BQ623666
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623666 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.038e-13 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 1 Query: 124 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 348 Y GGS DP +D ++ + K+K +KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN Sbjct: 191 YPGGSFDPL----------GLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 255
BLAST of BQ623666 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.038e-13 Identity = 38/75 (50.67%), Postives = 48/75 (64.00%), Query Frame = 1 Query: 124 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 348 Y GGS DP +D + + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN Sbjct: 188 YPGGSFDPL----------GLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 252
BLAST of BQ623666 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 1.038e-13 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 1 Query: 124 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 348 Y GG+ DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN Sbjct: 189 YPGGAFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 253
BLAST of BQ623666 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.355e-13 Identity = 49/112 (43.75%), Postives = 59/112 (52.68%), Query Frame = 1 Query: 25 LEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTS 360 +++ LMG AE R AN GS G L Y GG DP D + + K+KE+KNGRLAM + LG+FVQ +VTG GP QNL DHLADP N S Sbjct: 149 VQVVLMGLAEAYR----ANGGSEGFLDDLD-TLYPGGPFDPL----------GLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFAS 245
BLAST of BQ623666 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.355e-13 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 1 Query: 124 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 348 Y GGS DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLA+PVNNN Sbjct: 169 YPGGSFDPL----------ALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNN 233
BLAST of BQ623666 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.355e-13 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 1 Query: 124 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 348 Y GGS DP D ++ + ++KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPVNNN Sbjct: 190 YPGGSFDPL----------GLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 254
BLAST of BQ623666 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.355e-13 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 1 Query: 124 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 348 Y GGS DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPVNNN Sbjct: 186 YPGGSFDPL----------GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNN 250
BLAST of BQ623666 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 1.355e-13 Identity = 45/112 (40.18%), Postives = 61/112 (54.46%), Query Frame = 1 Query: 16 LFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 348 ++ ++ LMGF E R G +G G + Y GG+ DP D + + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPV NN Sbjct: 160 IWACQVVLMGFVEGYR----VGGGPLGE----GLDPIYPGGAFDPL----------GLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANN 253
BLAST of BQ623666 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.355e-13 Identity = 46/112 (41.07%), Postives = 61/112 (54.46%), Query Frame = 1 Query: 16 LFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 348 ++ ++ LMGF E R G +G G + Y GG+ DP D S + K+KE+KNGRLAM ++ G+FVQ +VTG GP QNL DH+ADPV NN Sbjct: 160 IWATQVVLMGFVEGYR----VGGGPLGE----GLDPLYPGGAFDPL----------GLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANN 253
BLAST of BQ623666 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.355e-13 Identity = 46/127 (36.22%), Postives = 61/127 (48.03%), Query Frame = 1 Query: 4 DPYTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLG----------------GSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADP 336 D TLF++E+ L+G+AE RR+ D PG + K G GSG PA +K+ + KE+KNGRLAMLA++G + Q + TG GP NL HLADP Sbjct: 149 DTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPA-----------------KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258 The following BLAST results are available for this feature:
BLAST of BQ623666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623666 ID=BQ623666; Name=BQ623666; organism=Citrus sinensis; type=EST; length=437bpback to top |