BQ623659

Overview
NameBQ623659
Unique NameBQ623659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length580
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623659 vs. ExPASy Swiss-Prot
Match: CDK6_MOUSE (Cell division protein kinase 6 OS=Mus musculus GN=Cdk6 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.205e-32
Identity = 74/162 (45.68%), Postives = 108/162 (66.67%), Query Frame = 2
Query:   71 QYEKVEKIGEGTYGVVYKARNCVTN-ETIALKKIRLEQEDEGVPSTAIREISLLKEMQ---HGNIVRLQDV-----VHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGF 529
            QYE V +IGEG YG V+KAR+       +ALK++R++  +EG+P + IRE+++L+ ++   H N+VRL DV        E KL LVFE++D DL  ++D  P+       IK  ++Q+LRG+ + HSHRV+HRDLKPQN+L+   +  +KLADFGLAR + F
Sbjct:   12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTSEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV-TSSGQIKLADFGLARIYSF 172          
BLAST of BQ623659 vs. ExPASy Swiss-Prot
Match: CDK6_HUMAN (Cell division protein kinase 6 OS=Homo sapiens GN=CDK6 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.056e-32
Identity = 74/162 (45.68%), Postives = 108/162 (66.67%), Query Frame = 2
Query:   71 QYEKVEKIGEGTYGVVYKARNCVTN-ETIALKKIRLEQEDEGVPSTAIREISLLKEMQ---HGNIVRLQDV-----VHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGF 529
            QYE V +IGEG YG V+KAR+       +ALK++R++  +EG+P + IRE+++L+ ++   H N+VRL DV        E KL LVFE++D DL  ++D  P+       IK  ++Q+LRG+ + HSHRV+HRDLKPQN+L+   +  +KLADFGLAR + F
Sbjct:   12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV-TSSGQIKLADFGLARIYSF 172          
BLAST of BQ623659 vs. ExPASy Swiss-Prot
Match: CDKD1_ORYSI (Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. indica GN=CDKD-1 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.506e-32
Identity = 75/153 (49.02%), Postives = 102/153 (66.67%), Query Frame = 2
Query:   68 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFG 526
            D+Y K E +GEGTYGVV+KA +  T  T+A+KKIRL +  EGV  TA+REI LLKE++  NI+ L D    +  L+LVFE+++ DL+  +    +    P   K+++  +L+G+A+CH   VLHRD+KP NLLI      LKLADFGLAR FG
Sbjct:   17 DRYLKREVLGEGTYGVVFKADDTKTGNTVAIKKIRLGKYKEGVNFTALREIKLLKELKDSNIIELIDAFPYKGNLHLVFEFMETDLEAVIRD-RNIVLSPADTKSYIQMMLKGLAFCHKKWVLHRDMKPNNLLIG-ADGQLKLADFGLARIFG 167          
BLAST of BQ623659 vs. ExPASy Swiss-Prot
Match: CDKD1_ORYSJ (Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. japonica GN=CDKD-1 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.579e-32
Identity = 75/153 (49.02%), Postives = 102/153 (66.67%), Query Frame = 2
Query:   68 DQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFG 526
            D+Y K E +GEGTYGVV+KA +  T  T+A+KKIRL +  EGV  TA+REI LLKE++  NI+ L D    +  L+LVFE+++ DL+  +    +    P   K+++  +L+G+A+CH   VLHRD+KP NLLI      LKLADFGLAR FG
Sbjct:   17 DRYLKREVLGEGTYGVVFKAVDTKTGNTVAIKKIRLGKYKEGVNFTALREIKLLKELKDSNIIELIDAFPYKGNLHLVFEFMETDLEAVIRD-RNIVLSPADTKSYIQMMLKGLAFCHKKWVLHRDMKPNNLLIG-ADGQLKLADFGLARIFG 167          
BLAST of BQ623659 vs. ExPASy Swiss-Prot
Match: CTK1_SCHPO (CTD kinase subunit alpha OS=Schizosaccharomyces pombe GN=lsk1 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.020e-31
Identity = 73/149 (48.99%), Postives = 101/149 (67.79%), Query Frame = 2
Query:   74 YEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLK-KHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 517
            YEK+++IGEGTYG VYKA N VT + +ALK+IRLEQE +G P T +RE+ +L+ ++H NIVRL +++  +  +Y+VFEY+D DL    ++S   F   P  IK    QI   +AY H   VLHRD+K  N+L++   + LK ADFGLAR
Sbjct:  277 YEKIDQIGEGTYGKVYKAINTVTGDLVALKRIRLEQEKDGFPITTVREVKILQRLRHKNIVRLLEIMVEKSSVYMVFEYMDHDLTGVLLNSQLHFT--PGNIKHLSKQIFEALAYLHHRGVLHRDIKGSNILLNNNGD-LKFADFGLAR 422          
BLAST of BQ623659 vs. ExPASy Swiss-Prot
Match: Y7597_DROME (Cell division cycle 2-like protein kinase CG7597 OS=Drosophila melanogaster GN=CG7597 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.740e-31
Identity = 74/164 (45.12%), Postives = 105/164 (64.02%), Query Frame = 2
Query:   65 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK----------KLYLVFEYLDLDLKKHMDS-CPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF 523
            +D +E + +IGEGTYG VYKAR+  TN+ +ALKK+RLE E EG P TA+REI +L+++ H NIV L ++V  ++            YLVFEY+D DL   ++S   DF  +     + + Q+L G+ YCH    LHRD+K  N+L++ R   +KLADFGLAR +
Sbjct:  801 VDVFEMIAQIGEGTYGQVYKARDHHTNDMVALKKVRLEHEKEGFPITAVREIKILRQLNHRNIVNLHEIVTDKQDAVEFRKDKGSFYLVFEYMDHDLMGLLESGMVDFNEENN--ASIMKQLLDGLNYCHKKNFLHRDIKCSNILMNNR-GKVKLADFGLARLY 961          
BLAST of BQ623659 vs. ExPASy Swiss-Prot
Match: CDK10_RAT (Cell division protein kinase 10 OS=Rattus norvegicus GN=Cdk10 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.273e-31
