BQ623647

Overview
NameBQ623647
Unique NameBQ623647
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length241
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_FRAT1 (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=metK PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.746e-11
Identity = 30/78 (38.46%), Postives = 50/78 (64.10%), Query Frame = 3
Query:    6 EVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            E+RK+G   WLRPD K QVT+ Y N+     P  + T+++STQH+E+++  E+   + E ++K VIP + + + T +H
Sbjct:  152 ELRKSGKLAWLRPDAKAQVTLAYENDK----PKFIDTIVLSTQHNESISQKELHDAVIEEIVKKVIPNELITKDTKYH 225          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_ANADF (S-adenosylmethionine synthetase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=metK PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.746e-11
Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 3
Query:   15 KNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 230
            + G   +LRPDGK+QVTVEY    G  V  R+ TV++STQH E+V+N ++ A L+E VI   +P+K +D KT
Sbjct:  150 RRGGLDFLRPDGKSQVTVEY---RGGKV-ARIDTVVVSTQHSESVSNRKLHAALREEVIAKALPKKLVDRKT 217          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_STRCO (S-adenosylmethionine synthetase OS=Streptomyces coelicolor GN=metK PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.505e-11
Identity = 33/66 (50.00%), Postives = 47/66 (71.21%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDE-IAADLKEHVIKP 197
            +EVRKNGT P+LRPDGKTQVT+EY  +      VR+ TV++S+QH   +  +  +A D+KE V++P
Sbjct:  160 SEVRKNGTIPYLRPDGKTQVTIEYDGDKA----VRLDTVVVSSQHASDIDLESLLAPDIKEFVVEP 221          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_RALSO (S-adenosylmethionine synthetase OS=Ralstonia solanacearum GN=metK PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.505e-11
Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDE 224
            +++R++G  PWLRPD K+QVTV Y N      P  V TV++STQH   ++ ++I   + E +IKPV+P   L E
Sbjct:  153 SQLRRDGRLPWLRPDAKSQVTVRYVNGK----PHSVDTVVLSTQHAPEISQEQIREAVIEEIIKPVLPSHMLAE 222          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_MARAV (S-adenosylmethionine synthetase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metK PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.505e-11
Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 3
Query:    6 EVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            E RK+G  PWLRPD K+QVT  Y  ENG +  V +  V++STQHD  VT  ++   + E ++K  +P + L + T FH
Sbjct:  152 EARKSGLLPWLRPDAKSQVTCRY--ENGKV--VGIDAVVLSTQHDPDVTQADLKEAVMELIVKHTLPAELLHKDTQFH 225          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_DESMR (S-adenosylmethionine synthetase OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=metK PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.505e-11
Identity = 32/76 (42.11%), Postives = 50/76 (65.79%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 230
            TEVRK+G   +LRPDGKTQV VEY +      PVR+  V++++QH E +++ ++   +K+ VI   +PE  +D+ T
Sbjct:  154 TEVRKSGVLDFLRPDGKTQVAVEYVDGK----PVRIDNVVVASQHAENISHADLCDAVKKEVIFHTLPESLVDKNT 225          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_CORK4 (S-adenosylmethionine synthetase OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=metK PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.505e-11
Identity = 33/69 (47.83%), Postives = 46/69 (66.67%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPE 209
            T VRK+   P LRPDGKTQVT+ Y ++N    P+R+ T++ISTQHD  V+   +   L+ +VI PVI +
Sbjct:  160 TAVRKDDIVPHLRPDGKTQVTLAYNDDNN---PIRIDTIVISTQHDPGVSRQWLEEQLRTNVITPVIKD 225          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_BAUCH (S-adenosylmethionine synthetase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=metK PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.505e-11
Identity = 36/76 (47.37%), Postives = 47/76 (61.84%), Query Frame = 3
Query:    9 VRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 236
            VRKNGT PWL PD K+QVT  Y  + G +V +   TV+ STQH E +T   +   + E +IKPV+P + L E T F
Sbjct:  152 VRKNGTLPWLCPDAKSQVTFAY--DEGKVVGI--DTVVFSTQHVENITLPNLKEAVMEEIIKPVLPIELLSEHTKF 223          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_XANOR (S-adenosylmethionine synthetase OS=Xanthomonas oryzae pv. oryzae GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.802e-11
Identity = 32/76 (42.11%), Postives = 48/76 (63.16%), Query Frame = 3
Query:   12 RKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            +KN    WLRPD K+QVT+ Y  E+G  V   +  V++STQHD  V   ++   ++E ++KPV+P K+L + T FH
Sbjct:  155 KKNSALSWLRPDAKSQVTLRY--EDG--VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKFH 226          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_XANOP (S-adenosylmethionine synthetase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.802e-11
Identity = 32/76 (42.11%), Postives = 48/76 (63.16%), Query Frame = 3
Query:   12 RKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            +KN    WLRPD K+QVT+ Y  E+G  V   +  V++STQHD  V   ++   ++E ++KPV+P K+L + T FH
Sbjct:  155 KKNSALSWLRPDAKSQVTLRY--EDG--VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKFH 226          
The following BLAST results are available for this feature:
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 466
Match NameE-valueIdentityDescription
METK_FRAT15.746e-1138.46S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_ANADF5.746e-1148.61S-adenosylmethionine synthetase OS=Anaeromyxobacte... [more]
METK_STRCO7.505e-1150.00S-adenosylmethionine synthetase OS=Streptomyces co... [more]
METK_RALSO7.505e-1143.24S-adenosylmethionine synthetase OS=Ralstonia solan... [more]
METK_MARAV7.505e-1143.59S-adenosylmethionine synthetase OS=Marinobacter aq... [more]
METK_DESMR7.505e-1142.11S-adenosylmethionine synthetase OS=Desulfovibrio m... [more]
METK_CORK47.505e-1147.83S-adenosylmethionine synthetase OS=Corynebacterium... [more]
METK_BAUCH7.505e-1147.37S-adenosylmethionine synthetase OS=Baumannia cicad... [more]
METK_XANOR9.802e-1142.11S-adenosylmethionine synthetase OS=Xanthomonas ory... [more]
METK_XANOP9.802e-1142.11S-adenosylmethionine synthetase OS=Xanthomonas ory... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00738 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00738 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623647 ID=BQ623647; Name=BQ623647; organism=Citrus sinensis; type=EST; length=241bp
TTACCGAGGTTCGAAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGC
AAGACACAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCC
TGTGAGAGTTCACACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGA
CTAATGATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTT
ATTCCTGAGAAGTACCTTGATGAGAAGACTATCTTCCATCT
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