BQ623662

Overview
NameBQ623662
Unique NameBQ623662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length467
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5211 contig Csv1_Contig5211:75..540. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623662 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.455e-19
Identity = 53/131 (40.46%), Postives = 78/131 (59.54%), Query Frame = 3
Query:   63 LSNLPFLLCQIRP*-MLKCTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 452
            L+  P +L    P    +CTA +A+  +    +FASGSPF+ V+   GK+    QANN Y+FPG GLG ++SGA  + D ML  A+E LA+ +++E   KG++YP   +IR I+A + A V   A +  LA
Sbjct:  434 LNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPVEY-EGKLFVPGQANNAYIFPGFGLGLIMSGAIRVRDEMLLAASEALAAQVSEENYDKGLIYPPFTNIRKISANIAAKVAAKAYDLGLA 563          
BLAST of BQ623662 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.455e-19
Identity = 55/131 (41.98%), Postives = 75/131 (57.25%), Query Frame = 3
Query:   63 LSNLPFLLCQIRP*-MLKCTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 452
            L+  P +L    P    +CTA  A+  +    +FASGSPF+ V+  NGK+    QANN Y+FPG GLG ++SGA  + D ML  A+E  A  +T E   KG+++P   SIR I+A + A V   A E  LA
Sbjct:  493 LNEKPIILALSNPTSQSECTAEQAYTWSEGRAIFASGSPFKPVEY-NGKLYVSGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEAPAEQVTQEHFDKGLIFPPFTSIRKISAHIAAKVAAKAYELGLA 622          
BLAST of BQ623662 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 4.513e-19
Identity = 51/114 (44.74%), Postives = 70/114 (61.40%), Query Frame = 3
Query:  111 KCTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 452
            +CTA +A+  +    VFASGSPF+ V+  NGKI    Q+NN Y+FPG GLG ++SGA  + + ML  A+E LA   T E   KG ++P   +IR I+A + A+V   A E  LA
Sbjct:  501 ECTAEEAYNWSQGRAVFASGSPFDPVEY-NGKIHVPGQSNNAYIFPGFGLGVVISGAVRVHEDMLLAASETLADQATQENFEKGSIFPPFTNIRKISARIAASVAAKAYELGLA 613          
BLAST of BQ623662 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 7.698e-19
Identity = 50/114 (43.86%), Postives = 68/114 (59.65%), Query Frame = 3
Query:  111 KCTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 452
            +CTA  A+  +    +FASGSPF  V+  NGK+    Q+NN Y+FPG GLG ++SGA  + D ML  A+E LA  +T E    G++YP   +IR I+A + A V   A E  LA
Sbjct:  509 ECTAEQAYTWSEGRTIFASGSPFAPVEY-NGKVYVSGQSNNAYIFPGFGLGLIISGAIRVHDEMLLAASEALAEQVTQEHFDNGLIYPPFTNIRKISAHIAAKVAAKAYELGLA 621          
BLAST of BQ623662 vs. ExPASy Swiss-Prot
Match: MAOH_NEOFR (Malic enzyme, hydrogenosomal OS=Neocallimastix frontalis PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.154e-18
Identity = 45/114 (39.47%), Postives = 66/114 (57.89%), Query Frame = 3
Query:  111 KCTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 452
            +CTA +A +    N++FASGSPF+ V+   GK    NQ NN Y FPGIGLG + S A  +     Q  A  +AS  T E +  G ++P +D++R ++ EVG  V + A   ++A
Sbjct:  449 ECTAEEAVEFTDGNLIFASGSPFDPVEW-KGKTIQTNQCNNSYSFPGIGLGLVSSRATRVPFETFQVCARVIASLGTPEMLATGKIFPDLDNLRAVSLEVGIEVAKMAERMNIA 561          

