BQ623664

Overview
NameBQ623664
Unique NameBQ623664
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.877e-47
Identity = 92/202 (45.54%), Postives = 130/202 (64.36%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW-SGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGSTG 604
            QAVA R GSD S +Y+C        L  +++ RQFY  C + GT+DFIFG+AA V Q C I  R+P  NQ N +TAQG+ DPNQ++G+ IQ+C I A  +++A      TYLGRPWK +S TV+M++ I  V+ P+GW  W SG     ++ Y EY+NTG G+D + RVKW+ +K + + AEA  +T A  + G+ W+ +TG
Sbjct:  385 QAVAFRSGSDFSVYYQCSFDGFQDTLYPHSN-RQFYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLSNQFNTITAQGKKDPNQSSGMSIQRCTISANGNVIA-----PTYLGRPWKEFSTTVIMETVIGAVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATLLHGADWIPATG 580          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.131e-47
Identity = 98/210 (46.67%), Postives = 121/210 (57.62%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWS-GNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAG-STWLGSTGFPFSLGL 625
            QAVALRV +D +  Y C +      L ++T  RQFY  C I GTVDFIFGN  AVLQNC +  R+P  NQ  MVTAQGR +P Q   IV+Q C I   +D  ++    +TYLGRPWK YSRT++MQS I   I P GW  W+  NF  DT +YAEYQN G GA    R+ W  F+       AQ +TA  +I     WL     P+  G+
Sbjct:  163 QAVALRVSADKAIIYNCQIDGYQDTLYVHT-YRQFYRDCTITGTVDFIFGNGEAVLQNCKVIVRKPAQNQSCMVTAQGRTEPIQKGAIVLQNCEIKPDTDYFSLSPPSKTYLGRPWKEYSRTIIMQSYIDKFIEPEGWAPWNITNFGRDTSYYAEYQNRGPGAALDKRITWKGFQKGFTGEAAQKFTAGVYINNDENWLQKANVPYEAGM 371          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.650e-44
Identity = 90/200 (45.00%), Postives = 121/200 (60.50%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNF--ALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAG-STWL 592
            QAVA R  SD S +YRC        L  +++ RQ+Y +C + GTVDFIFG    V Q C I  R+P PNQ N +TA+G  + NQNTGI I +C I    ++ A      TYLGRPWK +S+TV+MQS I   +NPAGW  W+  +     T+FY EY+N+G G+D S RVKW+ +K I++  EA  +T   F+ G   W+
Sbjct:  765 QAVAFRSDSDRSVYYRCSFDGYQDTLYTHSN-RQYYRNCDVTGTVDFIFGAGTVVFQGCSIRPRQPLPNQFNTITAEGTQEANQNTGISIHQCTISPNGNVTAT-----TYLGRPWKLFSKTVIMQSVIGSFVNPAGWIAWNSTYDPPPRTIFYREYKNSGPGSDLSKRVKWAGYKPISSDDEAARFTVKYFLRGDDNWI 958          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 8.443e-40
Identity = 87/209 (41.63%), Postives = 120/209 (57.42%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDD-PNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 625
            QAVALRV  D +  + C        L +    RQFY + +++GTVDFIFG +A V+QN  I  R+ +P Q N VTA G +       GIV+  CRI    +L A K + ++YLGRPWK+++ TV++ ++I D+I P GW EW G     T  Y E+ N G GA T+ R  W   KV  +AAE +TYT AN++  + W+     P  LGL
Sbjct:  383 QAVALRVNGDRAVIFNCRFDGYQDTLYVNNG-RQFYRNIVVSGTVDFIFGKSATVIQNSLILVRKGSPGQSNYVTADGNEKGAAMKIGIVLHNCRIIPDKELEADKLTIKSYLGRPWKKFATTVIIGTEIGDLIKPEGWTEWQGEQNHKTAKYIEFNNRGPGAATTQRPPW--VKVAKSAAEVETYTVANWVGPANWIQEANVPVQLGL 588          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME54_ARATH (Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis thaliana GN=PME54 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.440e-39
