BQ623666
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623666 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.147e-12 Identity = 43/112 (38.39%), Postives = 61/112 (54.46%), Query Frame = 1 Query: 16 LFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 348 ++ ++ LMG E R G +G G + Y GG+ DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DH+ADPV NN Sbjct: 159 IWATQVVLMGLIEGYR----VGGGPLGE----GLDPLYPGGAFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVANN 252
BLAST of BQ623666 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.498e-12 Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 193 DEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 348 D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADPV NN Sbjct: 87 DPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANN 138
BLAST of BQ623666 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.498e-12 Identity = 35/75 (46.67%), Postives = 48/75 (64.00%), Query Frame = 1 Query: 124 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 348 Y GGS DP + ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP ++L DH+ADPVNNN Sbjct: 190 YPGGSFDPL----------GLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNN 254
BLAST of BQ623666 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.556e-12 Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 1 Query: 133 GSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 348 G G+ Y D + + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NLLDHL +PV NN Sbjct: 182 GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 253
BLAST of BQ623666 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.556e-12 Identity = 33/72 (45.83%), Postives = 43/72 (59.72%), Query Frame = 1 Query: 133 GSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 348 G G+ Y D + + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHL DPV NN Sbjct: 185 GEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANN 256
BLAST of BQ623666 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.556e-12 Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 1 Query: 124 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 348 Y GGS DP + ++ + K+KE+KNGRLAM ++ G+FV +VTG GP +NL DHLADPVNNN Sbjct: 152 YPGGSFDPL----------GLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNNN 216
BLAST of BQ623666 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.338e-12 Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 1 Query: 193 DEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 348 D + + K+KE+KNGRLAM A LG+FVQ +VTG GP +NL DHLA+P NN Sbjct: 211 DPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENN 262
BLAST of BQ623666 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.338e-12 Identity = 36/75 (48.00%), Postives = 46/75 (61.33%), Query Frame = 1 Query: 124 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNN 348 Y GGS DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VTG GP +NL DHLADP NN Sbjct: 189 YPGGSFDPL----------GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNN 253
BLAST of BQ623666 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.359e-12 Identity = 31/56 (55.36%), Postives = 39/56 (69.64%), Query Frame = 1 Query: 193 DEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTS 360 D + + K+KE+KNGRLAM + G+FVQ +VTG GP QNL DHLADP NN + Sbjct: 193 DPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAA 248
BLAST of BQ623666 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.656e-11 Identity = 41/114 (35.96%), Postives = 59/114 (51.75%), Query Frame = 1 Query: 13 TLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFV-QGLVTGVGPYQNLLDHLADPVNNNV 351 T+ +E + F EH+R + + +KY GG+ DP KD ++ K+KE+KNGRLA+LAI+G+ V Q G GP +NL HLADP +NN+ Sbjct: 141 TILAIEFLAIAFVEHQRSMEKDSEK----------KKYPGGAFDPL----------GYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNNI 234 The following BLAST results are available for this feature:
BLAST of BQ623666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623666 ID=BQ623666; Name=BQ623666; organism=Citrus sinensis; type=EST; length=437bpback to top |