BQ623647

Overview
NameBQ623647
Unique NameBQ623647
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length241
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_XANOM (S-adenosylmethionine synthetase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.802e-11
Identity = 32/76 (42.11%), Postives = 48/76 (63.16%), Query Frame = 3
Query:   12 RKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            +KN    WLRPD K+QVT+ Y  E+G  V   +  V++STQHD  V   ++   ++E ++KPV+P K+L + T FH
Sbjct:  155 KKNSALSWLRPDAKSQVTLRY--EDG--VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKFH 226          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_XANCB (S-adenosylmethionine synthetase OS=Xanthomonas campestris pv. campestris (strain B100) GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.802e-11
Identity = 32/76 (42.11%), Postives = 48/76 (63.16%), Query Frame = 3
Query:   12 RKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            +KN    WLRPD K+QVT+ Y  E+G  V   +  V++STQHD  V   ++   ++E ++KPV+P K+L + T FH
Sbjct:  155 KKNSALSWLRPDAKSQVTLRY--EDG--VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKFH 226          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_XANC8 (S-adenosylmethionine synthetase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.802e-11
Identity = 32/76 (42.11%), Postives = 48/76 (63.16%), Query Frame = 3
Query:   12 RKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            +KN    WLRPD K+QVT+ Y  E+G  V   +  V++STQHD  V   ++   ++E ++KPV+P K+L + T FH
Sbjct:  155 KKNSALSWLRPDAKSQVTLRY--EDG--VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKFH 226          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_XANC5 (S-adenosylmethionine synthetase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.802e-11
Identity = 32/76 (42.11%), Postives = 48/76 (63.16%), Query Frame = 3
Query:   12 RKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            +KN    WLRPD K+QVT+ Y  E+G  V   +  V++STQHD  V   ++   ++E ++KPV+P K+L + T FH
Sbjct:  155 KKNSALSWLRPDAKSQVTLRY--EDG--VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKFH 226          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_XANAC (S-adenosylmethionine synthetase OS=Xanthomonas axonopodis pv. citri GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.802e-11
Identity = 32/76 (42.11%), Postives = 48/76 (63.16%), Query Frame = 3
Query:   12 RKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            +KN    WLRPD K+QVT+ Y  E+G  V   +  V++STQHD  V   ++   ++E ++KPV+P K+L + T FH
Sbjct:  155 KKNSALSWLRPDAKSQVTLRY--EDG--VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKFH 226          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_STRGG (S-adenosylmethionine synthetase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.802e-11
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDE-IAADLKEHVIKPVIPE 209
            +EVRKNGT P+LRPDGKTQVT+EY  +      VR+ TV++S+QH   +  D  +A D++E V++ V+ +
Sbjct:  160 SEVRKNGTIPYLRPDGKTQVTIEYDGDKA----VRLDTVVVSSQHASDIDLDSLLAPDIREFVVEHVLAQ 225          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_PHOPR (S-adenosylmethionine synthetase OS=Photobacterium profundum GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.802e-11
Identity = 33/77 (42.86%), Postives = 50/77 (64.94%), Query Frame = 3
Query:    6 EVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 236
            +VRKNGT PWLRPD K+QVT  Y  + G +  V +  V++STQH + +    +   + E +IKPV+P ++L ++T F
Sbjct:  151 KVRKNGTLPWLRPDAKSQVTFAY--DQGKI--VGIDAVVLSTQHSDCIDLPVLQEAVMEEIIKPVLPAEWLTKETKF 223          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_MYCTU (S-adenosylmethionine synthetase OS=Mycobacterium tuberculosis GN=metK PE=3 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 9.802e-11
Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDE-IAADLKEHVIKPVIPE---KYLDEKTI 233
            TEVRKNG  P+LRPDGKTQVT+ Y +     VPVR+ TV+ISTQH   +  ++ +  D++E V+  V+ +   + LD  T+
Sbjct:  165 TEVRKNGVLPYLRPDGKTQVTIAYEDN----VPVRLDTVVISTQHAADIDLEKTLDPDIREKVLNTVLDDLAHETLDASTV 241          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_MYCTA (S-adenosylmethionine synthetase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.802e-11
Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDE-IAADLKEHVIKPVIPE---KYLDEKTI 233
            TEVRKNG  P+LRPDGKTQVT+ Y +     VPVR+ TV+ISTQH   +  ++ +  D++E V+  V+ +   + LD  T+
Sbjct:  165 TEVRKNGVLPYLRPDGKTQVTIAYEDN----VPVRLDTVVISTQHAADIDLEKTLDPDIREKVLNTVLDDLAHETLDASTV 241          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_MYCLE (S-adenosylmethionine synthetase OS=Mycobacterium leprae GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.802e-11
Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND-EIAADLKEHVIKPVIPE 209
            TEVRKNG  P+LR DGKTQVT+ Y +     VPVR+ TV+ISTQH   V  D  +A D++E V+  VI +
Sbjct:  165 TEVRKNGVLPYLRSDGKTQVTIAYEDN----VPVRLDTVVISTQHAAGVDLDATLAPDIREKVLNTVIDD 230          
The following BLAST results are available for this feature:
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 466
Match NameE-valueIdentityDescription
METK_XANOM9.802e-1142.11S-adenosylmethionine synthetase OS=Xanthomonas ory... [more]
METK_XANCB9.802e-1142.11S-adenosylmethionine synthetase OS=Xanthomonas cam... [more]
METK_XANC89.802e-1142.11S-adenosylmethionine synthetase OS=Xanthomonas cam... [more]
METK_XANC59.802e-1142.11S-adenosylmethionine synthetase OS=Xanthomonas cam... [more]
METK_XANAC9.802e-1142.11S-adenosylmethionine synthetase OS=Xanthomonas axo... [more]
METK_STRGG9.802e-1147.14S-adenosylmethionine synthetase OS=Streptomyces gr... [more]
METK_PHOPR9.802e-1142.86S-adenosylmethionine synthetase OS=Photobacterium ... [more]
METK_MYCTU9.802e-1145.68S-adenosylmethionine synthetase OS=Mycobacterium t... [more]
METK_MYCTA9.802e-1145.68S-adenosylmethionine synthetase OS=Mycobacterium t... [more]
METK_MYCLE9.802e-1152.86S-adenosylmethionine synthetase OS=Mycobacterium l... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00738 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00738 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623647 ID=BQ623647; Name=BQ623647; organism=Citrus sinensis; type=EST; length=241bp
TTACCGAGGTTCGAAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGC
AAGACACAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCC
TGTGAGAGTTCACACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGA
CTAATGATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTT
ATTCCTGAGAAGTACCTTGATGAGAAGACTATCTTCCATCT
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