Identity = 86/179 (48.04%), Postives = 109/179 (60.89%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQR-NMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW--SGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVI 529
            QA+AL + SD S  YRC +      L    +LRQFY  C I GT+DFIFGNAAAV Q+C+I  RRP+  +  N++ A GR D  QNTG  +  CRI   SDL  VK  + +YLGRPW++YSR +VM+S I D I   GW  W  SG+  L TL++ E++N G  A  S RV W  F  I
Sbjct:  302 QAIALSITSDQSVLYRCSISGYQDTLYA-AALRQFYRECDIYGTIDFIFGNAAAVFQSCNIFLRRPHGVKAYNVILANGRTDQRQNTGFALHSCRIRTDSDLSPVKHKYSSYLGRPWRKYSRAIVMESYIDDAIAEGGWAGWLDSGDEVLKTLYFGEFKNYGPKARISKRVTWEGFHSI 479          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.208e-39
Identity = 88/210 (41.90%), Postives = 118/210 (56.19%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYT-SLRQFYTSCIIAGTVDFIFGNAAAVLQNCDI-----HARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLL----AVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGST 601
            QAVA R  SD S    C+   +    ++Y  SLRQFY  C I G VDFIFGN+AAV Q+CDI     H++       N +TA GR D +Q+TG V   C I  T + +    A     + +LGRPWK +SRTV +  ++  +I+P GW  W+G+FAL TL+Y EY+NTG G+  S+RV WS+            Y+ ANFI    W  +T
Sbjct:  397 QAVAFRSDSDFSVLENCEF--LGNQDTLYAHSLRQFYKQCRIQGNVDFIFGNSAAVFQDCDILIASKHSKLEQGGANNAITAHGRIDASQSTGFVFLNCSINGTEEYMKEFQANPEGHKNFLGRPWKEFSRTVFVNCNLESLISPDGWMPWNGDFALKTLYYGEYKNTGPGSVRSSRVPWSS---EIPEKHVDVYSVANFIQADEWASTT 601          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.190e-39
Identity = 89/205 (43.41%), Postives = 117/205 (57.07%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYT-SLRQFYTSCIIAGTVDFIFGNAAAVLQNCDI----HARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGS----FETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTW 589
            QAVA R  SD S    C+   +    ++Y   LRQFY +C I G VDFIFGN+AAV Q+C+I        P   ++N VTAQGR DP+Q+TG V   C I  T + + +  +     + +LGRPWK YSRTV +  ++  +I P GW  WSG+FAL TL+Y E +NTG G+D S RV WS+            Y+ ANFI    W
Sbjct:  347 QAVAFRSDSDFSLIENCEF--LGNQDTLYAHGLRQFYKNCRIQGNVDFIFGNSAAVFQDCEILIAPRQINPEKGEKNAVTAQGRIDPSQSTGFVFLNCLINGTEEYMKLFKANPKVHKNFLGRPWKDYSRTVFIGCNLEALITPDGWLPWSGDFALKTLYYGESKNTGPGSDRSQRVSWSS---QIPDEHVHVYSVANFIQADEW 546          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.335e-39
Identity = 88/212 (41.51%), Postives = 116/212 (54.72%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTA-----ANFIAGSTWLGSTGFPFSLG 622
            QAVALRV +D + FY C M      L +  S RQFY  C I+GT+DF+FG    V QNC +  R P   Q+ +VTA GR+  N  + +V Q         L +V     +YLGRPWK+YS+ V+M S I  +  P G+  W G+   +T  Y EY N G GADT+ RVKW   KV+T+   A+ Y        N  A  TW+  +G P+SLG
Sbjct:  236 QAVALRVTADQAIFYNCQMDGFQDTLYVQ-SQRQFYRDCSISGTIDFVFGERFGVFQNCKLVCRLPAKGQQCLVTAGGREKQNSASALVFQSSHFTGEPALTSVTPKV-SYLGRPWKQYSKVVIMDSTIDAIFVPEGYMPWMGSAFKETCTYYEYNNKGPGADTNLRVKWHGVKVLTSNVAAEYYPGKFFEIVNATARDTWIVKSGVPYSLG 445          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.219e-38
Identity = 87/209 (41.63%), Postives = 116/209 (55.50%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDP-NQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 625
