BQ623709

Overview
NameBQ623709
Unique NameBQ623709
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length645
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623709 vs. ExPASy Swiss-Prot
Match: FER_DATST (Ferredoxin OS=Datura stramonium PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.802e-31
Identity = 61/96 (63.54%), Postives = 73/96 (76.04%), Query Frame = 2
Query:  149 ATYKVKLITPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEMS 436
            ATYKVKL+TP+G  E  CPDD YILD AE+ G DLPYSCRAGSCS+CAGK            +L+DDQ+  G+VLTCVAYP SDVT+ETHK+EE++
Sbjct:    1 ATYKVKLVTPDGPVEFNCPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMADGFVLTCVAYPQSDVTIETHKEEELT 96          
BLAST of BQ623709 vs. ExPASy Swiss-Prot
Match: FER_DATQU (Ferredoxin OS=Datura quercifolia PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.802e-31
Identity = 61/96 (63.54%), Postives = 73/96 (76.04%), Query Frame = 2
Query:  149 ATYKVKLITPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEMS 436
            ATYKVKL+TP+G  E  CPDD YILD AE+ G DLPYSCRAGSCS+CAGK            +L+DDQ+  G+VLTCVAYP SDVT+ETHK+EE++
Sbjct:    1 ATYKVKLVTPDGPVEFNCPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMADGFVLTCVAYPQSDVTIETHKEEELT 96          
BLAST of BQ623709 vs. ExPASy Swiss-Prot
Match: FER_CHLFR (Ferredoxin OS=Chlorogloeopsis fritschii PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 4.802e-31
Identity = 68/98 (69.39%), Postives = 76/98 (77.55%), Query Frame = 2
Query:  146 MATYKVKLITP-EG-EQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 433
            MATYKV LI   EG  Q IE  DDTYILDAAE+AG+DLPYSCRAG+CSTCAGK            FL+DDQI+AGYVLTCVAYPTSD T+ETHK+EE+
Sbjct:    1 MATYKVTLINDAEGLNQTIEVDDDTYILDAAEEAGLDLPYSCRAGACSTCAGKIKSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEEL 98          
BLAST of BQ623709 vs. ExPASy Swiss-Prot
Match: FER1_HYONI (Ferredoxin-1 OS=Hyoscyamus niger PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.272e-31
Identity = 61/96 (63.54%), Postives = 73/96 (76.04%), Query Frame = 2
Query:  149 ATYKVKLITPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEMS 436
            ATYKVKL+TP+G  E  CPDD YILD AE+ G +LPYSCRAGSCS+CAGK            FL+DDQI  G+VLTCVAYP SDVT+ETHK+E+++
Sbjct:    1 ATYKVKLVTPDGPVEFNCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEDLT 96          
BLAST of BQ623709 vs. ExPASy Swiss-Prot
Match: FER_LYCCN (Ferredoxin OS=Lycium chinense PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.192e-31
Identity = 61/96 (63.54%), Postives = 73/96 (76.04%), Query Frame = 2
Query:  149 ATYKVKLITPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEMS 436
            ATYKVKL+TP+G  E +CPDD YILD AE+ G +LPYSCRAGSCS+CAGK            FL+DDQI  G+VLTCVAYP SDVT+ETHK+E ++
Sbjct:    1 ATYKVKLVTPDGPVEFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEALT 96          
BLAST of BQ623709 vs. ExPASy Swiss-Prot
Match: FER2_PHYAM (Ferredoxin-2 OS=Phytolacca americana PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.192e-31
Identity = 58/96 (60.42%), Postives = 76/96 (79.17%), Query Frame = 2
Query:  149 ATYKVKLITPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEMS 436
            A+YKV  +TP G   I CP DTY+LDAAE++G+DLPYSCRAG+CS+CAGK            FLE++Q++AG+VLTCVAYPTSDVT+ETHK+E+++
Sbjct:    2 ASYKVTFVTPSGTNTITCPADTYVLDAAEESGLDLPYSCRAGACSSCAGKVTAGAVNQEDGSFLEEEQMEAGWVLTCVAYPTSDVTIETHKEEDLT 97          
BLAST of BQ623709 vs. ExPASy Swiss-Prot
Match: FER2_HYONI (Ferredoxin-2 OS=Hyoscyamus niger PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.192e-31
Identity = 60/96 (62.50%), Postives = 74/96 (77.08%), Query Frame = 2
Query:  149 ATYKVKLITPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEMS 436
