BQ623668
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623668 vs. ExPASy Swiss-Prot
Match: IF5A2_CAEEL (Eukaryotic translation initiation factor 5A-2 OS=Caenorhabditis elegans GN=iff-2 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 5.651e-29 Identity = 65/110 (59.09%), Postives = 83/110 (75.45%), Query Frame = 2 Query: 2 RKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLL-TENGNTKDDLRLPTDETLLTQLKDGFAEGEG 328 RKN +++IKGRPCK+VE+STSKTGKHGHAK H V IDIF+ KKLEDI PS+HN DVP V R +Y L+ I +DG+ SL+ E+ KDDL+LP D L Q++D + + EG Sbjct: 30 RKNEHVMIKGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTSKKLEDICPSTHNMDVPVVKRREYLLMAI-DDGYCSLMDPESCEQKDDLKLP-DTELGQQIRDAYEKDEG 137
BLAST of BQ623668 vs. ExPASy Swiss-Prot
Match: IF5A_DICDI (Eukaryotic translation initiation factor 5A OS=Dictyostelium discoideum GN=eif5a PE=1 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 9.639e-29 Identity = 59/106 (55.66%), Postives = 81/106 (76.42%), Query Frame = 2 Query: 2 RKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDE---TLLTQLKDG 310 RKNG++VIKG PCK+V++STSKTGKHGHAK + IDIF+GKK E+I PS+HN DVP+V+R +Y ++D+ +DG++SLL G K+DL LP D+ + LK+G Sbjct: 31 RKNGFVVIKGFPCKIVDMSTSKTGKHGHAKVNITAIDIFTGKKYEEICPSTHNIDVPNVSRKEYTVMDV-QDGYLSLLDAGGEVKEDLALPEDDIGKEITQMLKEG 135
BLAST of BQ623668 vs. ExPASy Swiss-Prot
Match: IF5A1_CAEEL (Eukaryotic translation initiation factor 5A-1 OS=Caenorhabditis elegans GN=iff-1 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 4.050e-27 Identity = 62/110 (56.36%), Postives = 81/110 (73.64%), Query Frame = 2 Query: 2 RKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLL-TENGNTKDDLRLPTDETLLTQLKDGFAEGEG 328 RKN +++I+GRPCK+VE+STSKTGKHGHAK H V IDIF+ KKLEDI PS+HN DVP V R +Y L+ I EDGF SL+ E+ KDDL++P + L +++ + EG Sbjct: 30 RKNEHVMIRGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTTKKLEDICPSTHNMDVPVVKRREYILMSI-EDGFCSLMDPESCELKDDLKMPEGD-LGNTIREALEKDEG 137
BLAST of BQ623668 vs. ExPASy Swiss-Prot
Match: IF5A_THEPD (Translation initiation factor 5A OS=Thermofilum pendens (strain Hrk 5) GN=eIF5A PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 9.684e-13 Identity = 38/99 (38.38%), Postives = 56/99 (56.57%), Query Frame = 2 Query: 14 YIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDG 310 +IVI G PCKVVEV SKTGKHG AK VGI F G K +VP+ +VP + + Q++ D V L+ + ++ +P +E + ++L +G Sbjct: 16 FIVIDGEPCKVVEVEKSKTGKHGSAKARIVGIGFFDGGKRSIVVPTDARVEVPIIKKFTAQVVAFVGDN-VQLMNLEDYSTFEIPMPQEEEIKSKLSEG 113
BLAST of BQ623668 vs. ExPASy Swiss-Prot
Match: IF5A_SULTO (Translation initiation factor 5A OS=Sulfolobus tokodaii GN=eif5a PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.806e-12 Identity = 36/99 (36.36%), Postives = 57/99 (57.58%), Query Frame = 2 Query: 14 YIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDG 310 Y+VI G PC+VVE+S +KTGKHG AK + V I +F+G+K + P +VP + + Q++ D + EN T D+ PTD ++ +++ G Sbjct: 16 YVVIDGEPCRVVEISKAKTGKHGSAKANIVAIGLFTGQKRTLMAPVDQQVEVPIIEKHIGQILADKGDTITIMDMENYET-FDIEKPTDADIVDKIRPG 113
