BQ623696

Overview
NameBQ623696
Unique NameBQ623696
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length642
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623696 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.337e-33
Identity = 75/193 (38.86%), Postives = 112/193 (58.03%), Query Frame = 3
Query:    6 FVYRVIWALKLKGVPYEFVSEDLSNKSALLLKYNPVHKKIPVLVHGGKPVCESMVILQYIEETWPQNPSLMPNNPYDRAHARFWIKFAEDK----GVAVWKMFRSTGQELQNTMKEALEMLQTVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDAVGVKLFESHKFPRLHAWLENFKQVPIIEENLPN 572
            F  R+  AL LKG+ YE   E+LS+KS LLL+ NPVHKKIP+L+H  K +CES+ IL+YI+E W     L+P++PY+R+ ARFW  + + K    G  VW      G++ +   KE +E+L+T+E   LG K +F GDN+G VD+A      W    E      +    + P+L  W +   +   + ++LP+
Sbjct:   16 FGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCPLLPSDPYERSQARFWADYIDKKIYSTGRRVWS---GKGEDQEEAKKEFIEILKTLEGE-LGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSI--EAECPKLVVWAKTCMESESVSKSLPH 202          
BLAST of BQ623696 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.281e-33
Identity = 76/193 (39.38%), Postives = 114/193 (59.07%), Query Frame = 3
Query:    6 FVYRVIWALKLKGVPYEFVSEDLSNKSALLLKYNPVHKKIPVLVHGGKPVCESMVILQYIEETWPQNPSLMPNNPYDRAHARFWIKFAEDK----GVAVWKMFRSTGQELQNTMKEALEMLQTVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDAVGVKLFESHKFPRLHAWLENFKQVPIIEENLPN 572
            F  R+  AL LKG+ YE   E+LS+KS LLL+ NPVHKKIP+L+H GKP+CES+ IL+YI+E W +   L+P++PY R+ ARFW  + ++K    G  VW      G++ +   KE +E+ +T+E   LG K +F GDN+G VD+A      W    E      +    +  +L  W +N  +   + ++LP+
Sbjct:   16 FGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYIDNKIYSTGRRVWS---GKGEDQEEAKKEFIEIFKTLEGE-LGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSI--EAECRKLVVW-QNCMENERVSKSLPH 201          
BLAST of BQ623696 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.691e-28
Identity = 77/221 (34.84%), Postives = 120/221 (54.30%), Query Frame = 3
Query:    3 PFVYRVIWALKLKGVPYEFVSEDLSNKSALLLKYNPVHKKIPVLVHGGKPVCESMVILQYIEETWPQNPSLMP-------NNPYDRAHARFWIKFAE----DKGVAVWKMFRSTGQELQNTMKEALEMLQTVEEHGLGEKKFF---NGDNIGLVDLAFGSIVYWLQVIEDAVGVKLFESHKFPRLHAWLENFKQVPIIEENLPNQDEMLVVSNAVVNSWGL 623
            PF  R   A+  KG+ +E+  EDL NKS LLL+ NPVH+KIPVL+H G+PV ES+VILQY+++ +P  P L+P       +  Y RA ARFW  + +    D G  +W++    G+      +E  E+L+T+E   LG+++FF    G  +G VD+A      W    E   G  + E    PRL AW     ++  + ++LP+ +++      +   +G+
Sbjct:   16 PFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRL---KGEPQAAAGREMAEILRTLEAE-LGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEE--VAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKKYGV 230          
BLAST of BQ623696 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.427e-28
Identity = 78/221 (35.29%), Postives = 120/221 (54.30%), Query Frame = 3
