BQ623664

Overview
NameBQ623664
Unique NameBQ623664
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME66_ARATH (Probable pectinesterase 66 OS=Arabidopsis thaliana GN=PME66 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17
Identity = 57/178 (32.02%), Postives = 82/178 (46.07%), Query Frame = 2
Query:   98 RQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARR---PNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGSTGFPFSLG 622
            R +Y  CII+G +DFIFG   ++ + C ++         N    +TA  R  P+   G V   C          V G  +T LGR W   +R +  +S +SDV+ P GW  W        L + E   TGAGADTS RV W   K + + +E   + + +FI    W+  + FP   G
Sbjct:  172 RHYYKRCIISGGIDFIFGYGQSLFKECTLNMTLGIYAPDNPYGTITAHQRPSPSDEGGFVFSDC---------TVTGVGKTLLGRAWGSNARVIFDRSRLSDVVLPIGWDAWRAKGNERDLTFVEAGCTGAGADTSQRVPW--LKKL-SLSEVDGFASVSFIDQDGWI--SRFPIEGG 335          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PPME1_ARATH (Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PPME1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16
Identity = 51/197 (25.89%), Postives = 87/197 (44.16%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWL 592
            QA+++R+  + +AFY C        +   T    F+  C + GT DFIFG+  ++     +H          ++ A       + +G     C++  T   +        YLGR W  + + V   ++++ V+NP GW E        T+FY EY+ +G G+  + RV    F    +  EA  + +  +I GS WL
Sbjct:  174 QALSMRISGNFAAFYNCKFYGFQDTICDDTG-NHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVGDGIR---VIAAHAGKSAEEKSGYSFVHCKVTGTGGGI--------YLGRAWMSHPKVVYAYTEMTSVVNPTGWQENKTPAHDKTVFYGEYKCSGPGSHKAKRV---PFTQDIDDKEANRFLSLGYIQGSKWL 355          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME48_ARATH (Probable pectinesterase 48 OS=Arabidopsis thaliana GN=PME48 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16
Identity = 51/197 (25.89%), Postives = 87/197 (44.16%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWL 592
            QA+++R+  + +AFY C        +   T    F+  C + GT DFIFG+  ++     +H          ++ A       + +G     C++  T   +        YLGR W  + + V   ++++ V+NP GW E        T+FY EY+ +G G+  + RV    F    +  EA  + +  +I GS WL
Sbjct:  174 QALSMRISGNFAAFYNCKFYGFQDTICDDTG-NHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVGDGIR---VIAAHAGKSAEEKSGYSFVHCKVTGTGGGI--------YLGRAWMSHPKVVYAYTEMTSVVNPTGWQENKTPAHDKTVFYGEYKCSGPGSHKAKRV---PFTQDIDDKEANCFLSLGYIQGSKWL 355          
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.110e-15
Identity = 54/198 (27.27%), Postives = 87/198 (43.94%), Query Frame = 2
Query:    2 QAVALRVGSDLSAFYRCDMPSIPRHLSMYTSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWS-GNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWL 592
            QAVA R+  D + F  C        L      R ++  C I G++DFIFGN  ++ ++C++H+     ++   + A GR  P + TG     CR+  T  L         Y+GR   +YSR V   +    ++   GW +W   +    T F+  Y   G GA  +  V W+      +   A  + A +F+ G  W+
Sbjct:  176 QAVAFRISGDKAFFSGCGFYGAQDTLCDDAG-RHYFKECYIEGSIDFIFGNGRSMYKDCELHS---IASRFGSIAAHGRTCPEEKTGFAFVGCRVTGTGPL---------YVGRAMGQYSRIVYAYTYFDALVAHGGWDDWDHKSNKSKTAFFGVYNCYGPGAAATRGVSWAR---ALDYESAHPFIAKSFVNGRHWI 357          
The following BLAST results are available for this feature:
BLAST of BQ623664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
PME66_ARATH7.690e-1732.02Probable pectinesterase 66 OS=Arabidopsis thaliana... [more]
PPME1_ARATH6.510e-1625.89Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PP... [more]
PME48_ARATH6.510e-1625.89Probable pectinesterase 48 OS=Arabidopsis thaliana... [more]
PME68_ARATH1.110e-1527.27Probable pectinesterase 68 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00755 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00755 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623664 ID=BQ623664; Name=BQ623664; organism=Citrus sinensis; type=EST; length=691bp
TCAAGCCGTGGCACTGAGAGTAGGATCAGATTTATCAGCATTCTATAGGT
GTGACATGCCTAGCATACCAAGACACCTCTCTATGTACACCTCACTTCGC
CAATTTTATACCAGCTGCATTATAGCAGGCACAGTGGACTTCATTTTCGG
AAATGCAGCAGCTGTGTTGCAAAACTGTGACATCCATGCTCGCCGCCCCA
ATCCAAACCAAAGGAACATGGTCACGGCACAAGGCCGCGACGACCCGAAT
CAGAACACAGGCATAGTGATACAAAAATGCAGGATTGGTGCAACATCAGA
TTTACTTGCTGTAAAGGGCAGCTTTGAGACATATTTAGGCAGGCCATGGA
AGCGGTACTCGAGGACTGTTGTGATGCAATCTGATATAAGTGATGTTATT
AACCCAGCTGGGTGGTATGAATGGAGTGGGAATTTTGCATTGGACACATT
GTTTTATGCAGAGTATCAAAACACAGGTGCTGGTGCTGACACATCGAATA
GGGTGAAATGGAGCACATTCAAGGTGATTACTAATGCAGCTGAGGCTCAA
ACTTATACAGCTGCGAATTTTATTGCAGGGAGTACTTGGCTTGGCTCCAC
TGGGTTTCCTTTCTCTCTTGGTCTGTGAATTTGTCATACATAGGCCATAG
CTAAGCTCAGCTGCCTATAAATGTCCTAGCTAGCATACATA
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