BQ623672
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623672 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.435e-33 Identity = 56/72 (77.78%), Postives = 61/72 (84.72%), Query Frame = 2 Query: 83 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 298 +FD LGLA+D EAFAELKVKE+KNGRLAMFSMFGFFVQAIV+ K LENLADHL VNNNA + TNFVPG Sbjct: 196 SFDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHLGWTVNNNALSNVTNFVPG 267 HSP 2 Score: 51.9878 bits (123), Expect = 1.435e-33 Identity = 23/25 (92.00%), Postives = 24/25 (96.00%), Query Frame = 1 Query: 1 VLMGAVEGYRIAGGPLGEVTDPLYP 75 +LMGAVEGYRIA GPLGEVTDPLYP Sbjct: 170 ILMGAVEGYRIARGPLGEVTDPLYP 194
BLAST of BQ623672 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 7.006e-33 Identity = 63/71 (88.73%), Postives = 64/71 (90.14%), Query Frame = 2 Query: 86 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 298 FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL +PV NNAW YAT FVPG Sbjct: 194 FDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPG 264 HSP 2 Score: 28.1054 bits (61), Expect = 7.006e-33 Identity = 17/26 (65.38%), Postives = 19/26 (73.08%), Query Frame = 1 Query: 1 VLMGAVEGYRIAGGP-LGEVTDPLYP 75 VLMG VEG+RI G P +GE D LYP Sbjct: 165 VLMGLVEGFRINGLPGVGEGND-LYP 189
BLAST of BQ623672 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 2.827e-31 Identity = 62/71 (87.32%), Postives = 63/71 (88.73%), Query Frame = 2 Query: 86 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 298 FDPLGLADDP FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHL DPV NNAW +AT F PG Sbjct: 197 FDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANNAWVFATKFAPG 267 HSP 2 Score: 24.6386 bits (52), Expect = 2.827e-31 Identity = 15/26 (57.69%), Postives = 18/26 (69.23%), Query Frame = 1 Query: 1 VLMGAVEGYRIAG-GPLGEVTDPLYP 75 +LMG VEG+RI G +GE D LYP Sbjct: 168 LLMGLVEGFRINGLDGVGEGND-LYP 192
BLAST of BQ623672 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.706e-28 Identity = 57/71 (80.28%), Postives = 61/71 (85.92%), Query Frame = 2 Query: 86 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 298 FDPLGLADDP+ FAELKVKEIKNGRLAMFS GFFVQAIVTGKGP++NL DHLADP N A+A AT F PG Sbjct: 182 FDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKFTPG 252 HSP 2 Score: 25.409 bits (54), Expect = 2.706e-28 Identity = 14/27 (51.85%), Postives = 15/27 (55.56%), Query Frame = 1 Query: 1 VLMGAVEGYRIAGGPLG--EVTDPLYP 75 VLMG E YR GG G + D LYP Sbjct: 152 VLMGLAEAYRANGGSEGFLDDLDTLYP 178
BLAST of BQ623672 vs. ExPASy Swiss-Prot
Match: CB21_EUGGR (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.909e-22 Identity = 47/71 (66.20%), Postives = 52/71 (73.24%), Query Frame = 2 Query: 86 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP-VNNNAWAYATNFVP 295 FDPLGLADDP+ F ELKVKEIKNGRLAM M GF+ QAIVTG+GP+EN HL DP +N A T F P Sbjct: 51 FDPLGLADDPDTFPELKVKEIKNGRLAMSGMLGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTALVTQFAP 121 HSP 2 Score: 30.8018 bits (68), Expect = 1.909e-22 Identity = 17/28 (60.71%), Postives = 18/28 (64.29%), Query Frame = 1 Query: 1 VLMGAVEGYR---IAGGPLGEVTDPLYP 75 +LMGAVEGYR A G GE D LYP Sbjct: 20 LLMGAVEGYRAGNTAPGQFGEDLDRLYP 47
BLAST of BQ623672 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.982e-20 Identity = 46/60 (76.67%), Postives = 51/60 (85.00%), Query Frame = 2 Query: 86 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 265 FDPLGLA DPE A LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN Sbjct: 206 FDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN 265
BLAST of BQ623672 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.416e-17 Identity = 39/60 (65.00%), Postives = 49/60 (81.67%), Query Frame = 2 Query: 86 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 265 F+PLG D ++ ELK+KEIKNGRLAM ++ G+F+QA+VTG GP +NL DHLADPVNNN Sbjct: 206 FNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 265
BLAST of BQ623672 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.199e-16 Identity = 36/60 (60.00%), Postives = 48/60 (80.00%), Query Frame = 2 Query: 86 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 265 F+PLG D ++ ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL DH+ADPVNNN Sbjct: 208 FNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNN 267
BLAST of BQ623672 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.953e-15 Identity = 41/62 (66.13%), Postives = 46/62 (74.19%), Query Frame = 2 Query: 83 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 265 AFDPLG + DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 171 AFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 232
BLAST of BQ623672 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.953e-15 Identity = 41/62 (66.13%), Postives = 47/62 (75.81%), Query Frame = 2 Query: 83 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 265 AFDPLG + DP F ELKVKEIKNGRLA+ ++ GF V Q+ G GPLENLA HLADP +NN Sbjct: 172 AFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNN 233 The following BLAST results are available for this feature:
BLAST of BQ623672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623672 ID=BQ623672; Name=BQ623672; organism=Citrus sinensis; type=EST; length=411bpback to top |