HSP 2 Score: 27.335 bits (59), Expect = 5.154e-18
Identity = 16/37 (43.24%), Postives = 22/37 (59.46%), Query Frame = 2
Query:    2 LSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAE 112
            LS    +FN+E+L  +  S   KP IF +SNPT  +E
Sbjct:  414 LSTCPKLFNKEMLSYVA-SYCEKPGIFPLSNPTSRSE 449          
BLAST of BQ623662 vs. ExPASy Swiss-Prot
Match: MAO1_ACIAD (NAD-dependent malic enzyme OS=Acinetobacter sp. (strain ADP1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 8.720e-18
Identity = 40/110 (36.36%), Postives = 65/110 (59.09%), Query Frame = 3
Query:  123 ADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 452
            +D  +      + A+GSPF  V+   GK+ +++Q NN Y+FPGIGLG + SGA+ +TD ML  ++  LA      + P   L P+I  I+D++  +   V +AA+E+ +A
Sbjct:  429 SDVIQWTNGRALIATGSPFAPVNY-QGKLYNISQCNNSYIFPGIGLGVIASGAKRVTDNMLMASSNALADCSPLLQNPNADLLPAIADIQDVSKRIAFKVAKAAIEDGVA 537          

HSP 2 Score: 30.8018 bits (68), Expect = 8.720e-18
Identity = 14/37 (37.84%), Postives = 23/37 (62.16%), Query Frame = 2
Query:    2 LSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAE 112
            +SG  G+F EEV++ + E +  +P +  +SNPT   E
Sbjct:  390 VSGQPGLFTEEVIRTLAE-NCERPIVMPLSNPTSRVE 425          
BLAST of BQ623662 vs. ExPASy Swiss-Prot
Match: MAO1_SHESW (NAD-dependent malic enzyme OS=Shewanella sp. (strain W3-18-1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.474e-17
Identity = 40/114 (35.09%), Postives = 61/114 (53.51%), Query Frame = 3
Query:  108 LKCTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDL 449
            ++ T  D         + A+GSPFE V + +G+   + Q NN ++FPGIGLG L SGAR ++D ML  ++  LA          G L P ++ I  ++  +  AV + AVE+ L
Sbjct:  420 VEATPKDILHWTSGQALVATGSPFEPVVV-DGETYEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAIDGTGPLLPKLEDIHAVSKHIAFAVGKVAVEQGL 532          

HSP 2 Score: 39.2762 bits (90), Expect = 1.474e-17
Identity = 19/37 (51.35%), Postives = 25/37 (67.57%), Query Frame = 2
Query:    2 LSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAE 112
            +SGV G+F EE+++AM  S   +P IF MSNPT   E
Sbjct:  386 VSGVPGLFTEEIIRAM-HSHCARPIIFPMSNPTSRVE 421          
BLAST of BQ623662 vs. ExPASy Swiss-Prot
Match: MAO1_SHEPC (NAD-dependent malic enzyme OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=sfcA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.474e-17
Identity = 40/114 (35.09%), Postives = 61/114 (53.51%), Query Frame = 3
Query:  108 LKCTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDL 449
            ++ T  D         + A+GSPFE V + +G+   + Q NN ++FPGIGLG L SGAR ++D ML  ++  LA          G L P ++ I  ++  +  AV + AVE+ L
Sbjct:  420 VEATPKDILHWTSGQALVATGSPFEPVVV-DGETYEIAQCNNSFIFPGIGLGVLASGARHVSDAMLMASSRALAECSPLAIDGTGPLLPKLEDIHAVSKHIAFAVGKVAVEQGL 532          

HSP 2 Score: 39.2762 bits (90), Expect = 1.474e-17
Identity = 19/37 (51.35%), Postives = 25/37 (67.57%), Query Frame = 2
Query:    2 LSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAE 112
            +SGV G+F EE+++AM  S   +P IF MSNPT   E
Sbjct:  386 VSGVPGLFTEEIIRAM-HSHCARPIIFPMSNPTSRVE 421          
BLAST of BQ623662 vs. ExPASy Swiss-Prot
Match: MAO11_PHOPR (NAD-dependent malic enzyme 1 OS=Photobacterium profundum GN=sfcA1 PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.491e-17
Identity = 43/115 (37.39%), Postives = 63/115 (54.78%), Query Frame = 3
Query:  108 LKCTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 452
            ++ T AD       N + A+GSPFE V + NGK   + Q NN Y+FPGIGLG L   AR +TD ML  ++  LA          G L P ++ I+ ++ ++  AV + A+E+  A
Sbjct:  420 VEATPADIINWTDGNALVATGSPFEPV-VHNGKTYPIAQCNNSYIFPGIGLGILAVNARRVTDEMLMASSRALAECSPLAINGHGALLPPLEDIQKVSRKIAFAVAKKAIEQGKA 533          

