BQ623664

Overview
NameBQ623664
Unique NameBQ623664
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3965 contig Csv1_Contig3965:931..1618. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.181e-23
Identity = 62/171 (36.26%), Postives = 87/171 (50.88%), Query Frame = 2
Query:    5 AVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHAR--RPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKW 511
            AVA  +G D SAFY      I   L   +  R ++  C I G VDFI G+  ++ Q+C I     +  P     +TAQGR + N   G V   C          V G  + YLGR W+ YSR +   S+++DV++P GW+EW+       L YAE+   G+G++TS R KW
Sbjct:  139 AVAAFIGGDKSAFYSVGFAGIQDTL-WDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGVTGYITAQGRTNANDANGFVFINC---------LVHGFGKAYLGRAWRPYSRVIFYNSNLTDVVDPLGWWEWNYQGYEKQLTYAEHGCFGSGSNTSRRAKW 299          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME10_ARATH (Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.379e-23
Identity = 63/177 (35.59%), Postives = 82/177 (46.33%), Query Frame = 2
Query:   98 RQFYTSCIIAGTVDFIFGNAAAVLQNCDIHAR---RPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQT--YTAANFIAGSTWLGSTGFPF 613
            R +Y  C+I+G +DFIFG A ++ + C +  R    P       +TAQGRD P    G V + C          V GS +  LGR WK YSR +  +S  SD I P GW  W        + + E+  TG GADTS RV W     +T A+E     +T   FI    WL      F
Sbjct:  177 RHYYKRCVISGGIDFIFGGAQSIFEGCTLKLRVGIYPPNEVYGTITAQGRDSPTDKGGFVFKDC---------TVMGSGKALLGRAWKSYSRVIFYRSMFSDNILPIGWDAWKAKGQEGHITFVEFGCTGVGADTSKRVPW-----LTKASEKDVLQFTNLTFIDEEGWLSRLPIKF 339          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.655e-22
Identity = 67/204 (32.84%), Postives = 97/204 (47.55%), Query Frame = 2
Query:    5 AVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHAR--RPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGSTGFP 610
            AVA  +G D SAFY      I   L  +   R ++  C I G VDFIFG   ++ Q+C I     +  P     +TAQGR +P    G +   C          V G+   +LGRPW+ YSR +   S+++DV+ P GW  W+     + L +AE+   G+GA+   RVKW   K ++ +A  Q     +FI    W+     P
Sbjct:  144 AVAALIGGDKSAFYSVGFAGIQDTLWDFDG-RHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEPGLAGYITAQGRTNPYDANGFIFINC---------LVYGTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGWDAWNFVGHENQLVFAEHGCFGSGANIGRRVKW--VKKLSESA-IQNLADLSFINRGGWVEDLPIP 334          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.769e-21
Identity = 65/201 (32.34%), Postives = 104/201 (51.74%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSL-RQFYTSCIIAGTVDFIFGNAAAVLQNCDIHA---RRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWL 592
            Q+VA  V +D  AFY C   S+  H +++ +  R +Y  C I G++DFIFG A ++  NC+I     +R  P     +TA  R+   + TG V  + +         V G  E YLGR    YSR +  ++ +S  + P GW  WS + +   L++ EY+  G GA+   R  W+  K +T   E +++ + +FI G++WL
Sbjct:  152 QSVAAFVAADKVAFYHCAFYSL--HNTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEIFVISDKRVKPY--GSITAHHRESAEEKTGYVFIRGK---------VYGIDEVYLGRAKGPYSRVIFAKTYLSKTVVPDGWTNWSYHGSTQNLYHGEYKCHGPGAERQKRSDWA--KDLTK-QEVESFLSIDFIDGTSWL 336          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.940e-21