Identity = 67/154 (43.51%), Postives = 110/154 (71.43%), Query Frame = 2
Query:   71 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV--HSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFG 526
            ++EK+ +IGEGTYG+VY+AR+  T+E +ALKK+R+++E +G+P +++REI+LL  ++H NIV L++VV  +  + ++LV  Y + DL   +++ P   ++ + +K  L Q+LRG+ Y H   ++HRDLK  NLL+  +   +K ADFGLARA+G
Sbjct:   36 EFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQ-VKCILLQVLRGLQYLHRSFIIHRDLKVSNLLMTDK-GCVKTADFGLARAYG 187          
BLAST of BQ623659 vs. ExPASy Swiss-Prot
Match: CDK10_MOUSE (Cell division protein kinase 10 OS=Mus musculus GN=Cdk10 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.273e-31
Identity = 66/154 (42.86%), Postives = 111/154 (72.08%), Query Frame = 2
Query:   71 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV--HSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFG 526
            ++EK+ +IGEGTYG+VY+AR+  T+E +ALKK+R+++E +G+P +++REI+LL  ++H NIV L++VV  +  + ++LV  Y + DL   +++ P   ++ + +K  + Q+LRG+ Y H + ++HRDLK  NLL+  +   +K ADFGLARA+G
Sbjct:   38 EFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQ-VKCIMLQVLRGLQYLHRNFIIHRDLKVSNLLMTDK-GCVKTADFGLARAYG 189          
BLAST of BQ623659 vs. ExPASy Swiss-Prot
Match: CDK10_HUMAN (Cell division protein kinase 10 OS=Homo sapiens GN=CDK10 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.968e-31
Identity = 66/154 (42.86%), Postives = 111/154 (72.08%), Query Frame = 2
Query:   71 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV--HSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFG 526
            ++EK+ +IGEGTYG+VY+AR+  T+E +ALKK+R+++E +G+P +++REI+LL  ++H NIV L++VV  +  + ++LV  Y + DL   +++ P   ++ + +K  + Q+LRG+ Y H + ++HRDLK  NLL+  +   +K ADFGLARA+G
Sbjct:   38 EFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQ-VKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDK-GCVKTADFGLARAYG 189          
BLAST of BQ623659 vs. ExPASy Swiss-Prot
Match: CDK10_BOVIN (Cell division protein kinase 10 OS=Bos taurus GN=CDK10 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.968e-31
Identity = 67/154 (43.51%), Postives = 111/154 (72.08%), Query Frame = 2
Query:   71 QYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV--HSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFG 526
            ++EK+ +IGEGTYG+VY+AR+  T+E +ALKK+R+++E +GVP +++REI+LL  ++H NIV L++VV  +  + ++LV  Y + DL   +++ P   ++ + +K  + Q+LRG+ Y H + ++HRDLK  NLL+  +   +K ADFGLARA+G
Sbjct:   36 EFEKLNRIGEGTYGIVYRARDTHTDEIVALKKVRMDKEKDGVPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQ-VKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDK-GCVKTADFGLARAYG 187          
The following BLAST results are available for this feature:
BLAST of BQ623659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK6_MOUSE1.205e-3245.68Cell division protein kinase 6 OS=Mus musculus GN=... [more]
CDK6_HUMAN2.056e-3245.68Cell division protein kinase 6 OS=Homo sapiens GN=... [more]
CDKD1_ORYSI3.506e-3249.02Cyclin-dependent kinase D-1 OS=Oryza sativa subsp.... [more]
CDKD1_ORYSJ4.579e-3249.02Cyclin-dependent kinase D-1 OS=Oryza sativa subsp.... [more]
CTK1_SCHPO1.020e-3148.99CTD kinase subunit alpha OS=Schizosaccharomyces po... [more]
Y7597_DROME1.740e-3145.12Cell division cycle 2-like protein kinase CG7597 O... [more]
CDK10_RAT2.273e-3143.51Cell division protein kinase 10 OS=Rattus norvegic... [more]
CDK10_MOUSE2.273e-3142.86Cell division protein kinase 10 OS=Mus musculus GN... [more]
CDK10_HUMAN2.968e-3142.86Cell division protein kinase 10 OS=Homo sapiens GN... [more]
CDK10_BOVIN2.968e-3143.51Cell division protein kinase 10 OS=Bos taurus GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00750 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00750 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623659 ID=BQ623659; Name=BQ623659; organism=Citrus sinensis; type=EST; length=580bp
GTTCTTGTCGCCGTCCGTCGGTAGCAAGGACGCCTCGTTCGTGTAGCTGT
TACATTAAGACTGAATGGACCAGTATGAAAAGGTTGAGAAGATTGGTGAA
GGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAGAC
AATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTGTGCCTA
GCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCATGGGAAC
ATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTATCTGGT
TTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTTGCCCAG
ATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAAATTCTA
CGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGATTTGAA
ACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGCTAGCAG
ATTTTGGACTGGCCAGGGCTTTTGGATTCCTGTTAGGACATTTACACATG
AGGTGGTGACATTGGGGTTCAGAACACCTG
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