Query:    3 PFVYRVIWALKLKGVPYEFVSEDLSNKSALLLKYNPVHKKIPVLVHGGKPVCESMVILQYIEETWPQNPSLM-PNN------PYDRAHARFWIKFAE----DKGVAVWKMFRSTGQELQNTMKEALEMLQTVEEHGLGEKKFF---NGDNIGLVDLAFGSIVYWLQVIEDAVGVKLFESHKFPRLHAWLENFKQVPIIEENLPNQDEMLVVSNAVVNSWGL 623
            PF  R   A+  KG+ +E+  EDL NKS LLL+ NPVH+KIPVL+H G+PV ES+VILQY+++ +P  P L+ P N       Y RA ARFW  + +    D G  +W++    G+      +E  E+L+T+E   LG+++FF    G  +G VD+A      W    E   G  + E    PRL AW     ++  + ++LP+ +++      +   +G+
Sbjct:   16 PFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRL---KGEPQAAAGREMAEILRTLEAE-LGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEE--VAPRLAAWARRCGRIDSVAKHLPSPEKVYDFVGVLKKKYGV 230          
BLAST of BQ623696 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 6.883e-22
Identity = 72/211 (34.12%), Postives = 112/211 (53.08%), Query Frame = 3
Query:    3 PFVYRVIWALKLKGVPYEFVSEDLS-NKSALLLKYNPVHKKIPVLV-HGGKPVCESMVILQYIEETWPQNPS------LMPNNPYDRAHARFWIKFAEDK------GVAVWKMFRSTGQELQNTMKEALEMLQTVEEHGLGEKKFFNGDNI--GLVDLAFGSIVYWLQVIEDAVGVKLFESHKFPRLHAWLENFKQVPIIEENLPNQDEML 587
            PF  R   AL L+GV YE + E L   KS  LL  NPV+ KIPVL+   G+ +CES VI+QYIE+   ++        L+P++PY+RA  RFW  F +DK       V++     +  Q  ++T + AL +L+   +     + FF+G +   GL+DLA G  +  L+  E   G+ L ++   P L  W + F   P  +  LP+ ++++
Sbjct:   10 PFTARARLALDLRGVAYELLDEPLGPKKSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDT-RAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVV 219          
BLAST of BQ623696 vs. ExPASy Swiss-Prot
Match: GSTO1_MOUSE (Glutathione S-transferase omega-1 OS=Mus musculus GN=Gsto1 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.301e-12
Identity = 54/185 (29.19%), Postives = 93/185 (50.27%), Query Frame = 3
Query:    3 PFVYRVIWALKLKGVPYEFVSEDLSNKSALLLKYNPVHKKIPVLVHG-GKPVCESMVILQYIEETWPQNPSLMPNNPYDRAHARFWIKFAEDKGVAVWKMFRSTGQELQNTMKEALE-MLQTVEEHGLGEKKFFNGDNIGLVDLAFGSIVYWLQVIEDAVGVKLFESHKFPRLHAWLENFKQVPI 551
            PF  R +  LK KG+ +E ++ +L NK     + NP+   +PVL +  G  V ES++  +Y++E +P+   L P++PY +A  +  ++        +    RS  +E    ++EALE   + +EE     K F  GD+  +VD        W Q +E A+ +K   +H  P+L  W+   +Q P+
Sbjct:   33 PFAQRTLMVLKAKGIRHEVININLKNKPEWFFEKNPL-GLVPVLENSQGHLVTESVITCEYLDEAYPEK-KLFPDDPYKKARQKMTLESFSKVPPLIASFVRSKRKEDSPNLREALENEFKKLEEGMDNYKSFLGGDSPSMVDYLTWP---WFQRLE-ALELKECLAHT-PKLKLWMAAMQQDPV 210          
BLAST of BQ623696 vs. ExPASy Swiss-Prot
Match: GSTO1_HUMAN (Glutathione S-transferase omega-1 OS=Homo sapiens GN=GSTO1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 8.433e-12
Identity = 56/197 (28.43%), Postives = 94/197 (47.72%), Query Frame = 3
Query:    3 PFVYRVIWALKLKGVPYEFVSEDLSNKSALLLKYNPVHKKIPVLVHG-GKPVCESMVILQYIEETWPQNPSLMPNNPYDRAHARFWIKFAEDKGVAVWKMFRSTGQELQNTMKEALEMLQTVEEHGLGEKK--FFNGDNIGLVDLAFGSIVYWLQVIEDAVGVKLFES-HKFPRLHAWLENFKQVPIIEENLPNQDE 581
            PF  R    LK KG+ +E ++ +L NK     K NP    +PVL +  G+ + ES +  +Y++E +P    L+P++PY++A  +  ++        V    RS  +E    +KE      T  E  L  KK  FF G++I ++D     I  W + +E    +KL E     P+L  W+   K+ P +   L ++ +
