BQ623659

Overview
NameBQ623659
Unique NameBQ623659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length580
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623659 vs. ExPASy Swiss-Prot
Match: CDKL4_MOUSE (Cyclin-dependent kinase-like 4 OS=Mus musculus GN=Cdkl4 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.877e-31
Identity = 64/151 (42.38%), Postives = 104/151 (68.87%), Query Frame = 2
Query:   65 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 517
            M++YEK+ KIGEG+YGVV+K RN  + + +A+KK    ++D  V   A+REI +LK+++H N+V L +V   ++K++LVFEY D  L   ++  P+  +D  +IK+ L+Q L+ + +CH H  +HRD+KP+N+LI ++   +K+ DFG AR
Sbjct:    1 MEKYEKLAKIGEGSYGVVFKCRNKSSGQVVAIKKFVESEDDRVVRKIALREIRMLKQLKHPNLVNLIEVFRRKRKMHLVFEYCDHTLLNELERNPNGVSD-GVIKSVLWQTLQALNFCHKHNCIHRDVKPENILITKQ-GMIKICDFGFAR 149          
BLAST of BQ623659 vs. ExPASy Swiss-Prot
Match: CDK13_MOUSE (Cell division protein kinase 13 OS=Mus musculus GN=Cdk13 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 3.877e-31
Identity = 71/163 (43.56%), Postives = 107/163 (65.64%), Query Frame = 2
Query:   65 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK----------KLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF 523
            +D+++ +  IGEGTYG VYKAR+  T E +ALKK+RL+ E EG P TAIREI +L+++ H +I+ ++++V  ++            YLVFEY+D DL   ++S     N+   IK+F+ Q++ G+ YCH    LHRD+K  N+L++ R   +KLADFGLAR +
Sbjct:  702 VDKFDIIGIIGEGTYGQVYKARDKDTGEMVALKKVRLDNEKEGFPITAIREIKILRQLTHQSIINMKEIVTDKEDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFNENH-IKSFMRQLMEGLDYCHKKNFLHRDIKCSNILLNNR-GQIKLADFGLARLY 862          
BLAST of BQ623659 vs. ExPASy Swiss-Prot
Match: CDK13_HUMAN (Cell division protein kinase 13 OS=Homo sapiens GN=CDK13 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 3.877e-31
Identity = 71/163 (43.56%), Postives = 107/163 (65.64%), Query Frame = 2
Query:   65 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK----------KLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF 523
            +D+++ +  IGEGTYG VYKAR+  T E +ALKK+RL+ E EG P TAIREI +L+++ H +I+ ++++V  ++            YLVFEY+D DL   ++S     N+   IK+F+ Q++ G+ YCH    LHRD+K  N+L++ R   +KLADFGLAR +
Sbjct:  702 VDKFDIIGIIGEGTYGQVYKARDKDTGEMVALKKVRLDNEKEGFPITAIREIKILRQLTHQSIINMKEIVTDKEDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFNENH-IKSFMRQLMEGLDYCHKKNFLHRDIKCSNILLNNR-GQIKLADFGLARLY 862          
BLAST of BQ623659 vs. ExPASy Swiss-Prot
Match: CDKL2_PONAB (Cyclin-dependent kinase-like 2 OS=Pongo abelii GN=CDKL2 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.613e-31
Identity = 62/151 (41.06%), Postives = 103/151 (68.21%), Query Frame = 2
Query:   65 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 517
            M++YE +  +GEG+YG+V K RN  T   +A+KK     +D+ V   A+REI LLK+++H N+V L +V   +K+ YLVFE++D  +   ++  P+   D ++++ +L+QI+ GI +CHSH ++HRD+KP+N+L+  ++  +KL DFG AR
Sbjct:    1 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS-KSGVVKLCDFGFAR 149          
BLAST of BQ623659 vs. ExPASy Swiss-Prot
Match: CDKL2_MACFA (Cyclin-dependent kinase-like 2 OS=Macaca fascicularis GN=CDKL2 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 8.637e-31
Identity = 62/151 (41.06%), Postives = 103/151 (68.21%), Query Frame = 2
Query:   65 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 517
            M++YE +  +GEG+YG+V K RN  T   +A+KK     +D+ V   A+REI LLK+++H N+V L +V   +K+ YLVFE++D  +   ++  P+   D ++++ +L+QI+ GI +CHSH ++HRD+KP+N+L+  ++  +KL DFG AR
Sbjct:    1 MEKYENLGLVGEGSYGMVVKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS-QSGVVKLCDFGFAR 149          
BLAST of BQ623659 vs. ExPASy Swiss-Prot
Match: CDKL2_HUMAN (Cyclin-dependent kinase-like 2 OS=Homo sapiens GN=CDKL2 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 8.637e-31
Identity = 62/151 (41.06%), Postives = 103/151 (68.21%), Query Frame = 2
Query:   65 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 517
            M++YE +  +GEG+YG+V K RN  T   +A+KK     +D+ V   A+REI LLK+++H N+V L +V   +K+ YLVFE++D  +   ++  P+   D ++++ +L+QI+ GI +CHSH ++HRD+KP+N+L+  ++  +KL DFG AR
Sbjct:    1 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS-QSGVVKLCDFGFAR 149          
BLAST of BQ623659 vs. ExPASy Swiss-Prot
Match: CDKL1_MOUSE (Cyclin-dependent kinase-like 1 OS=Mus musculus GN=Cdkl1 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 8.637e-31
Identity = 63/151 (41.72%), Postives = 102/151 (67.55%), Query Frame = 2
Query:   65 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 517
