BQ623668
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623668 vs. ExPASy Swiss-Prot
Match: IF5A1_NICPL (Eukaryotic translation initiation factor 5A-1 OS=Nicotiana plumbaginifolia GN=EIF-5A1 PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 3.886e-54 Identity = 104/133 (78.20%), Postives = 112/133 (84.21%), Query Frame = 2 Query: 2 RKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGEGLGFDCHVFNGVRSRSVPLKDIGPK 400 RKNG+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHN DVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD+ LL +KDGFAEG+ L G + +KD+GPK Sbjct: 28 RKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLALIKDGFAEGKDLVLSVMSAMG-EEQICGIKDVGPK 159
BLAST of BQ623668 vs. ExPASy Swiss-Prot
Match: IF5A4_SOLLC (Eukaryotic translation initiation factor 5A-4 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 6.629e-54 Identity = 105/134 (78.36%), Postives = 112/134 (83.58%), Query Frame = 2 Query: 2 RKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGEGLGFDCHVFNGVRSRSVPLKDIGPKS 403 RKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLEDIVPSSHN DVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD+TLL Q+K GF EG+ L G + +KDIG K+ Sbjct: 28 RKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDTLLNQVKGGFEEGKDLVLSVMSAMG-EEQICAVKDIGTKT 160
BLAST of BQ623668 vs. ExPASy Swiss-Prot
Match: IF5A1_SOLTU (Eukaryotic translation initiation factor 5A-1/2 OS=Solanum tuberosum GN=EIF5A1 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 8.658e-54 Identity = 105/134 (78.36%), Postives = 112/134 (83.58%), Query Frame = 2 Query: 2 RKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGEGLGFDCHVFNGVRSRSVPLKDIGPKS 403 RK+GYIVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHN DVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD+ LL Q+K GF EG+ L G + +KDIG KS Sbjct: 28 RKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDALLNQVKGGFEEGKDLVLSVMSAMG-EEQICAVKDIGTKS 160
BLAST of BQ623668 vs. ExPASy Swiss-Prot
Match: IF5A_SENVE (Eukaryotic translation initiation factor 5A OS=Senecio vernalis GN=EIFSV1 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 1.929e-53 Identity = 104/133 (78.20%), Postives = 111/133 (83.46%), Query Frame = 2 Query: 2 RKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGEGLGFDCHVFNGVRSRSVPLKDIGPK 400 RK G+IVIK R CKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHN DVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDL+LPTD+ LLTQ+KDGF EG+ L G + LKDIGPK Sbjct: 28 RKGGHIVIKNRACKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTDDALLTQIKDGFGEGKDLVVSVMSAMG-EEQICALKDIGPK 159
BLAST of BQ623668 vs. ExPASy Swiss-Prot
Match: IF5A_MAIZE (Eukaryotic translation initiation factor 5A OS=Zea mays GN=TIF5A PE=1 SV=2) HSP 1 Score: 204.912 bits (520), Expect = 1.250e-52 Identity = 100/133 (75.19%), Postives = 111/133 (83.46%), Query Frame = 2 Query: 2 RKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGEGLGFDCHVFNGVRSRSVPLKDIGPK 400 RKNG+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHN D+PHVNRT+YQLIDISEDGFVSLLT +GNTKDDLRLPTDETL+ Q+K+GF G+ L G + LKD+GPK Sbjct: 29 RKNGFIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDIPHVNRTEYQLIDISEDGFVSLLTSDGNTKDDLRLPTDETLVAQIKEGFESGKDLVVTVQSAMG-EEQICALKDVGPK 160
BLAST of BQ623668 vs. ExPASy Swiss-Prot