Identity = 59/171 (34.50%), Postives = 86/171 (50.29%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWS 514
            QAVA+RV +D  AFY C        L ++   +Q+   C I G+VDFIFGN+ A+L++C IH +      +  +TAQ R    ++TG V  +C I           S   YLGRPW  + R V+  + +   I   GW+ W       +  + EY+  G G+ +S RV WS
Sbjct:  121 QAVAIRVTADRCAFYNCRFLGWQDTLYLHHG-KQYLKDCYIEGSVDFIFGNSTALLEHCHIHCK-----SQGFITAQSRKSSQESTGYVFLRCVITGNGQ------SGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNAENERSACFYEYRCFGPGSCSSERVPWS 279          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.336e-20
Identity = 62/197 (31.47%), Postives = 93/197 (47.21%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWL 592
            QA+A+R+ +D +AFY C        L        F+  C I GT DFIFG  A++  N  +HA     +   ++TAQGR    +  G     C++  T   +        YLGR W  + + V   ++++ V+NP+GW E        T+FY EY+  G G+    RV + T  +  N  E   +    +I GSTWL
Sbjct:  174 QALAMRINADKAAFYSCRFHGFQDTLCDDKG-NHFFKDCYIEGTYDFIFGRGASLYLNTQLHA---VGDGLRVITAQGRQSATEQNGYTFVHCKVTGTGTGI--------YLGRSWMSHPKVVYAFTEMTSVVNPSGWRENLNRGYDKTVFYGEYKCFGPGSHLEKRVPY-TQDIDKN--EVTPFLTLGYIKGSTWL 355          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME_ASPAC (Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.073e-18
Identity = 60/165 (36.36%), Postives = 84/165 (50.91%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFG-NAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFA-LDTLFYAEYQNTGAGAD 490
            QA+AL   +D   +Y C+       L   T   Q Y +  I G VDFIFG +A A  QN DI      P   + +TA GR      +  VI K  + A       +G++  YLGRPW  Y+R V  Q+ +++VIN  GW EWS +    + + + EY NTGAG++
Sbjct:  139 QALALSAWADQQGYYGCNFTGYQDTLLAQTG-NQLYINSYIEGAVDFIFGQHARAWFQNVDIRVVE-GPTSAS-ITANGRSSETDTSYYVINKSTVAAKEGDDVAEGTY--YLGRPWSEYARVVFQQTSMTNVINSLGWTEWSTSTPNTEYVTFGEYANTGAGSE 298          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME49_ARATH (Probable pectinesterase 49 OS=Arabidopsis thaliana GN=PME49 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.084e-18
Identity = 59/197 (29.95%), Postives = 88/197 (44.67%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWL 592
            QA+A+R+  D +AFY C        L        F+ +C I GT DFIFG  A++     +HA         ++ A  R    +  G     C++      +        YLGR W  + + V   +++S V+NP+GW E        T+FY EY  TG G+  + RV  +  + I N  EA  +    +I GS WL
Sbjct:  174 QALAMRINGDKAAFYNCRFYGFQDTLCDDRG-NHFFKNCYIEGTYDFIFGRGASLYLTTQLHAVGDG---LRVIAAHNRQSTTEQNGYSFVHCKVTGVGTGI--------YLGRAWMSHPKVVYSYTEMSSVVNPSGWQENRVRAHDKTVFYGEYMCTGPGSHKAKRVAHT--QDIDN-KEASQFLTLGYIKGSKWL 355          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME63_ARATH (Putative pectinesterase 63 OS=Arabidopsis thaliana GN=PME63 PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17
Identity = 55/197 (27.92%), Postives = 92/197 (46.70%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWL 592
            QA+++R+  + +AFY C        +   T    F+  C I GT DFIFG+  ++     ++          ++TA       + +G     C++  T   +        YLGR W  + + V   +D+S V+NP+GW E        T+FY EY+ TG G+    RVK++      +  EA+ + +  +I GS+WL
