BQ623700

Overview
NameBQ623700
Unique NameBQ623700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length543
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.137e-47
Identity = 88/109 (80.73%), Postives = 98/109 (89.91%), Query Frame = 3
Query:   24 GTAQAVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 350
            G  +  GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYNKD +WDD W+FWVGPFIGAA+AA YH  ++RA
Sbjct:  171 GYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRA 279          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 188.348 bits (477), Expect = 1.939e-47
Identity = 86/109 (78.90%), Postives = 98/109 (89.91%), Query Frame = 3
Query:   24 GTAQAVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 350
            G  +  GL AEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYN+  AWDD W+FWVGPFIGAA+AA YHQ ++RA
Sbjct:  173 GYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAAIYHQVVIRA 281          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.257e-46
Identity = 87/109 (79.82%), Postives = 97/109 (88.99%), Query Frame = 3
Query:   24 GTAQAVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 350
            G  +  GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYN + AW+D W+FWVGP IGAA+AA YHQ I+RA
Sbjct:  172 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNDEHAWNDHWIFWVGPMIGAALAAIYHQIIIRA 280          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.257e-46
Identity = 86/109 (78.90%), Postives = 97/109 (88.99%), Query Frame = 3
Query:   24 GTAQAVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 350
            G  +  GL AEI+GTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA++YN+  AW+D W+FWVGPFIGAA+AA YH  I+RA
Sbjct:  173 GYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRSHAWNDHWIFWVGPFIGAALAAIYHVVIIRA 281          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 2.800e-46
Identity = 84/109 (77.06%), Postives = 97/109 (88.99%), Query Frame = 3
Query:   24 GTAQAVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 350
            G  +  GL AEI+GTF+LVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+++NK   W+D W+FWVGPFIGAA+AA YHQ ++RA
Sbjct:  175 GYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNKKIGWNDHWIFWVGPFIGAALAALYHQVVIRA 283          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.064e-45
Identity = 84/109 (77.06%), Postives = 96/109 (88.07%), Query Frame = 3
Query:   24 GTAQAVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 350
            G  +  GL AEI+GTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA++YN+  AW D W+FWVGPFIGAA+AA YH  ++RA
Sbjct:  173 GYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRAHAWHDHWIFWVGPFIGAALAAIYHVVVIRA 281          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 1.420e-45
Identity = 85/115 (73.91%), Postives = 97/115 (84.35%), Query Frame = 3
Query:   24 GTAQAVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKAL 368
            G + A  L AEI+GTF+LVYTVFSATDPKR+ARDS +PVL PLPIGFAVF+VHLATIPITGTGINPARSLGAAV+YN+  AW D W+FWVGP IGA +AA YH+ +LR  A KAL
Sbjct:  166 GYSAAGALGAEIVGTFILVYTVFSATDPKRTARDSFIPVLVPLPIGFAVFVVHLATIPITGTGINPARSLGAAVLYNQHAAWKDHWIFWVGPVIGAFLAAAYHKLVLRGEAAKAL 280          

HSP 2 Score: 24.2534 bits (51), Expect = 1.420e-45
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 2
Query:    2 GANELADGYSTGGWIG 49
            GAN ++DGYS  G +G
Sbjct:  159 GANTVSDGYSAAGALG 174          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 5.281e-45
Identity = 85/109 (77.98%), Postives = 95/109 (87.16%), Query Frame = 3
Query:   24 GTAQAVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 350
            G  +  GL AEI+GTF+LVYTVFSATD KR ARDSHVP+LAPLPIGFAVF+VHLAT+ ITGTGINPARSLGAAVIYN+  AW D W+FWVGPFIGAA+AA YHQ I+RA
Sbjct:  172 GYTKGDGLGAEIVGTFILVYTVFSATDAKRRARDSHVPILAPLPIGFAVFLVHLATMGITGTGINPARSLGAAVIYNQHHAWADHWIFWVGPFIGAALAAIYHQVIIRA 280          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 9.960e-44
Identity = 82/109 (75.23%), Postives = 92/109 (84.40%), Query Frame = 3
Query:   24 GTAQAVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 350
            G  +  GL AE++GTFVLVYTVFSATD KR+ARDSHVP LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IY+    W   W+FWVGPF GAA+AA YHQ +LRA
Sbjct:  179 GYTKGDGLGAEVVGTFVLVYTVFSATDAKRTARDSHVPALAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYDNPHGWHGHWIFWVGPFAGAALAAVYHQVVLRA 287          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.042e-41
Identity = 82/123 (66.67%), Postives = 91/123 (73.98%), Query Frame = 3
Query:    3 GPTSWPMGTAQAVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVI--YNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKA 365
            G      G +   G+ AE++GTFVLVYTVFSATDPKR ARDSHVPVLAPLPIG AV +VHLATIPITGTGINPARSLG A++      KAW   W+FWVGPF GAA A  YH +ILR  A KA
Sbjct:  147 GANELAAGYSAGAGVVAEMVGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGLAVLVVHLATIPITGTGINPARSLGPALVLGLGTTKAWSHLWIFWVGPFAGAAAAMIYHHYILRGAAAKA 269          
The following BLAST results are available for this feature:
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
PIP11_ARATH1.137e-4780.73Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP12_ORYSJ1.939e-4778.90Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP1_SOLLC1.257e-4679.82Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP15_MAIZE1.257e-4678.90Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP2_PEA2.800e-4677.06Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP13_ORYSJ1.064e-4577.06Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP27_ORYSJ1.420e-4573.91Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP11_MAIZE5.281e-4577.98Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP16_MAIZE9.960e-4475.23Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP28_ORYSJ6.042e-4166.67Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00791 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00791 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623700 ID=BQ623700; Name=BQ623700; organism=Citrus sinensis; type=EST; length=543bp
TGGGGCCAACGAGCTGGCCGATGGGTACAGCACAGGCGGTTGGATTGGCC
GCCGAGATCATCGGCACCTTTGTGTTGGTTTACACTGTCTTCTCGGCCAC
TGATCCCAAGAGAAGCGCCAGAGACTCCCATGTCCCCGTTTTGGCACCGC
TCCCCATTGGATTTGCTGTGTTCATGGTACACTTGGCCACAATCCCAATC
ACTGGCACTGGCATTAACCCAGCAAGGAGTCTCGGGGCCGCTGTTATTTA
CAACAAGGACAAGGCTTGGGATGATCAATGGCTCTTCTGGGTTGGACCCT
TCATCGGTGCAGCAATTGCGGCTTTCTACCACCAATTCATCTTGAGAGCT
GGAGCTGTCAAGGCTCTTGGTTCATTCAGGAGCCAATCCCGTGTCTGATT
TTAGTTTCGACAAGTGGATTATCCACATCTTCATGGGGTTAATGATTTAA
AATTGGAAAGAAAAAACTGGGAAGGAGTAGAGGTGTGTTAAGTTTCAAAA
AGTGAATAATGAGGGGGGGGGTGATTTGGGCTTTCAAGGAATT
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