Match: IF5A1_MEDSA (Eukaryotic translation initiation factor 5A-1 OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 1.250e-52 Identity = 104/135 (77.04%), Postives = 114/135 (84.44%), Query Frame = 2 Query: 2 RKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDI-VPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGEGLGFDCHVFNGVRSRSVPLKDIGPKS 403 RKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLE++ VPSSHN DVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDL+LPTD++LLTQ+KDGFAEG+ L G + LKDIG K+ Sbjct: 28 RKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEEVYVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTDDSLLTQIKDGFAEGKDLVVSVMSAMG-EEQICALKDIGGKN 161
BLAST of BQ623668 vs. ExPASy Swiss-Prot
Match: IF5A3_ARATH (Eukaryotic translation initiation factor 5A-3 OS=Arabidopsis thaliana GN=At1g69410 PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 4.751e-52 Identity = 100/133 (75.19%), Postives = 111/133 (83.46%), Query Frame = 2 Query: 2 RKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGEGLGFDCHVFNGVRSRSVPLKDIGPK 400 RK G+IVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLEDIVPSSHN DVPHVNR DYQLIDISEDGFVSLLT+NG+TKDDL+LPTDE LLTQLK+GF EG+ + G + LK++GPK Sbjct: 27 RKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDEALLTQLKNGFEEGKDIVVSVMSAMG-EEQMCALKEVGPK 158
BLAST of BQ623668 vs. ExPASy Swiss-Prot
Match: IF5A1_ARATH (Eukaryotic translation initiation factor 5A-1 OS=Arabidopsis thaliana GN=At1g13950 PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 1.382e-51 Identity = 100/134 (74.63%), Postives = 112/134 (83.58%), Query Frame = 2 Query: 2 RKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGEGLGFDCHVFNGVRSRSV-PLKDIGPK 400 RKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLEDIVPSSHN DVPHVNRTDYQLIDISEDG+VSLLT+NG+TKDDL+LP D+TLL Q+K GF +G+ L V + + + LKDIGPK Sbjct: 27 RKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPNDDTLLQQIKSGFDDGKDLVVS--VMSAMGEEQINALKDIGPK 158
BLAST of BQ623668 vs. ExPASy Swiss-Prot
Match: IF5A_DIACA (Eukaryotic translation initiation factor 5A OS=Dianthus caryophyllus PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 3.657e-48 Identity = 87/110 (79.09%), Postives = 100/110 (90.91%), Query Frame = 2 Query: 2 RKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGEGL 331 RK+G+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHN DVPHVNR DYQL+DI+EDGFVSLLT++G+TKDDL+LP DE L+ Q+K+GF G+ L Sbjct: 28 RKSGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRVDYQLLDITEDGFVSLLTDSGDTKDDLKLPADEALVKQMKEGFEAGKDL 137 HSP 2 Score: 23.483 bits (49), Expect = 3.657e-48 Identity = 9/13 (69.23%), Postives = 12/13 (92.31%), Query Frame = 3 Query: 321 GKDLVLTVMSSMG 359 GKDL+L+VM +MG Sbjct: 134 GKDLILSVMCAMG 146
BLAST of BQ623668 vs. ExPASy Swiss-Prot
Match: IF5A2_ARATH (Eukaryotic translation initiation factor 5A-2 OS=Arabidopsis thaliana GN=At1g26630 PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 3.970e-47 Identity = 86/110 (78.18%), Postives = 97/110 (88.18%), Query Frame = 2 Query: 2 RKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGEGL 331 RK G+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLEDIVPSSHN DVPHVNR DYQLIDI+EDGFVSLLT++G TKDDL+LPTD+ L Q++ GF EG+ + Sbjct: 27 RKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTDDGLTAQMRLGFDEGKDI 136 HSP 2 Score: 25.0238 bits (53), Expect = 3.970e-47 Identity = 10/13 (76.92%), Postives = 13/13 (100.00%), Query Frame = 3 Query: 321 GKDLVLTVMSSMG 359 GKD+V++VMSSMG Sbjct: 133 GKDIVVSVMSSMG 145 The following BLAST results are available for this feature:
BLAST of BQ623668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623668 ID=BQ623668; Name=BQ623668; organism=Citrus sinensis; type=EST; length=449bpback to top |