BQ623686
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623686 vs. ExPASy Swiss-Prot
Match: RS4E_SULTO (30S ribosomal protein S4e OS=Sulfolobus tokodaii GN=rps4e PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.382e-16 Identity = 47/161 (29.19%), Postives = 84/161 (52.17%), Query Frame = 3 Query: 111 KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKAND-----TIKLDLEENKITDFIKFDVGNIVMVLG 578 + + GPHK E +PL L+L++ L A T RE ++++ ++VDG+VR D +P G MDV+SIP ++ FR++ D + E+AK+K ++ + + G +N DGR I P + + T+K+++ I + G +++G Sbjct: 25 RANPGPHKLSESIPLALLLKHYLNVAETTREAKRLVVEGKIMVDGRVRKDYKFPVGLMDVISIPSSDLYFRIVPDNIKYLMPVKISKEDAKYKFVRIVNKTTNKNGNIQLNLEDGRNILIPKEKVPEMNYPTLTTLKIEIPSQNIIKSYELSEGKYAIIIG 185
BLAST of BQ623686 vs. ExPASy Swiss-Prot
Match: RS4E_METHJ (30S ribosomal protein S4e OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps4e PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.951e-16 Identity = 49/162 (30.25%), Postives = 86/162 (53.09%), Query Frame = 3 Query: 102 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEE---NKITDFIKFDVGNIVMVLG 578 F K S GPH ++ LP+++ R+++ +E +L +R ++V+G+ G D+VSIPK+ +++R+L D KGR + ++ A +L K+ + + G +N DG + D K+ D+I L L+E N+I D F GN+ M++G Sbjct: 23 FVTKTSPGPH-NKNALPIVVWARDQMGIVRNMKEAKHVLREREIIVNGRPVRHPDMGIGIFDIVSIPKSGKHYRILRDKKGRHVTIPIDEDAASSRLVKITNKTIVKGGRIQLNLRDGSNV-LTDKQYKSGDSIVLSLKEGQKNEIIDHFPFQPGNMAMIIG 182 HSP 2 Score: 21.1718 bits (43), Expect = 3.951e-16 Identity = 7/11 (63.64%), Postives = 9/11 (81.82%), Query Frame = 1 Query: 43 HLKRLNAPKHW 75 HLKR+ +PK W Sbjct: 4 HLKRVVSPKSW 14
BLAST of BQ623686 vs. ExPASy Swiss-Prot
Match: RS4E_THEAC (30S ribosomal protein S4e OS=Thermoplasma acidophilum GN=rps4e PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 8.959e-16 Identity = 51/153 (33.33%), Postives = 76/153 (49.67%), Query Frame = 3 Query: 102 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGN 560 + P P+ G H + + L+ ++R+ LK + RE IL V VDGK +K + GFMDV+ I E++R++Y+ +G L E A KL KVRS + T+DGRT D K D + + + KI++ IK GN Sbjct: 23 WGPTPNPGMHPKDQSVTLLSIIRDYLKLSDKEREAARILANGLVKVDGKTVREKKFAVGFMDVIEI--NGESYRVVYNDQGALVLMKETKERASMKLLKVRSKVIAPGNRIQLGTHDGRTFITDDKSKKVGDVWAVSVPDMKISEIIKMQPGN 173
BLAST of BQ623686 vs. ExPASy Swiss-Prot
Match: RS4E_THEVO (30S ribosomal protein S4e OS=Thermoplasma volcanium GN=rps4e PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.690e-14 Identity = 48/159 (30.19%), Postives = 79/159 (49.69%), Query Frame = 3 Query: 102 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVLG 578 + P P G HK+ + L+ ++R+ L+ + RE IL V VDGKV ++ + GFMDV+ I + E++R++Y+ +G L S + A K +V++ + +DGR + D I D + L + KIT+ IK GN + G Sbjct: 23 WGPTPLPGRHKADHSVTLLTIIRDYLRLSDKEREATRILANGLVKVDGKVVKERKFGVGFMDVIEI--SGESYRVVYNNQGALVLVSESKDRANMKPLQVKNKVIAPGNKIQLGFHDGRVMVTEDRSISVGDVVIASLPDMKITEIIKMQPGNKAFITG 179
BLAST of BQ623686 vs. ExPASy Swiss-Prot
Match: RS4E_NANEQ (30S ribosomal protein S4e OS=Nanoarchaeum equitans GN=rps4e PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.207e-14 Identity = 54/153 (35.29%), Postives = 77/153 (50.33%), Query Frame = 3 Query: 96 GAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCK-VRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFD 551 G + KPS GPH +P+ + LR+ L A REV +L VLVDG+ D +P G DV++IP+ NE +R+L D +G+ L + EEA K K +R V I Y T DGRT D K + + ++ KI + I + Sbjct: 26 GYWIVKPSPGPHSKEFAMPIAVWLRDYLGLAENMREVRYLLNNGKVLVDGRPIKDYKFPVGLFDVLAIPEINEYYRVLLDERGKLYLKKIDKEEANIKYGKIIRKVSVRGGKIQYTLT-DGRTF-LGDNSYKTHYGVVYEIPNFKIREVIPLE 176
BLAST of BQ623686 vs. ExPASy Swiss-Prot