            ATYKVKL+TP+G  E +CPDD YILD AE+ G +LPYSCRAGSCS+CAGK            FL+DDQ+  G+VLTCVAYP SDVT+ETHK+E+++
Sbjct:    1 ATYKVKLVTPDGPVEFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVKAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKEEDLT 96          
BLAST of BQ623709 vs. ExPASy Swiss-Prot
Match: FER_SOLNI (Ferredoxin OS=Solanum nigrum PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.070e-30
Identity = 60/96 (62.50%), Postives = 74/96 (77.08%), Query Frame = 2
Query:  149 ATYKVKLITPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEMS 436
            ATYKVKL+TP+G  E +CPDD YILD AE+ G +LPYSCRAGSCS+CAGK            FL+DDQ+  G+VLTCVAYP SDVT+ETHK+E+++
Sbjct:    1 ATYKVKLVTPDGPIEFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQMADGFVLTCVAYPKSDVTIETHKEEDLT 96          
BLAST of BQ623709 vs. ExPASy Swiss-Prot
Match: FER_SOLLY (Ferredoxin OS=Solanum lyratum PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.397e-30
Identity = 60/95 (63.16%), Postives = 73/95 (76.84%), Query Frame = 2
Query:  149 ATYKVKLITPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 433
            ATYKVKLITPEG  E  CPDD YILD+AE+ G DLPYSCRAG+CS+CAGK            FL+DDQ+  G+VLTCVAYP S+VT+ETHK++++
Sbjct:    1 ATYKVKLITPEGPVEFNCPDDVYILDSAEENGHDLPYSCRAGACSSCAGKITAGNVDQSDNSFLDDDQVAEGFVLTCVAYPKSNVTIETHKEDDL 95          
BLAST of BQ623709 vs. ExPASy Swiss-Prot
Match: FER_SCOJA (Ferredoxin OS=Scopolia japonica PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.825e-30
Identity = 60/96 (62.50%), Postives = 73/96 (76.04%), Query Frame = 2
Query:  149 ATYKVKLITPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEMS 436
            ATYKVKL+TP+G  E +CPDD YILD AE+ G +LPYSCRAGSCS+CAGK            FL+DDQ+  G+VLTCVAYP SDV +ETHK+EE++
Sbjct:    1 ATYKVKLVTPDGPVEFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVIIETHKEEELT 96          
The following BLAST results are available for this feature:
BLAST of BQ623709 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
FER_DATST4.802e-3163.54Ferredoxin OS=Datura stramonium PE=1 SV=1[more]
FER_DATQU4.802e-3163.54Ferredoxin OS=Datura quercifolia PE=1 SV=1[more]
FER_CHLFR4.802e-3169.39Ferredoxin OS=Chlorogloeopsis fritschii PE=1 SV=2[more]
FER1_HYONI6.272e-3163.54Ferredoxin-1 OS=Hyoscyamus niger PE=1 SV=1[more]
FER_LYCCN8.192e-3163.54Ferredoxin OS=Lycium chinense PE=1 SV=1[more]
FER2_PHYAM8.192e-3160.42Ferredoxin-2 OS=Phytolacca americana PE=1 SV=1[more]
FER2_HYONI8.192e-3162.50Ferredoxin-2 OS=Hyoscyamus niger PE=1 SV=1[more]
FER_SOLNI1.070e-3062.50Ferredoxin OS=Solanum nigrum PE=1 SV=1[more]
FER_SOLLY1.397e-3063.16Ferredoxin OS=Solanum lyratum PE=1 SV=1[more]
FER_SCOJA1.825e-3062.50Ferredoxin OS=Scopolia japonica PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00800 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00800 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623709 ID=BQ623709; Name=BQ623709; organism=Citrus sinensis; type=EST; length=645bp
AATGGCCGCGCTCTCAAGCGCCATGGTCAGCACCTCATTCGTCAGAAACA
AGCCAACAGTGACAAGCCTCAAGGCCATGCCCAACATGGGTCAGGCTTTG
TTTGGCCTTAAAGCCAACAACAACAGAGGTGGACGTGTAATAGCCATGGC
TACATACAAAGTCAAGCTCATTACACCCGAGGGAGAGCAAGAAATTGAGT
GTCCTGATGACACATATATTCTTGATGCAGCTGAAGATGCTGGAATTGAT
CTCCCATATTCATGCAGGGCTGGTTCTTGCTCTACTTGTGCTGGGAAAGT
TGTCTCAGGTAGTGTTGACCAGTCAGATGGAAGCTTTCTTGAGGATGATC
AAATAGATGCAGGTTATGTTCTCACTTGTGTTGCTTATCCTACAAGTGAT
GTTACTGTTGAGACACACAAGGATGAAGAAATGTCTTAATTATGCGGCGC
TTTAATATAACATGGAGAATCTTGATATTATTATTATTAATATTGTGTCT
GGTTTGGTAATTTAGTGCCTTGTAAGGGGAATGTTGAAATATTGACGTGC
TTTCTTGAATGAGTAATATGAAAAGGGGGATTTTGCTCTGTACTTCCATT
TGCTGTCACAAATGAAGTCGCTGGAGCTTTACAATAATAAAGATA
back to top