BQ623671
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623671 vs. ExPASy Swiss-Prot
Match: ODBB_PSEAE (2-oxoisovalerate dehydrogenase subunit beta OS=Pseudomonas aeruginosa GN=bkdA2 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.245e-23 Identity = 67/166 (40.36%), Postives = 97/166 (58.43%), Query Frame = 2 Query: 11 DARGLLKAAIRDPDPVVFLENELLYGESF------PVS-------AEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYA 469 DA+GLL A I + DPV+FLE + LY F PV+ ++V D + +P+ KA I R G +T+ + +V ++ AA+ + G+ AE+I+LRS+ PLD TI ASV+KT R V E G GAE+ + V E F +L+AP+ER+ G D P P+A Sbjct: 166 DAKGLLIACIENDDPVIFLEPKRLYNGPFDGHHDRPVTPWSKHPASQVPDGYYKVPLDKAAIVRPGAALTVLTYGTMVYVAQAAAD---ETGLDAEIIDLRSLWPLDLETIVASVKKTGRCVIAHEATRTCGFGAELMSLVQEHCFHHLEAPIERVTGWDTPYPHA 328
BLAST of BQ623671 vs. ExPASy Swiss-Prot
Match: ODBB_HUMAN (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Homo sapiens GN=BCKDHB PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.424e-19 Identity = 60/153 (39.22%), Postives = 91/153 (59.48%), Query Frame = 2 Query: 14 ARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKE--GISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPY 466 A+GLL + I D +P +F E ++LY + + EV + +P+ +A++ +EG DVT+ A+ V + + A +AKE G+S EVI+LR+I P D TI SV KT RL+ E G +EI ++V EE F L+AP+ R+ G D P P+ Sbjct: 221 AKGLLLSCIEDKNPCIFFEPKILYRAA---AEEVPIEPYNIPLSQAEVIQEGSDVTLVAWGTQVHVIREVAS-MAKEKLGVSCEVIDLRTIIPWDVDTICKSVIKTGRLLISHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDTPFPH 369
BLAST of BQ623671 vs. ExPASy Swiss-Prot
Match: ODPB_MYCGE (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma genitalium GN=pdhB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.412e-19 Identity = 58/155 (37.42%), Postives = 87/155 (56.13%), Query Frame = 2 Query: 11 DARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVG--LSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYA 469 D +GL AAI PDPV+F E + LY E+ + +PIG+A + EG ++TI ++ + ++L + L +GI E+I+LR+I P D+ T+ SV+KT RL+ V E AEI SV EE F+YL +R+ G D+ +P A Sbjct: 155 DTKGLFLAAIESPDPVIFFEPKKLYRA---FRQEIPSDYYTVPIGEANLISEGSELTIVSYGPTMFDLINLVYSGELKDKGI--ELIDLRTISPWDKQTVFNSVKKTGRLLVVTEAVKSFTTSAEIITSVTEELFTYLKKAPQRVTGFDIVVPLA 304
BLAST of BQ623671 vs. ExPASy Swiss-Prot
Match: ODBB_BOVIN (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Bos taurus GN=BCKDHB PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 9.231e-19 Identity = 55/152 (36.18%), Postives = 89/152 (58.55%), Query Frame = 2 Query: 14 ARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKE-GISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPY 466 A+GLL + I D +P +F E ++LY + +V + +P+ +A++ +EG DVT+ A+ V + + A + ++ G+S EVI+LR+I P D T+ SV KT RL+ E G +EI ++V EE F L+AP+ R+ G D P P+ Sbjct: 221 AKGLLLSCIEDKNPCIFFEPKILYRAAVE---QVPVEPYNIPLSQAEVIQEGSDVTLVAWGTQVHVIREVAAMAQEKLGVSCEVIDLRTILPWDVDTVCKSVIKTGRLLVSHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDTPFPH 369
BLAST of BQ623671 vs. ExPASy Swiss-Prot
Match: ODBB_RAT (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Rattus norvegicus GN=Bckdhb PE=1 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 1.206e-18 Identity = 55/152 (36.18%), Postives = 89/152 (58.55%), Query Frame = 2 Query: 14 ARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKE-GISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPY 466 A+GLL + I D +P +F E ++LY + +V + +P+ +A++ +EG DVT+ A+ V + + A + ++ G+S EVI+LR+I P D T+ SV KT RL+ E G +EI ++V EE F L+AP+ R+ G D P P+ Sbjct: 219 AKGLLLSCIEDKNPCIFFEPKILYRAAVE---QVPVEPYKIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAQEKLGVSCEVIDLRTIVPWDVDTVCKSVIKTGRLLISHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDTPFPH 367
