BQ623664

Overview
NameBQ623664
Unique NameBQ623664
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3965 contig Csv1_Contig3965:931..1618. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.032e-37
Identity = 83/209 (39.71%), Postives = 116/209 (55.50%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRD-DPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 625
            QA A+RV  D +  + C        L +    RQFY +C+++GTVDFIFG +A V+QN  I  R+ +  Q N VTA G +       GIV+Q CRI     L   + +  TYLGRPWK++S TV+M +++ D+I P GW  W G     +  Y EY N G GA  + RV W+  KV  +AAE   +TAAN++    W+     P ++GL
Sbjct:  383 QAAAIRVNGDRAVIFNCRFDGYQDTLYVNNG-RQFYRNCVVSGTVDFIFGKSATVIQNTLIVVRKGSKGQYNTVTADGNELGLGMKIGIVLQNCRIVPDRKLTPERLTVATYLGRPWKKFSTTVIMSTEMGDLIRPEGWKIWDGESFHKSCRYVEYNNRGPGAFANRRVNWA--KVARSAAEVNGFTAANWLGPINWIQEANVPVTIGL 588          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.152e-35
Identity = 81/209 (38.76%), Postives = 117/209 (55.98%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQ-NTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 625
            QAVA RV  D +  + C        L +    RQFY + +++GTVDFI G +A V+QN  I  R+ +P Q N VTA G+        GIV+  CRI A  +L A + + ++YLGRPWK ++ T V+ ++I D+I P GW EW G     T  Y E+ N G GA+ + RV W+  K+  +AAE + +T AN++  + W+        LGL
Sbjct:  366 QAVAFRVNGDRAVIFNCRFDGYQDTLYVNNG-RQFYRNIVVSGTVDFINGKSATVIQNSLILCRKGSPGQTNHVTADGKQKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANPAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVTVQLGL 571          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.068e-34
Identity = 71/138 (51.45%), Postives = 93/138 (67.39%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGW 415
            QAVALR+ +D++  YRC + +    L  Y+  RQFY  C I GTVDFIFG AAAV Q C I AR+P   Q N++TAQ R++    +G   QKC I A+SDL  +KG+ +T+LGRPW+ +SR V M+S I DVI+ AGW
Sbjct:  150 QAVALRISTDMTIIYRCRIDAYQDTLYAYSG-RQFYRDCYITGTVDFIFGRAAAVFQYCQIEARKPGIGQTNILTAQSREEDTATSGFSFQKCNISASSDLTPIKGTVKTFLGRPWRAFSRVVFMESFIDDVIDRAGW 286          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.765e-29
Identity = 76/198 (38.38%), Postives = 111/198 (56.06%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSL-RQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWL 592
            QAVALRV +D +AF+ C M  +    ++Y  L R +Y  C I G+VDFIFGNA ++ + C +HA     ++   VTAQGR    ++TG    KC++  T  L         YLGR W  +SR V   + + ++I P GWY W       T+FY +Y+ TGAGA+   RV W+  + +T+  EA+ + +  FI GS W+
Sbjct:  201 QAVALRVSADNAAFFGCRM--LGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHAIA---DKLGAVTAQGRSSVLEDTGFSFVKCKVTGTGVL---------YLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFYGQYKCTGAGANYGGRVAWA--RELTD-EEAKPFLSLTFIDGSEWI 381          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.677e-28
Identity = 70/197 (35.53%), Postives = 107/197 (54.31%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWL 592
            +AVALRV +D +AFY C + S    L +  +   ++ +C I G  DFI G+A+++ + C +H+  PN      +TAQ R    + +G     C++          GS  T+LGRPW  YSR V   S  S+V+ P GW +W  +   +T++Y EY+  G GAD   RV+WS  K +++  EA  + + +FI G  WL
Sbjct:  152 RAVALRVAADKAAFYGCVITSYQDTL-LDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSPN---NGSITAQMRTSATEKSGFTFLGCKL---------TGSGSTFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQWGDSTKENTVYYGEYKCYGPGADREQRVEWS--KQLSD-EEATVFLSKDFIGGKDWL 332          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.637e-25
Identity = 71/197 (36.04%), Postives = 92/197 (46.70%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWL 592
            QAVALR+  D + FYR  +      L        FY  C I G VDFIFGNA ++ Q+CDIH+      +   + A  RD   ++TG     C I  T  +         YLGR W  YSRTV     I+D+I P GW +W        + + EY   G GA+   RV WS  K +T   E + +    FI G  WL
Sbjct:  198 QAVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYFY-QCYIQGNVDFIFGNAKSLYQDCDIHS---TAKRYGAIAAHHRDSETEDTGFSFVNCDISGTGQI---------YLGRAWGNYSRTVYSNCFIADIITPVGWSDWKHPERQRKVMFGEYNCRGRGAERGGRVPWS--KTLTR-DEVKPFLGREFIYGDQWL 378          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.468e-23
Identity = 69/202 (34.16%), Postives = 100/202 (49.50%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDI--HARRPNPNQRNM---VTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWL 592
            QAVA+R+  D SAF  C        L      R ++  C I G++DFIFGNA ++ Q+C I   A + +P  + +   VTA GR   ++N+G     C IG T  +         +LGR W+ YSR V + + ++DVI P GW  ++      T+FY EY  +G GAD S R   + +    N  +       +FI G  WL