Match: RS4E_PICTO (30S ribosomal protein S4e OS=Picrophilus torridus GN=rps4e PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.916e-14 Identity = 47/152 (30.92%), Postives = 79/152 (51.97%), Query Frame = 3 Query: 123 GPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVLG 578 G HK +PL++ LR+ LK RE+ IL V+VDGKV ++ GFMD +++ + ++ + YD KG+ + E KL +V+ + + G I+ +DG T+ IK D++ + + + +I D +KF GN V + G Sbjct: 30 GSHKKDSSIPLLIALRDYLKLGDKEREITRILTNSLVMVDGKVVKERRRGIGFMDTLTV--SGNDYLVSYDRKGKLVILPKPGETKGLKLLRVKGKTYVKGGRIQISFHDGSTMVTDRKDIKNGDSVLVKIPKKEIVDVLKFAPGNRVFITG 179
BLAST of BQ623686 vs. ExPASy Swiss-Prot
Match: RS4E_METS5 (30S ribosomal protein S4e OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps4e PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 8.385e-14 Identity = 48/161 (29.81%), Postives = 79/161 (49.07%), Query Frame = 3 Query: 111 KPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDP-----LIKANDTIKLDLEENKITDFIKFDVGNIVMVLG 578 + S GPH + +PL L+LR+ L + + +E I+ VLVDG+VR D YP G MDV++IP + R++ D + + +EE+KFKL ++ + + G+ N DGR + + T+K+ + +I F VM +G Sbjct: 25 RASPGPHPLGKSIPLGLLLRDYLAFTSSLKESKKIISDGKVLVDGRVRRDYKYPVGLMDVIAIPHADLYLRIVPDRARLLKPVKISEEESKFKLVRLLNKTLVKGGLLQFNLEDGRNLLISKESTEMFKLPTLTTLKISIPNQEILGVYGFKENVYVMAVG 185
BLAST of BQ623686 vs. ExPASy Swiss-Prot
Match: RS4_BIGNA (40S ribosomal protein S4 OS=Bigelowiella natans GN=RPS4 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.123e-13 Identity = 40/159 (25.16%), Postives = 76/159 (47.80%), Query Frame = 3 Query: 96 GAFAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMV 572 G F K SSGPH + + L+ +++ A +E ++ + V+GK +P MD +S P N+++R+L G+ ++ + E K+CKV + I T D R ++ IK D++ + ++I +KF+VG++ ++ Sbjct: 25 GIFNTKISSGPHSKVKSVSLLNIIKKFFHLADNNQEAQKVVKTGFLYVNGKKCLSHKFPISLMDTISFPLANKHYRVLLSKAGKLTVYEINQNEKDLKICKVIKIINASSKNKIIITDDLRELKINYAKIKVEDSLLIKTINDEIVYALKFEVGSLCLI 183 HSP 2 Score: 23.483 bits (49), Expect = 2.123e-13 Identity = 8/14 (57.14%), Postives = 13/14 (92.86%), Query Frame = 1 Query: 22 MARGLKKHLKRLNA 63 MA+G+KKH KR+++ Sbjct: 1 MAKGIKKHQKRISS 14
BLAST of BQ623686 vs. ExPASy Swiss-Prot
Match: RS4E_HALSA (30S ribosomal protein S4e OS=Halobacterium salinarium GN=rps4e PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 1.808e-11 Identity = 43/155 (27.74%), Postives = 72/155 (46.45%), Query Frame = 3 Query: 102 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 566 F K +GPH +PL++VLR+ L+Y E + VLV+G D P G D+++ P +E +R+ D GR L + + A KL KV G +N +DG + + D++ +D + N+I +++ G +V Sbjct: 23 FTAKAGAGPH-GESGVPLVVVLRDVLEYVDDTSEAQYAINTDGVLVNGDSVGDVNRPIGMFDILAFPDRDEYYRVFPDEGGRLGLTEIDADAAGSKLNKVTDKTTVSGGRTQLNFHDGSNLALDEDAYAGGDSVVVDTDTNEIVAHFQYEEGALV 176 HSP 2 Score: 21.557 bits (44), Expect = 1.808e-11 Identity = 7/14 (50.00%), Postives = 9/14 (64.29%), Query Frame = 1 Query: 34 LKKHLKRLNAPKHW 75 + H KRL+ PK W Sbjct: 1 MTNHQKRLSVPKSW 14
BLAST of BQ623686 vs. ExPASy Swiss-Prot
Match: RS4E_HALS3 (30S ribosomal protein S4e OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rps4e PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 1.808e-11 Identity = 43/155 (27.74%), Postives = 72/155 (46.45%), Query Frame = 3 Query: 102 FAPKPSSGPHKSRECLPLILVLRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIV 566 F K +GPH +PL++VLR+ L+Y E + VLV+G D P G D+++ P +E +R+ D GR L + + A KL KV G +N +DG + + D++ +D + N+I +++ G +V Sbjct: 23 FTAKAGAGPH-GESGVPLVVVLRDVLEYVDDTSEAQYAINTDGVLVNGDSVGDVNRPIGMFDILAFPDRDEYYRVFPDEGGRLGLTEIDADAAGSKLNKVTDKTTVSGGRTQLNFHDGSNLALDEDAYAGGDSVVVDTDTNEIVAHFQYEEGALV 176 HSP 2 Score: 21.557 bits (44), Expect = 1.808e-11 Identity = 7/14 (50.00%), Postives = 9/14 (64.29%), Query Frame = 1 Query: 34 LKKHLKRLNAPKHW 75 + H KRL+ PK W Sbjct: 1 MTNHQKRLSVPKSW 14 The following BLAST results are available for this feature:
BLAST of BQ623686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623686 ID=BQ623686; Name=BQ623686; organism=Citrus sinensis; type=EST; length=622bpback to top |