Sbjct:  151 QALSMRISGNKAAFYNCKFYGYQDTICDDTG-NHFFKDCYIEGTFDFIFGSGRSLYLGTQLNVVGDGIR---VITAHAGKSAAEKSGYSFVHCKVTGTGTGI--------YLGRSWMSHPKVVYAYTDMSSVVNPSGWQENREAGRDKTVFYGEYKCTGTGSHKEKRVKYTQ---DIDDIEAKYFISLGYIQGSSWL 332          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME_ASPTU (Pectinesterase OS=Aspergillus tubingensis GN=pme1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17
Identity = 56/165 (33.94%), Postives = 81/165 (49.09%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFG-NAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFA-LDTLFYAEYQNTGAGAD 490
            QA+A+   +    +Y C        L   T   Q Y    I G VDFIFG +A A    CDI      P+  + +TA GR   + ++  VI K  + A        G++  YLGRPW +Y+R    ++ ++DVIN  GW EWS +    + + + EY NTG GA+
Sbjct:  138 QALAVSAYASEQGYYACQFTGYQDTLLAETGY-QVYAGTYIEGAVDFIFGQHARAWFHECDIRVLE-GPSSAS-ITANGRSSESDDSYYVIHKSTVAAADGNDVSSGTY--YLGRPWSQYARVCFQKTSMTDVINHLGWTEWSTSTPNTENVTFVEYGNTGTGAE 297          
The following BLAST results are available for this feature:
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
PME55_ARATH7.181e-2336.26Probable pectinesterase 55 OS=Arabidopsis thaliana... [more]
PME10_ARATH9.379e-2335.59Putative pectinesterase 10 OS=Arabidopsis thaliana... [more]
PME29_ARATH4.655e-2232.84Probable pectinesterase 29 OS=Arabidopsis thaliana... [more]
PME67_ARATH1.769e-2132.34Probable pectinesterase 67 OS=Arabidopsis thaliana... [more]
PME31_ARATH3.940e-2134.50Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31... [more]
PME50_ARATH3.336e-2031.47Probable pectinesterase 50 OS=Arabidopsis thaliana... [more]
PME_ASPAC1.073e-1836.36Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE... [more]
PME49_ARATH9.084e-1829.95Probable pectinesterase 49 OS=Arabidopsis thaliana... [more]
PME63_ARATH3.452e-1727.92Putative pectinesterase 63 OS=Arabidopsis thaliana... [more]
PME_ASPTU7.690e-1733.94Pectinesterase OS=Aspergillus tubingensis GN=pme1 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00755 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00755 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623664 ID=BQ623664; Name=BQ623664; organism=Citrus sinensis; type=EST; length=691bp
TCAAGCCGTGGCACTGAGAGTAGGATCAGATTTATCAGCATTCTATAGGT
GTGACATGCCTAGCATACCAAGACACCTCTCTATGTACACCTCACTTCGC
CAATTTTATACCAGCTGCATTATAGCAGGCACAGTGGACTTCATTTTCGG
AAATGCAGCAGCTGTGTTGCAAAACTGTGACATCCATGCTCGCCGCCCCA
ATCCAAACCAAAGGAACATGGTCACGGCACAAGGCCGCGACGACCCGAAT
CAGAACACAGGCATAGTGATACAAAAATGCAGGATTGGTGCAACATCAGA
TTTACTTGCTGTAAAGGGCAGCTTTGAGACATATTTAGGCAGGCCATGGA
AGCGGTACTCGAGGACTGTTGTGATGCAATCTGATATAAGTGATGTTATT
AACCCAGCTGGGTGGTATGAATGGAGTGGGAATTTTGCATTGGACACATT
GTTTTATGCAGAGTATCAAAACACAGGTGCTGGTGCTGACACATCGAATA
GGGTGAAATGGAGCACATTCAAGGTGATTACTAATGCAGCTGAGGCTCAA
ACTTATACAGCTGCGAATTTTATTGCAGGGAGTACTTGGCTTGGCTCCAC
TGGGTTTCCTTTCTCTCTTGGTCTGTGAATTTGTCATACATAGGCCATAG
CTAAGCTCAGCTGCCTATAAATGTCCTAGCTAGCATACATA
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