            M++YEK+ KIGEG+YGVV+K RN  T + +A+K+    ++D  +   A+REI +LK+++H N+V L +V   +++L+LVFEY D  +   +D       +P L+K   +Q L+ + +CH H  +HRD+KP+N+LI ++ +A+KL DFG AR
Sbjct:    1 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKRFLETEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEP-LVKNITWQTLQAVNFCHKHNCIHRDVKPENILITKQ-SAIKLCDFGFAR 149          
BLAST of BQ623659 vs. ExPASy Swiss-Prot
Match: CDKL2_RABIT (Cyclin-dependent kinase-like 2 OS=Oryctolagus cuniculus GN=CDKL2 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.128e-30
Identity = 61/151 (40.40%), Postives = 104/151 (68.87%), Query Frame = 2
Query:   65 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 517
            M++YE +  +GEG+YG+V K RN  +   +A+KK     +D+ V   A+REI LLK+++H N+V L +V   +K+ YLVFE++D  +   ++  P+  +D ++++ +L+QI+ GI +CHSH ++HRD+KP+N+L+  ++  +KL DFG AR
Sbjct:    1 MEKYENLGLVGEGSYGMVMKCRNKDSGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDD-QVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS-QSGVVKLCDFGFAR 149          
BLAST of BQ623659 vs. ExPASy Swiss-Prot
Match: CDKL1_DANRE (Cyclin-dependent kinase-like 1 OS=Danio rerio GN=cdkl1 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.128e-30
Identity = 62/151 (41.06%), Postives = 100/151 (66.23%), Query Frame = 2
Query:   65 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLAR 517
            M++YEK+ KIGEG+YGVV+K RN  T + +A+KK    ++D  +   A+REI +LK+++H N+V L +V   ++KL+LVFEY D  +   +D  P    +  ++K+ ++Q L+ + +CH    +HRD+KP+N+LI +    +KL DFG AR
Sbjct:    1 MEKYEKISKIGEGSYGVVFKCRNKDTGQIVAIKKFVESEDDPIIKKIALREIRMLKQLKHPNLVNLMEVFRRKRKLHLVFEYCDHTVLNELDRYPRGVPE-HMVKSIIWQTLQAVNFCHKQNCIHRDVKPENILITKH-QVIKLCDFGFAR 149          
BLAST of BQ623659 vs. ExPASy Swiss-Prot
Match: CDK12_HUMAN (Cell division protein kinase 12 OS=Homo sapiens GN=CDK12 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.473e-30
Identity = 71/164 (43.29%), Postives = 108/164 (65.85%), Query Frame = 2
Query:   65 MDQYEKVEKIGEGTYGVVYKARNCVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK----------KLYLVFEYLDLDLKKHMDS-CPDFANDPRLIKTFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF 523
            +D+++ +  IGEGTYG VYKAR+  T E +ALKK+RL+ E EG P TAIREI +L+++ H ++V ++++V  ++            YLVFEY+D DL   ++S    F+ D   IK+F+ Q++ G+ YCH    LHRD+K  N+L++  +  +KLADFGLAR +
Sbjct:  724 VDKFDIIGIIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLIHRSVVNMKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDH--IKSFMKQLMEGLEYCHKKNFLHRDIKCSNILLN-NSGQIKLADFGLARLY 884          
The following BLAST results are available for this feature:
BLAST of BQ623659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDKL4_MOUSE3.877e-3142.38Cyclin-dependent kinase-like 4 OS=Mus musculus GN=... [more]
CDK13_MOUSE3.877e-3143.56Cell division protein kinase 13 OS=Mus musculus GN... [more]
CDK13_HUMAN3.877e-3143.56Cell division protein kinase 13 OS=Homo sapiens GN... [more]
CDKL2_PONAB6.613e-3141.06Cyclin-dependent kinase-like 2 OS=Pongo abelii GN=... [more]
CDKL2_MACFA8.637e-3141.06Cyclin-dependent kinase-like 2 OS=Macaca fascicula... [more]
CDKL2_HUMAN8.637e-3141.06Cyclin-dependent kinase-like 2 OS=Homo sapiens GN=... [more]
CDKL1_MOUSE8.637e-3141.72Cyclin-dependent kinase-like 1 OS=Mus musculus GN=... [more]
CDKL2_RABIT1.128e-3040.40Cyclin-dependent kinase-like 2 OS=Oryctolagus cuni... [more]
CDKL1_DANRE1.128e-3041.06Cyclin-dependent kinase-like 1 OS=Danio rerio GN=c... [more]
CDK12_HUMAN1.473e-3043.29Cell division protein kinase 12 OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00750 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00750 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623659 ID=BQ623659; Name=BQ623659; organism=Citrus sinensis; type=EST; length=580bp
GTTCTTGTCGCCGTCCGTCGGTAGCAAGGACGCCTCGTTCGTGTAGCTGT
TACATTAAGACTGAATGGACCAGTATGAAAAGGTTGAGAAGATTGGTGAA
GGAACCTATGGAGTAGTTTACAAGGCCCGTAATTGTGTCACGAATGAGAC
AATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGTGTGCCTA
GCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCATGGGAAC
ATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTTATCTGGT
TTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCTTGCCCAG
ATTTTGCTAATGATCCTCGTCTGATAAAAACATTCCTTTATCAAATTCTA
CGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTTCATCGAGATTTGAA
ACCACAAAATTTGCTAATAGATCGTCGTACGAATGCACTAAAGCTAGCAG
ATTTTGGACTGGCCAGGGCTTTTGGATTCCTGTTAGGACATTTACACATG
AGGTGGTGACATTGGGGTTCAGAACACCTG
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