BQ623647

Overview
NameBQ623647
Unique NameBQ623647
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length241
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_MYCLB (S-adenosylmethionine synthetase OS=Mycobacterium leprae (strain Br4923) GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.802e-11
Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND-EIAADLKEHVIKPVIPE 209
            TEVRKNG  P+LR DGKTQVT+ Y +     VPVR+ TV+ISTQH   V  D  +A D++E V+  VI +
Sbjct:  165 TEVRKNGVLPYLRSDGKTQVTIAYEDN----VPVRLDTVVISTQHAAGVDLDATLAPDIREKVLNTVIDD 230          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_MYCBO (S-adenosylmethionine synthetase OS=Mycobacterium bovis GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.802e-11
Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDE-IAADLKEHVIKPVIPE---KYLDEKTI 233
            TEVRKNG  P+LRPDGKTQVT+ Y +     VPVR+ TV+ISTQH   +  ++ +  D++E V+  V+ +   + LD  T+
Sbjct:  165 TEVRKNGVLPYLRPDGKTQVTIAYEDN----VPVRLDTVVISTQHAADIDLEKTLDPDIREKVLNTVLDDLAHETLDASTV 241          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_JANMA (S-adenosylmethionine synthetase OS=Janthinobacterium sp. (strain Marseille) GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.802e-11
Identity = 30/74 (40.54%), Postives = 49/74 (66.22%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDE 224
            +E+RK+G  PWLRPD K+QVT+ Y +      PV + T+++STQH   + + +I   + E +IKPV+P ++L +
Sbjct:  153 SELRKDGRLPWLRPDAKSQVTLRYVDGR----PVSIDTIVLSTQHAPEMQHKDIEEAVIESIIKPVVPAEWLKD 222          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_HERAR (S-adenosylmethionine synthetase OS=Herminiimonas arsenicoxydans GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.802e-11
Identity = 30/74 (40.54%), Postives = 49/74 (66.22%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDE 224
            +E+RK+G  PWLRPD K+QVT+ Y +      PV + T+++STQH   + + +I   + E +IKPV+P ++L +
Sbjct:  153 SELRKDGRLPWLRPDAKSQVTLRYVDGR----PVSIDTIVLSTQHAPEMQHKDIEEAVIESIIKPVVPAEWLKD 222          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_CHRVO (S-adenosylmethionine synthetase OS=Chromobacterium violaceum GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.802e-11
Identity = 30/77 (38.96%), Postives = 49/77 (63.64%), Query Frame = 3
Query:    6 EVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 236
            E+RK+G  PWLRPD K+Q+T  Y    G  +P R+ TV++STQH   + +  ++  + E ++KPV+P + +  +T F
Sbjct:  153 ELRKDGRLPWLRPDAKSQITCVYDAATG--LPKRIDTVVLSTQHSPDIDHKTLSEAVIEDIVKPVLPPEMITPETKF 227          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_AZOVD (S-adenosylmethionine synthetase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.802e-11
Identity = 34/79 (43.04%), Postives = 49/79 (62.03%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TE RK+G  PWLRPD K+QVT  Y  ENG +  V +  V++STQH+  +T  ++   + E +IK  +P + L + T FH
Sbjct:  151 TEARKSGLLPWLRPDAKSQVTCRY--ENGKV--VGIDAVVLSTQHNPEITQADLHEAVMELIIKHTLPAELLHKDTQFH 225          
The following BLAST results are available for this feature:
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 466
Match NameE-valueIdentityDescription
METK_MYCLB9.802e-1152.86S-adenosylmethionine synthetase OS=Mycobacterium l... [more]
METK_MYCBO9.802e-1145.68S-adenosylmethionine synthetase OS=Mycobacterium b... [more]
METK_JANMA9.802e-1140.54S-adenosylmethionine synthetase OS=Janthinobacteri... [more]
METK_HERAR9.802e-1140.54S-adenosylmethionine synthetase OS=Herminiimonas a... [more]
METK_CHRVO9.802e-1138.96S-adenosylmethionine synthetase OS=Chromobacterium... [more]
METK_AZOVD9.802e-1143.04S-adenosylmethionine synthetase OS=Azotobacter vin... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00738 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00738 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623647 ID=BQ623647; Name=BQ623647; organism=Citrus sinensis; type=EST; length=241bp
TTACCGAGGTTCGAAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGC
AAGACACAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCC
TGTGAGAGTTCACACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGA
CTAATGATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTT
ATTCCTGAGAAGTACCTTGATGAGAAGACTATCTTCCATCT
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