HSP 2 Score: 33.4982 bits (75), Expect = 2.491e-17
Identity = 15/37 (40.54%), Postives = 25/37 (67.57%), Query Frame = 2
Query:    2 LSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAE 112
            +SGV G+F+E+V++ M  +   +P +F +SNPT   E
Sbjct:  386 VSGVPGLFSEDVIREM-HAHCKRPIVFPLSNPTSRVE 421          
BLAST of BQ623662 vs. ExPASy Swiss-Prot
Match: MAO1_SHEWM (NAD-dependent malic enzyme OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=sfcA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.491e-17
Identity = 40/112 (35.71%), Postives = 61/112 (54.46%), Query Frame = 3
Query:  108 LKCTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEE 443
            ++ T  D         + A+GSPFE V L NG+   + Q NN Y+FPGIGLG L +GA+ ++D ML  ++  LA         +G L P ++ I  ++  +  AV + AVE+
Sbjct:  420 VEATPKDVLHWTNGQALVATGSPFEPVAL-NGETFEIAQCNNSYIFPGIGLGVLSAGAKRVSDEMLMASSRALAECSPLALNGEGPLLPPLEEIHQVSKHIAFAVAKVAVEQ 530          

HSP 2 Score: 36.1946 bits (82), Expect = 2.491e-17
Identity = 16/37 (43.24%), Postives = 25/37 (67.57%), Query Frame = 2
Query:    2 LSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAE 112
            +SG  G+F+EE++KAM +    +P +F +SNPT   E
Sbjct:  386 VSGAPGLFSEEIIKAMHQ-HCPRPIVFPLSNPTSRVE 421          
The following BLAST results are available for this feature:
BLAST of BQ623662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
MAOX_PHAVU3.455e-1940.46NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOC_FLATR3.455e-1941.98NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_ORYSJ4.513e-1944.74NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOC_FLAPR7.698e-1943.86NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOH_NEOFR5.154e-1839.47Malic enzyme, hydrogenosomal OS=Neocallimastix fro... [more]
MAO1_ACIAD8.720e-1836.36NAD-dependent malic enzyme OS=Acinetobacter sp. (s... [more]
MAO1_SHESW1.474e-1735.09NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHEPC1.474e-1735.09NAD-dependent malic enzyme OS=Shewanella putrefaci... [more]
MAO11_PHOPR2.491e-1737.39NAD-dependent malic enzyme 1 OS=Photobacterium pro... [more]
MAO1_SHEWM2.491e-1735.71NAD-dependent malic enzyme OS=Shewanella woodyi (s... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00753 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00753 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623662 ID=BQ623662; Name=BQ623662; organism=Citrus sinensis; type=EST; length=467bp
TTTGTCTGGCGTAGGTGGTGTCTTCAATGAAGAGGTGCTTAAGGCTATGC
GAGAGTCTGATTCTGTCAAACCTGCCATTTTTGCTATGTCAAATCCGACC
ATGAATGCTGAAATGCACTGCTGCTGATGCTTTTAAGCATGCTGGGGAAA
ATATAGTGTTTGCTAGTGGAAGTCCTTTTGAGAATGTTGATCTGGGAAAT
GGGAAAATAGGCCATGTAAATCAAGCAAATAACATGTATCTGTTCCCTGG
GATTGGTTTGGGAACTCTCCTTTCAGGTGCTCGTTTTATAACAGATGGAA
TGTTACAACAAGCTGCAGAATGCCTTGCGTCCTATATGACCGATGAGGAA
ATTCCAAAAGGCATTCTGTATCCATCTATTGACAGTATTCGAGATATTAC
GGCAGAAGTTGGAGCAGCTGTTCTACGAGCAGCAGTTGAGGAAGACTTGG
CAAAAGGTCATGGTGAA
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