Sbjct:   33 PFAERTRLVLKAKGIRHEVININLKNKPEWFFKKNP-FGLVPVLENSQGQLIYESAITCEYLDEAYP-GKKLLPDDPYEKACQKMILELFSKVPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYL---IWPWFERLE---AMKLNECVDHTPKLKLWMAAMKEDPTVSALLTSEKD 221          
BLAST of BQ623696 vs. ExPASy Swiss-Prot
Match: GSTO1_RAT (Glutathione S-transferase omega-1 OS=Rattus norvegicus GN=Gsto1 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.185e-11
Identity = 49/186 (26.34%), Postives = 92/186 (49.46%), Query Frame = 3
Query:    3 PFVYRVIWALKLKGVPYEFVSEDLSNKSALLLKYNPVHKKIPVLVH-GGKPVCESMVILQYIEETWPQNPSLMPNNPYDRAHARFWIKFAEDKGVAVWKMFRSTGQELQNTMKEALEMLQTVEEHGLGEKK--FFNGDNIGLVDLAFGSIVYWLQVIEDAVGVKLFESHKFPRLHAWLENFKQVPI 551
            PF  R +  LK KG+ +E ++ +L NK     + NP    +PVL +  G  + ES++  +Y++E +P+   L P++PY++A  +   +        V    R+  +E    +KE L+   +  E  +  K+  FF G+++ ++D     I  W Q +E A+ +     H  P+L  W+   ++ P+
Sbjct:   33 PFAQRTLMVLKAKGIRHEIININLKNKPEWFFEKNP-FGLVPVLENTQGHLITESVITCEYLDEAYPEK-KLFPDDPYEKACQKMTFELFSKVPSLVTSFIRAKRKEDHPGIKEELKKEFSKLEEAMANKRTAFFGGNSLSMIDYL---IWPWFQRLE-ALELNECIDHT-PKLKLWMATMQEDPV 211          
The following BLAST results are available for this feature:
BLAST of BQ623696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
GSTXA_TOBAC1.337e-3338.86Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX1_NICPL2.281e-3339.38Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
GSTU1_ORYSJ1.691e-2834.84Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI6.427e-2835.29Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTX2_MAIZE6.883e-2234.12Probable glutathione S-transferase BZ2 OS=Zea mays... [more]
GSTO1_MOUSE1.301e-1229.19Glutathione S-transferase omega-1 OS=Mus musculus ... [more]
GSTO1_HUMAN8.433e-1228.43Glutathione S-transferase omega-1 OS=Homo sapiens ... [more]
GSTO1_RAT4.185e-1126.34Glutathione S-transferase omega-1 OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00787 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00787 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623696 ID=BQ623696; Name=BQ623696; organism=Citrus sinensis; type=EST; length=642bp
GTCCATTTGTTTACAGGGTGATTTGGGCTCTGAAATTGAAAGGCGTGCCA
TATGAATTTGTTTCCGAAGATCTCTCAAACAAAAGTGCATTGCTTTTGAA
GTATAATCCGGTTCACAAGAAGATCCCAGTGCTCGTCCATGGCGGAAAAC
CAGTTTGTGAGTCCATGGTTATTCTACAATACATTGAAGAGACGTGGCCA
CAGAATCCCTCCTTGATGCCAAATAATCCTTATGATAGAGCTCATGCTCG
ATTCTGGATCAAATTCGCTGAAGACAAGGGTGTTGCGGTTTGGAAAATGT
TTCGTAGCACTGGACAAGAACTACAAAACACAATGAAGGAAGCCTTGGAA
ATGCTACAAACCGTTGAAGAGCATGGCTTGGGAGAGAAAAAATTTTTCAA
TGGAGACAATATTGGTTTAGTGGACCTAGCGTTTGGTTCAATTGTTTATT
GGTTGCAAGTCATTGAAGATGCAGTGGGAGTTAAACTATTTGAATCACAC
AAATTCCCTCGCTTGCATGCCTGGCTTGAAAATTTCAAGCAAGTCCCCAT
AATTGAAGAAAACCTTCCCAATCAGGATGAAATGTTGGTTGTTTCAAACG
CCGTCGTGAACAGTTGGGGGCTTCTGCTTGAATGCAGTAACA
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