BLAST of BQ623671 vs. ExPASy Swiss-Prot
Match: ODBB_MOUSE (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Mus musculus GN=Bckdhb PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.206e-18 Identity = 55/152 (36.18%), Postives = 89/152 (58.55%), Query Frame = 2 Query: 14 ARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKE-GISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPY 466 A+GLL + I D +P +F E ++LY + +V + +P+ +A++ +EG DVT+ A+ V + + A + ++ G+S EVI+LR+I P D T+ SV KT RL+ E G +EI ++V EE F L+AP+ R+ G D P P+ Sbjct: 219 AKGLLLSCIEDKNPCIFFEPKILYRAAVE---QVPVEPYKIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAQEKLGVSCEVIDLRTIVPWDVDTVCKSVIKTGRLLISHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDTPFPH 367
BLAST of BQ623671 vs. ExPASy Swiss-Prot
Match: ODPB_MYCPN (Pyruvate dehydrogenase E1 component subunit beta OS=Mycoplasma pneumoniae GN=pdhB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.575e-18 Identity = 58/155 (37.42%), Postives = 87/155 (56.13%), Query Frame = 2 Query: 11 DARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVG--LSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYA 469 D +GL AA+ PDPVVF E + LY E+ + +PIG+A + +G ++TI ++ + +++ L +GI E+I+LR+I P D+ T+ SV+KT RL+ V E EI ASV EE FSYL A +R+ G D+ +P A Sbjct: 156 DTKGLFLAAVESPDPVVFFEPKKLYRA---FRQEIPADYYTVPIGQANLISQGNNLTIVSYGPTMFDLINMVYGGELKDKGI--ELIDLRTISPWDKETVFNSVKKTGRLLVVTEAAKTFTTSGEIIASVTEELFSYLKAAPQRVTGWDIVVPLA 305
BLAST of BQ623671 vs. ExPASy Swiss-Prot
Match: DXS_DESAP (1-deoxy-D-xylulose-5-phosphate synthase OS=Desulforudis audaxviator (strain MP104C) GN=dxs PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.087e-15 Identity = 49/150 (32.67%), Postives = 78/150 (52.00%), Query Frame = 2 Query: 23 LLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYAA 472 +LK A+ P+ + Y + LPIG+A++ REG D+T+ A +V ++KAAEILA+ GI A V+N R ++PLD I R+T RL+T+EE G G+ + ++ + + D V+ I DV + + A Sbjct: 455 MLKTAVEHEGPIA-----VRYPRGTGTGCALDQDLVALPIGRAEVLREGDDITLIAIGNMVPTAVKAAEILAERGIEASVVNARFVKPLDEKCICHYARRTGRLITLEENVIAGGFGSAVQELLVAKGLT--DVRVQLIGLPDVFIEHGA 597
BLAST of BQ623671 vs. ExPASy Swiss-Prot
Match: DXS_THERP (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=dxs PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.168e-13 Identity = 57/147 (38.78%), Postives = 77/147 (52.38%), Query Frame = 2 Query: 77 LLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFSYLDAPVERIAGADVPMPYA--ANLERMAVPQVEDI 511 L Y V +L LPIG+A++ REG DV I A V + +AA+ILA+ GI A VIN R ++PLDRS I + R+ LVTVEE G G+ + ++ + L PV R+ AD +A A+L R A E I Sbjct: 464 LRYPRGSGVGVPMLGEPRVLPIGRAELLREGSDVAIVALGATVLPAERAADILAERGIRATVINARFVKPLDRSLILDAARECGCLVTVEEAQLAGGFGSAVLETLADAG---LLIPVLRLGLADRFFDHASQASLRRQAGIDAESI 607
BLAST of BQ623671 vs. ExPASy Swiss-Prot
Match: DXS_PELTS (1-deoxy-D-xylulose-5-phosphate synthase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=dxs PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.168e-13 Identity = 44/120 (36.67%), Postives = 67/120 (55.83%), Query Frame = 2 Query: 23 LLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEI 382 +L A+ P P + Y S + DS +P+G+A++ R+G +VT+ A +V L++KAAEILA GI A VIN R ++PLD+ I R+T + T+EE Q G G+ + Sbjct: 456 MLYTALSHPGPAA-----VRYPRSAGTGCRMDDSFKIIPLGRAEVLRDGTEVTLLAVGSMVCLAVKAAEILAGHGIDAAVINARFVKPLDKECILRYARRTREVFTLEENVLQGGFGSAV 570 The following BLAST results are available for this feature:
BLAST of BQ623671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623671 ID=BQ623671; Name=BQ623671; organism=Citrus sinensis; type=EST; length=741bpback to top |