BLAST of BQ623668 vs. ExPASy Swiss-Prot
Match: IF5A_IGNH4 (Translation initiation factor 5A OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=eIF5A PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 8.198e-12 Identity = 37/103 (35.92%), Postives = 58/103 (56.31%), Query Frame = 2 Query: 2 RKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDG 310 + +I+I G PCK+VE+S +KTGKHG AK H V I + SG K + P +VP + + Q++ I+ D V L+ ++ LP +E L ++L+ G Sbjct: 12 KPGNFIMIDGEPCKIVEMSKAKTGKHGSAKAHVVAISLISGAKKTFVAPVDTRVEVPIIEKRVGQVLAITGDS-VQLMDMETYDTFEVPLPEEEELKSRLEPG 113
BLAST of BQ623668 vs. ExPASy Swiss-Prot
Match: IF5A_STAMF (Translation initiation factor 5A OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=eIF5A PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.385e-11 Identity = 37/103 (35.92%), Postives = 56/103 (54.37%), Query Frame = 2 Query: 2 RKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDG 310 + +I+I G PC++VE+S +KTGKHG AK H V I +F+G K + P +VP + + Q+I D + E T ++ P+DE L +LK G Sbjct: 12 KPGNFIIIDGEPCRIVEMSKAKTGKHGSAKAHVVAIGLFTGNKKTLVAPVDQRVEVPVIEKRVGQIIADMGDLLQVMDMETFET-FEVEKPSDEKLREKLKPG 113
BLAST of BQ623668 vs. ExPASy Swiss-Prot
Match: YE034_YEAST (Putative uncharacterized protein YEL034C-A OS=Saccharomyces cerevisiae GN=YEL034C-A PE=5 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 4.069e-11 Identity = 35/91 (38.46%), Postives = 55/91 (60.44%), Query Frame = -2 Query: 2 WEPQIILGVPIFSQQTHKSILRNINQLIVGTVDMGNIRVMRRGDNIFQLLSTEDINSNKVALSMTVLSSLGGGDFHNLAGTAFDDDVAILT 274 W IIL V + Q ++++ N+ QL+ ++D N V+ R IFQLL++EDIN N++ S+TVL+SL G NL + DD+ +L+ Sbjct: 65 WSLDIILSVTVHVHQRQETVI-NVQQLVFVSLDNWNFHVVSRWRQIFQLLTSEDINGNQMDFSVTVLTSLRSGHVDNLTWSTLDDNETVLS 154
BLAST of BQ623668 vs. ExPASy Swiss-Prot
Match: IF5A_SULAC (Translation initiation factor 5A OS=Sulfolobus acidocaldarius GN=eif5a PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 4.069e-11 Identity = 33/99 (33.33%), Postives = 58/99 (58.59%), Query Frame = 2 Query: 14 YIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDG 310 Y++I G PC+VVE++ +KTGKHG AK + V I +F+G+K + P +VP + + Q++ D + E+ T DL PT+ ++++++ G Sbjct: 16 YVMIDGEPCRVVEITKAKTGKHGSAKANVVAIGLFTGQKRSLMAPVDQQVEVPIIEKHVGQILADKGDNLTIMDLESYET-FDLEKPTENEIVSKIRPG 113
BLAST of BQ623668 vs. ExPASy Swiss-Prot
Match: IF5A_METKA (Translation initiation factor 5A OS=Methanopyrus kandleri GN=eif5a PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.069e-11 Identity = 38/103 (36.89%), Postives = 53/103 (51.46%), Query Frame = 2 Query: 2 RKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDG 310 +K YI+I PCK+VE +TS GKHG AK V + +F GKK P DVP + R Q++ D V L+ +++ P DE L +QL+ G Sbjct: 14 KKGKYIMIDDEPCKIVEYTTSSPGKHGSAKARIVAVGLFDGKKRTLTKPVDAKVDVPVIERKTAQVVSDMGD-TVQLMDMETYETFEVQKPEDEELASQLEPG 115 The following BLAST results are available for this feature:
BLAST of BQ623668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623668 ID=BQ623668; Name=BQ623668; organism=Citrus sinensis; type=EST; length=449bpback to top |