Sbjct:  200 QAVAIRIAGDESAFVGCGFFGAQDTLHDDRG-RHYFKDCYIQGSIDFIFGNAKSLYQDCRIISMANQLSPGSKAVNGAVTANGRSSKDENSGFSFVNCTIGGTGHV---------WLGRAWRPYSRVVFVSTTMTDVIAPEGWNNFNDPSRDATIFYGEYNCSGPGADMSKR---APYVQKLNETQVALLINTSFIDGDQWL 388          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.468e-23
Identity = 68/202 (33.66%), Postives = 100/202 (49.50%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIH--ARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGST 601
            QAVALR+  D +AFY C        L +    R F+  C I G++DFIFGN  ++ Q+C I+  A+         +TAQGR   ++ +G     C+I          GS E  LGR W  Y+  V   + +S +I P GW  W  +    T+ + E++  G GAD   RV +   K +T+ +EA ++   +FI G  WL  T
Sbjct:  200 QAVALRIEGDQAAFYGCGFYGAQDTL-LDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSGFSFVNCKID---------GSGEILLGRAWGAYATVVFSNTYMSGIITPEGWNNWGDSTKEKTVTFGEHKCYGPGADYKERVLFG--KQLTD-SEASSFIDVSFIDGDEWLRHT 388          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME52_ARATH (Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.223e-23
Identity = 66/202 (32.67%), Postives = 104/202 (51.49%), Query Frame = 2
Query:    5 AVALRVGSDLSAFYRCDMPSIPRHLSMYTSL-RQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQR---NMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGS 598
            AVA+ V  D SAFY CD   +    +++ +L R  + +C I G +DFIFG+  +V ++C I+A       +     +TAQGR   +  +G V  +          +V GS   YLGR +  +SR + +Q+D+S V++P GWY W       +  YAE +  GAG+D S RV W     + +    Q ++ +NFI    W+ +
Sbjct:  101 AVAISVYGDKSAFYNCDFLGLQD--TVWDNLGRHHFKNCYIEGAIDFIFGSGQSVYEDCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLRG---------SVSGSTSVYLGRAYGPFSRVIFIQTDLSSVVHPEGWYSWHYGGYEMSFTYAEVECKGAGSDMSRRVPW--IDKLHSFYTKQQFSISNFIDQDQWISN 289          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.210e-23
Identity = 65/197 (32.99%), Postives = 100/197 (50.76%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWL 592
            QAVAL+V  D +AFY C        L +    R F+  C I G++DFIFGN  ++ ++C +H+     N    +TA G+D     TG V   C+I          GS   +LGR W+ Y+R +  ++ +S V++  GW +        T++Y E++  G GA+ S RV   T+  + +  EA  +T  +FI G  WL
Sbjct:  151 QAVALKVVGDKAAFYGCGFYGNQDTL-LDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHSIAKE-NTIGCITANGKDTLKDRTGFVFVNCKI---------TGSARVWLGRAWRPYARVIFSKTYMSRVVSLDGWNDMGDPKTQRTVYYGEHRCYGPGANHSKRV---TYAKLLSDVEAAPFTNISFIDGEEWL 333          
The following BLAST results are available for this feature:
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
PME4_ARATH1.032e-3739.71Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 P... [more]
PME_BRACM2.152e-3538.76Pectinesterase/pectinesterase inhibitor (Fragment)... [more]
PME56_ARATH1.068e-3451.45Probable pectinesterase 56 OS=Arabidopsis thaliana... [more]
PME53_ARATH1.765e-2938.38Probable pectinesterase 53 OS=Arabidopsis thaliana... [more]
PME11_ARATH5.677e-2835.53Putative pectinesterase 11 OS=Arabidopsis thaliana... [more]
PME62_ARATH2.637e-2536.04Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT... [more]
PME8_ARATH2.468e-2334.16Probable pectinesterase 8 OS=Arabidopsis thaliana ... [more]
PME15_ARATH2.468e-2333.66Probable pectinesterase 15 OS=Arabidopsis thaliana... [more]
PME52_ARATH3.223e-2332.67Putative pectinesterase 52 OS=Arabidopsis thaliana... [more]
PME14_ARATH4.210e-2332.99Putative pectinesterase 14 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00755 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00755 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623664 ID=BQ623664; Name=BQ623664; organism=Citrus sinensis; type=EST; length=691bp
TCAAGCCGTGGCACTGAGAGTAGGATCAGATTTATCAGCATTCTATAGGT
GTGACATGCCTAGCATACCAAGACACCTCTCTATGTACACCTCACTTCGC
CAATTTTATACCAGCTGCATTATAGCAGGCACAGTGGACTTCATTTTCGG
AAATGCAGCAGCTGTGTTGCAAAACTGTGACATCCATGCTCGCCGCCCCA
ATCCAAACCAAAGGAACATGGTCACGGCACAAGGCCGCGACGACCCGAAT
CAGAACACAGGCATAGTGATACAAAAATGCAGGATTGGTGCAACATCAGA
TTTACTTGCTGTAAAGGGCAGCTTTGAGACATATTTAGGCAGGCCATGGA
AGCGGTACTCGAGGACTGTTGTGATGCAATCTGATATAAGTGATGTTATT
AACCCAGCTGGGTGGTATGAATGGAGTGGGAATTTTGCATTGGACACATT
GTTTTATGCAGAGTATCAAAACACAGGTGCTGGTGCTGACACATCGAATA
GGGTGAAATGGAGCACATTCAAGGTGATTACTAATGCAGCTGAGGCTCAA
ACTTATACAGCTGCGAATTTTATTGCAGGGAGTACTTGGCTTGGCTCCAC
TGGGTTTCCTTTCTCTCTTGGTCTGTGAATTTGTCATACATAGGCCATAG
CTAAGCTCAGCTGCCTATAAATGTCCTAGCTAGCATACATA
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