BQ623700

Overview
NameBQ623700
Unique NameBQ623700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length543
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7528 contig Csv1_Contig7528:621..1162. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.147e-15
Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 3
Query:   42 GLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 341
            GL  E+I TF LV+T+F++ D KR+     +     L IGF+V + HL  I  TG  +NPARS G AVI      W++ W++WVGP IGA +A   ++++
Sbjct:  162 GLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGALYEYV 254          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.499e-15
Identity = 48/107 (44.86%), Postives = 60/107 (56.07%), Query Frame = 3
Query:   24 GTAQAVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 344
            G +   GL  EI+ TF LV  V + TD +R      VP    L IG +V + HL  I  TG G+NPARS G+AV+    K +   W+FWVGP IG A AA  + FIL
Sbjct:  136 GVSAGQGLGVEILVTFQLVLCVVAVTDRRRHDVSGSVP----LAIGLSVALGHLIAIDYTGCGMNPARSFGSAVL---TKNFTYHWIFWVGPMIGGAAAAIIYDFIL 235          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.499e-15
Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 3
Query:   42 GLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 341
            GL  E+I TF LV+T+F++ D KR+     +     L IGF+V + HL  I  TG  +NPARS G AVI      W++ W++WVGP IGA +A   ++++
Sbjct:  159 GLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYV 251          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.499e-15
Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 3
Query:   42 GLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 341
            GL  E+I TF LV+T+F++ D KR+     +     L IGF+V + HL  I  TG  +NPARS G AVI      W++ W++WVGP IGA +A   ++++
Sbjct:  159 GLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYV 251          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.556e-15
Identity = 45/108 (41.67%), Postives = 65/108 (60.19%), Query Frame = 3
Query:   24 GTAQAVGLAAEIIGTFVLVYTVFSAT-DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 344
            G     GL  EII TF LVY V+S   DPKR +    + ++APL IG  V    L   P +G  +NPAR+ G A++  +   W D W++WVGPFIG+A+AA  +++++
Sbjct:  146 GVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGS----LGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALVGWR---WHDHWIYWVGPFIGSALAALIYEYMV 246          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.360e-15
Identity = 39/98 (39.80%), Postives = 58/98 (59.18%), Query Frame = 3
Query:   54 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILR 347
            E + TF+LV  V   +DP R+     +   APL +G ++   HL  I +TG  +NPARS G AV+ N    W D W++WVGP +GA +AA  ++F+ +
Sbjct:  148 EALITFILVVVVKGVSDPGRT----DIKGSAPLAVGLSIAAGHLCAIKLTGASMNPARSFGPAVVQN---MWIDHWVYWVGPIVGAIVAALLYKFVFK 238          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 7.438e-15
Identity = 41/100 (41.00%), Postives = 60/100 (60.00%), Query Frame = 3
Query:   42 GLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 341
            GL  E+I TF LV+T+F++ D KR+     +     L IGF+V + HL  I  TG  +NPARS G AVI      W + W++WVGP +GA +A   ++++
Sbjct:  159 GLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WANHWIYWVGPIMGAVLAGALYEYV 251          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 7.438e-15
Identity = 41/100 (41.00%), Postives = 60/100 (60.00%), Query Frame = 3
Query:   42 GLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 341
            GL  E+I TF LV+T+F++ D KR+     +     L IG +V + HL  I  TG  +NPARS G AVI      W++ W++WVGP IGA +A   ++++
Sbjct:  159 GLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYV 251          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.164e-14
Identity = 42/114 (36.84%), Postives = 60/114 (52.63%), Query Frame = 3
Query:    9 TSWPMGTAQAVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 350
            TS   G    +G   E   TFVL+  V S  D +R     ++   AP+ +G A+   HLA I  TG+ +NPARS G AV  N D  W + W++W GP +G  +A   ++ + RA
Sbjct:  136 TSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRRK----NLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPAV--NGDDNWANHWVYWAGPIVGGVVAGITYRALFRA 243          
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.826e-14
Identity = 47/114 (41.23%), Postives = 63/114 (55.26%), Query Frame = 3
Query:    3 GPTSWPMGTAQAVGLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 341
            G  S   G      +  EI+ TF LVYTV++ A DPK+      + V+AP+ IGF V    LA     G  +NPA S G AV+      WD+ W++W+GPF+GAAIAA  +  I
Sbjct:  131 GAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKG----DLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWDNHWVYWLGPFVGAAIAALIYDII 237          
The following BLAST results are available for this feature:
BLAST of BQ623700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
AQP4_NOTAL1.147e-1542.00Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQPA_RANES1.499e-1544.86Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP4_HUMAN1.499e-1542.00Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP4_DIPME1.499e-1542.00Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
TIP31_ARATH2.556e-1541.67Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
AQP_HAEIX4.360e-1539.80Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
AQP4_MOUSE7.438e-1541.00Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP4_BOVIN7.438e-1541.00Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQP_CICVR2.164e-1436.84Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
TIP12_ORYSJ2.826e-1441.23Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00791 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00791 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623700 ID=BQ623700; Name=BQ623700; organism=Citrus sinensis; type=EST; length=543bp
TGGGGCCAACGAGCTGGCCGATGGGTACAGCACAGGCGGTTGGATTGGCC
GCCGAGATCATCGGCACCTTTGTGTTGGTTTACACTGTCTTCTCGGCCAC
TGATCCCAAGAGAAGCGCCAGAGACTCCCATGTCCCCGTTTTGGCACCGC
TCCCCATTGGATTTGCTGTGTTCATGGTACACTTGGCCACAATCCCAATC
ACTGGCACTGGCATTAACCCAGCAAGGAGTCTCGGGGCCGCTGTTATTTA
CAACAAGGACAAGGCTTGGGATGATCAATGGCTCTTCTGGGTTGGACCCT
TCATCGGTGCAGCAATTGCGGCTTTCTACCACCAATTCATCTTGAGAGCT
GGAGCTGTCAAGGCTCTTGGTTCATTCAGGAGCCAATCCCGTGTCTGATT
TTAGTTTCGACAAGTGGATTATCCACATCTTCATGGGGTTAATGATTTAA
AATTGGAAAGAAAAAACTGGGAAGGAGTAGAGGTGTGTTAAGTTTCAAAA
AGTGAATAATGAGGGGGGGGGTGATTTGGGCTTTCAAGGAATT
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