BQ623647

Overview
NameBQ623647
Unique NameBQ623647
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length241
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK1_PETHY (S-adenosylmethionine synthetase 1 OS=Petunia hybrida GN=SAM1 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 8.804e-36
Identity = 67/79 (84.81%), Postives = 74/79 (93.67%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKN TCPWLRPDGKTQVTVEY N+NGAM+P+RVHT+LISTQHDETVTND+IA DLKEHVIKPV+P +YLDE TIFH
Sbjct:  153 TEVRKNKTCPWLRPDGKTQVTVEYRNDNGAMIPLRVHTILISTQHDETVTNDQIAQDLKEHVIKPVVPAEYLDENTIFH 231          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK4_POPTR (S-adenosylmethionine synthetase 4 OS=Populus trichocarpa GN=METK4 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.502e-35
Identity = 68/79 (86.08%), Postives = 74/79 (93.67%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKN TCPWLRPDGKTQVTVEY NE GAMVP+RVHT+LISTQHDE VTN++IAADLKEHVIKPVIP +YLD+KTIFH
Sbjct:  153 TEVRKNKTCPWLRPDGKTQVTVEYKNEGGAMVPIRVHTILISTQHDENVTNEQIAADLKEHVIKPVIPVQYLDDKTIFH 231          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK2_TOBAC (S-adenosylmethionine synthetase 2 OS=Nicotiana tabacum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.502e-35
Identity = 69/79 (87.34%), Postives = 73/79 (92.41%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKN TCPWLRPDGKTQVTVEY N+NGAMVP+RVHTVLISTQHDE VTN++IA DLKEHVIKPVIP KYLDE TIFH
Sbjct:  153 TEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDEGVTNEQIAQDLKEHVIKPVIPAKYLDENTIFH 231          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK3_VITVI (S-adenosylmethionine synthetase 3 OS=Vitis vinifera GN=METK3 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.562e-35
Identity = 67/79 (84.81%), Postives = 74/79 (93.67%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKN TCPWLRPDGKTQVTVEY NE GAMVP+RVHTVLISTQHDETVTND+IA +L+EHVIKPVIP K++D+KTIFH
Sbjct:  153 TEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLISTQHDETVTNDQIAKELREHVIKPVIPSKFMDDKTIFH 231          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK3_CATRO (S-adenosylmethionine synthetase 3 OS=Catharanthus roseus GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.562e-35
Identity = 68/79 (86.08%), Postives = 74/79 (93.67%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKN TCPWLRPDGKTQVTVEY NE GAMVP+RVHTVLISTQHDETVTN++IA DLKEHVIKPVIP +YLD++TIFH
Sbjct:  153 TEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLISTQHDETVTNEQIAQDLKEHVIKPVIPAQYLDDQTIFH 231          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK2_ACTCH (S-adenosylmethionine synthetase 2 OS=Actinidia chinensis GN=SAM2 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 3.346e-35
Identity = 68/79 (86.08%), Postives = 73/79 (92.41%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKN TCPWLRPDGKTQVTVEY NE GAMVPVRVHTVLISTQHDETVTN++IA DLKEHVIKPVIP +Y+D+ TIFH
Sbjct:  153 TEVRKNNTCPWLRPDGKTQVTVEYRNEGGAMVPVRVHTVLISTQHDETVTNEQIAKDLKEHVIKPVIPAQYMDDDTIFH 231          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK1_ACTCH (S-adenosylmethionine synthetase 1 OS=Actinidia chinensis GN=SAM1 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 3.346e-35
Identity = 67/79 (84.81%), Postives = 73/79 (92.41%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKN TCPWLRPDGKTQVTVEY NE GAMVP+RVHTVLISTQHDETVTND+IA DLK+HVIKPV+P +YLD+ TIFH
Sbjct:  153 TEVRKNSTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLISTQHDETVTNDQIANDLKKHVIKPVVPAQYLDDNTIFH 231          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK1_PETCR (S-adenosylmethionine synthetase 1 (Fragment) OS=Petroselinum crispum GN=SMS-1 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 5.707e-35
Identity = 66/74 (89.19%), Postives = 71/74 (95.95%), Query Frame = 3
Query:   18 NGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            NGTC WLRPDGKTQVTVEY N++GAMVP+RVHT+LISTQHDETVTNDEIAADLKEHVIKPV+PE YLDEKTIFH
Sbjct:    1 NGTCAWLRPDGKTQVTVEYQNDHGAMVPIRVHTILISTQHDETVTNDEIAADLKEHVIKPVVPENYLDEKTIFH 74          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_CHLRE (S-adenosylmethionine synthetase OS=Chlamydomonas reinhardtii GN=METM PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.316e-31
Identity = 61/79 (77.22%), Postives = 68/79 (86.08%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKNG CPWLRPDGKTQVTVEY  E GAM+P RVHT+LISTQH+  VTN++I  DL EHVIKPV+P KYLD+KTIFH
Sbjct:  156 TEVRKNGVCPWLRPDGKTQVTVEYKREGGAMIPQRVHTILISTQHNPDVTNEKIREDLMEHVIKPVVPAKYLDDKTIFH 234          
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_OSTLU (S-adenosylmethionine synthetase OS=Ostreococcus lucimarinus (strain CCE9901) GN=METK-1 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.033e-28
Identity = 58/79 (73.42%), Postives = 65/79 (82.28%), Query Frame = 3
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            T VRK+GTCPW+ PDGKTQVT+EY NE GAMVP RVHT+LISTQH E VTN++IA DL   VIK V+PEKYLD  TIFH
Sbjct:  152 TVVRKDGTCPWVLPDGKTQVTIEYENEGGAMVPKRVHTILISTQHIEGVTNEKIAEDLMNEVIKKVVPEKYLDADTIFH 230          
The following BLAST results are available for this feature:
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 466
Match NameE-valueIdentityDescription
METK1_PETHY8.804e-3684.81S-adenosylmethionine synthetase 1 OS=Petunia hybri... [more]
METK4_POPTR1.502e-3586.08S-adenosylmethionine synthetase 4 OS=Populus trich... [more]
METK2_TOBAC1.502e-3587.34S-adenosylmethionine synthetase 2 OS=Nicotiana tab... [more]
METK3_VITVI2.562e-3584.81S-adenosylmethionine synthetase 3 OS=Vitis vinifer... [more]
METK3_CATRO2.562e-3586.08S-adenosylmethionine synthetase 3 OS=Catharanthus ... [more]
METK2_ACTCH3.346e-3586.08S-adenosylmethionine synthetase 2 OS=Actinidia chi... [more]
METK1_ACTCH3.346e-3584.81S-adenosylmethionine synthetase 1 OS=Actinidia chi... [more]
METK1_PETCR5.707e-3589.19S-adenosylmethionine synthetase 1 (Fragment) OS=Pe... [more]
METK_CHLRE1.316e-3177.22S-adenosylmethionine synthetase OS=Chlamydomonas r... [more]
METK_OSTLU3.033e-2873.42S-adenosylmethionine synthetase OS=Ostreococcus lu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00738 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00738 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623647 ID=BQ623647; Name=BQ623647; organism=Citrus sinensis; type=EST; length=241bp
TTACCGAGGTTCGAAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGC
AAGACACAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCC
TGTGAGAGTTCACACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGA
CTAATGATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTT
ATTCCTGAGAAGTACCTTGATGAGAAGACTATCTTCCATCT
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