223          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_CORU7 (S-adenosylmethionine synthetase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=metK PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.369e-11
Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 218
            TEVRK      LRPDGKTQVT EY   + A  PVR+ TV+ISTQHD   T DE+   L EHV+  V+ ++ L
Sbjct:  160 TEVRKEEIVTGLRPDGKTQVTFEY---DDAGTPVRLDTVVISTQHDPERTQDELRELLSEHVVGHVLADESL 228          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_BRAHW (S-adenosylmethionine synthetase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=metK PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.369e-11
Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            T+VRK+    +LRPDGK+QVTVEY +   A    R+  V+ISTQH   V + +I AD+K++VI  + P   LD  T ++
Sbjct:  161 TKVRKDKVVDYLRPDGKSQVTVEYKDGKAA----RIEAVVISTQHAAGVDHKQIEADIKKYVINEICPANMLDSNTKYY 235          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_THIDA (S-adenosylmethionine synthetase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=metK PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.400e-11
Identity = 31/76 (40.79%), Postives = 50/76 (65.79%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 230
            +E+RK+G  PWLRPD K+QV++ Y +      P  + TV++STQHD  V++ +++  + E +IKPV+P+  L   T
Sbjct:  153 SELRKDGRLPWLRPDAKSQVSIRYVDGK----PHSIDTVVLSTQHDPEVSHAQLSEAVIEEIIKPVLPKDMLSADT 224          
The following BLAST results are available for this feature:
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 466
Match NameE-valueIdentityDescription
METK_SHELP3.369e-1141.03S-adenosylmethionine synthetase OS=Shewanella loih... [more]
METK_SHEHH3.369e-1143.42S-adenosylmethionine synthetase OS=Shewanella hali... [more]
METK_MYCUA3.369e-1151.43S-adenosylmethionine synthetase OS=Mycobacterium u... [more]
METK_MYCMM3.369e-1151.43S-adenosylmethionine synthetase OS=Mycobacterium m... [more]
METK_METFK3.369e-1140.28S-adenosylmethionine synthetase OS=Methylobacillus... [more]
METK_MARMS3.369e-1145.33S-adenosylmethionine synthetase OS=Marinomonas sp.... [more]
METK_HAEIG3.369e-1142.86S-adenosylmethionine synthetase OS=Haemophilus inf... [more]
METK_CORU73.369e-1152.78S-adenosylmethionine synthetase OS=Corynebacterium... [more]
METK_BRAHW3.369e-1144.30S-adenosylmethionine synthetase OS=Brachyspira hyo... [more]
METK_THIDA4.400e-1140.79S-adenosylmethionine synthetase OS=Thiobacillus de... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00738 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00738 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623647 ID=BQ623647; Name=BQ623647; organism=Citrus sinensis; type=EST; length=241bp
TTACCGAGGTTCGAAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGC
AAGACACAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCC
TGTGAGAGTTCACACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGA
CTAATGATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTT
ATTCCTGAGAAGTACCTTGATGAGAAGACTATCTTCCATCT
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