            QAVA+RV  D +  + C        L +    RQFY + +++GTVDFIFG +A V+QN  I  R+ N  Q N VTA G +       GIV+Q CRI     L A +   E+YLGRPWK++S TV++ S+I DVI P GW  W G     +  Y EY N G GA T+ RV W   K+  +AAE   +T AN++    W+     P +LGL
Sbjct:  390 QAVAIRVNGDRAVIFNCRFDGYQDTLYVNNG-RQFYRNIVVSGTVDFIFGKSATVIQNSLIVVRKGNKGQFNTVTADGNEKGLAMKIGIVLQNCRIVPDKKLAAERLIVESYLGRPWKKFSTTVIINSEIGDVIRPEGWKIWDGESFHKSCRYVEYNNRGPGAITNRRVNW--VKIARSAAEVNDFTVANWLGPINWIQEANVPVTLGL 595          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.633e-38
Identity = 84/209 (40.19%), Postives = 120/209 (57.42%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQ-NTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 625
            QAVA RV  D +  + C        L +    RQFY + +++GTVDFIFG +A V+QN  I  R+ +P Q N VTA G +       GIV+  CRI A  +L A + + ++YLGRPWK ++ T V+ ++I D+I P GW EW G     T  Y E+ N G GA+T+ RV W+  K+  +AAE + +T AN++  + W+     P  LGL
Sbjct:  379 QAVAFRVNGDRAVIFNCRFDGYQDTLYVNNG-RQFYRNIVVSGTVDFIFGKSATVIQNSLILCRKGSPGQTNHVTADGNEKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANTAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVPVQLGL 584          
The following BLAST results are available for this feature:
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
PME1_ARATH1.877e-4745.54Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PME_PETIN7.131e-4746.67Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=... [more]
PME26_ARATH5.650e-4445.00Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME37_ARATH8.443e-4041.63Probable pectinesterase/pectinesterase inhibitor V... [more]
PME54_ARATH1.440e-3948.04Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME64_ARATH3.208e-3941.90Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME51_ARATH4.190e-3943.41Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME_MEDSA9.335e-3941.51Pectinesterase/pectinesterase inhibitor OS=Medicag... [more]
PME5_ARATH1.219e-3841.63Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 P... [more]
PME_BRANA4.633e-3840.19Probable pectinesterase/pectinesterase inhibitor O... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00755 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00755 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623664 ID=BQ623664; Name=BQ623664; organism=Citrus sinensis; type=EST; length=691bp
TCAAGCCGTGGCACTGAGAGTAGGATCAGATTTATCAGCATTCTATAGGT
GTGACATGCCTAGCATACCAAGACACCTCTCTATGTACACCTCACTTCGC
CAATTTTATACCAGCTGCATTATAGCAGGCACAGTGGACTTCATTTTCGG
AAATGCAGCAGCTGTGTTGCAAAACTGTGACATCCATGCTCGCCGCCCCA
ATCCAAACCAAAGGAACATGGTCACGGCACAAGGCCGCGACGACCCGAAT
CAGAACACAGGCATAGTGATACAAAAATGCAGGATTGGTGCAACATCAGA
TTTACTTGCTGTAAAGGGCAGCTTTGAGACATATTTAGGCAGGCCATGGA
AGCGGTACTCGAGGACTGTTGTGATGCAATCTGATATAAGTGATGTTATT
AACCCAGCTGGGTGGTATGAATGGAGTGGGAATTTTGCATTGGACACATT
GTTTTATGCAGAGTATCAAAACACAGGTGCTGGTGCTGACACATCGAATA
GGGTGAAATGGAGCACATTCAAGGTGATTACTAATGCAGCTGAGGCTCAA
ACTTATACAGCTGCGAATTTTATTGCAGGGAGTACTTGGCTTGGCTCCAC
TGGGTTTCCTTTCTCTCTTGGTCTGTGAATTTGTCATACATAGGCCATAG
CTAAGCTCAGCTGCCTATAAATGTCCTAGCTAGCATACATA
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